RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 SHANK2Q9UPX8 1470 aa29.49■■■□□ 2.31
TPM4-204ENST00000586499 NPATQ14207 1427 aa29.49■■■□□ 2.31
TPM4-204ENST00000586499 WASHC2CQ9Y4E1 1318 aa29.47■■■□□ 2.31
TPM4-204ENST00000586499 PTPRKQ15262 1439 aa29.47■■■□□ 2.31
TPM4-204ENST00000586499 KIF15Q9NS87 1388 aa29.46■■■□□ 2.31
TPM4-204ENST00000586499 DUOX2Q9NRD8 1548 aa29.45■■■□□ 2.3
TPM4-204ENST00000586499 KDM5DQ9BY66 1539 aa29.44■■■□□ 2.3
TPM4-204ENST00000586499 FBXO31Q5XUX0 539 aaPredicted RBP29.42■■■□□ 2.3
TPM4-204ENST00000586499 RNF17Q9BXT8 1623 aaKnown RBP29.41■■■□□ 2.3
TPM4-204ENST00000586499 EIF2AK4Q9P2K8 1649 aaKnown RBP29.41■■■□□ 2.3
TPM4-204ENST00000586499 STRCQ7RTU9 1775 aa29.37■■■□□ 2.29
TPM4-204ENST00000586499 FAM135AQ9P2D6 1515 aa29.37■■■□□ 2.29
TPM4-204ENST00000586499 ANKRD30AQ9BXX3 1397 aa29.37■■■□□ 2.29
TPM4-204ENST00000586499 MROH1Q8NDA8 1641 aa29.36■■■□□ 2.29
TPM4-204ENST00000586499 NCOA1Q15788 1441 aa29.36■■■□□ 2.29
TPM4-204ENST00000586499 MYO3AQ8NEV4 1616 aa29.34■■■□□ 2.29
TPM4-204ENST00000586499 ERBINQ96RT1 1412 aa29.34■■■□□ 2.29
TPM4-204ENST00000586499 PZPP20742 1482 aa29.34■■■□□ 2.29
TPM4-204ENST00000586499 ABCC3O15438 1527 aa29.34■■■□□ 2.29
TPM4-204ENST00000586499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.31■■■□□ 2.283e-6■■□□□ 13.8
TPM4-204ENST00000586499 ADGRL2O95490 1459 aa29.29■■■□□ 2.28
TPM4-204ENST00000586499 TNRQ92752 1358 aa29.29■■■□□ 2.28
TPM4-204ENST00000586499 CEP170BQ9Y4F5 1589 aaPredicted RBP29.29■■■□□ 2.28
TPM4-204ENST00000586499 CAMSAP1Q5T5Y3 1602 aa29.28■■■□□ 2.28
TPM4-204ENST00000586499 ILDR1Q86SU0 546 aaPredicted RBP29.28■■■□□ 2.28
TPM4-204ENST00000586499 CEP152O94986 1710 aa29.28■■■□□ 2.28
TPM4-204ENST00000586499 ZC3H13Q5T200 1668 aaKnown RBP29.27■■■□□ 2.28
TPM4-204ENST00000586499 ZNF142P52746 1687 aaPredicted RBP29.26■■■□□ 2.27
TPM4-204ENST00000586499 DMRT2Q9Y5R5 561 aa29.26■■■□□ 2.27
TPM4-204ENST00000586499 ITGAEP38570 1179 aa29.24■■■□□ 2.27
TPM4-204ENST00000586499 PRDM15P57071 1507 aaPredicted RBP29.24■■■□□ 2.27
TPM4-204ENST00000586499 A2ML1A8K2U0 1454 aa29.23■■■□□ 2.27
TPM4-204ENST00000586499 NCKAP5LQ9HCH0 1330 aa29.22■■■□□ 2.27
TPM4-204ENST00000586499 DEPDC5O75140 1603 aa29.21■■■□□ 2.27
TPM4-204ENST00000586499 PTPRTO14522 1441 aa29.18■■■□□ 2.26
TPM4-204ENST00000586499 ANKRD50Q9ULJ7 1429 aa29.18■■■□□ 2.26
TPM4-204ENST00000586499 CFAP65Q6ZU64 1925 aaKnown RBP29.18■■■□□ 2.26
TPM4-204ENST00000586499 KANK1Q14678 1352 aa29.17■■■□□ 2.26
TPM4-204ENST00000586499 ERVK-7P63135 1459 aa29.17■■■□□ 2.26
TPM4-204ENST00000586499 SPATA31D1Q6ZQQ2 1576 aa29.16■■■□□ 2.26
TPM4-204ENST00000586499 PLA2R1Q13018 1463 aa29.15■■■□□ 2.26
TPM4-204ENST00000586499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.14■■■□□ 2.268e-48■■■■□ 23.3
TPM4-204ENST00000586499 ARHGAP31Q2M1Z3 1444 aa29.12■■■□□ 2.25
TPM4-204ENST00000586499 NLRP1Q9C000 1473 aa29.12■■■□□ 2.25
TPM4-204ENST00000586499 ROCK1Q13464 1354 aa29.12■■■□□ 2.25
TPM4-204ENST00000586499 VWDEQ8N2E2 1590 aa29.11■■■□□ 2.25
TPM4-204ENST00000586499 PKD2Q13563 968 aa29.11■■■□□ 2.25
TPM4-204ENST00000586499 CERKQ8TCT0 537 aa29.09■■■□□ 2.25
TPM4-204ENST00000586499 RRBP1Q9P2E9 1410 aaKnown RBP29.09■■■□□ 2.25
TPM4-204ENST00000586499 UGGT1Q9NYU2 1555 aa29.09■■■□□ 2.25
TPM4-204ENST00000586499 LMTK2Q8IWU2 1503 aa29.08■■■□□ 2.25
TPM4-204ENST00000586499 THEMISQ8N1K5 641 aaPredicted RBP29.07■■■□□ 2.24
TPM4-204ENST00000586499 FBXO41Q8TF61 875 aa29.06■■■□□ 2.24
TPM4-204ENST00000586499 ANKLE2Q86XL3 938 aa29■■■□□ 2.23
TPM4-204ENST00000586499 EFCAB6Q5THR3 1501 aa28.99■■■□□ 2.23
TPM4-204ENST00000586499 POLR1AO95602 1720 aaPredicted RBP28.97■■■□□ 2.23
TPM4-204ENST00000586499 ZNF335Q9H4Z2 1342 aaPredicted RBP28.97■■■□□ 2.23
TPM4-204ENST00000586499 UNC13BO14795 1591 aa28.97■■■□□ 2.23
TPM4-204ENST00000586499 NEURL4Q96JN8 1562 aa28.97■■■□□ 2.23
TPM4-204ENST00000586499 LTBP4Q8N2S1 1624 aa28.97■■■□□ 2.23
TPM4-204ENST00000586499 UBR1Q8IWV7 1749 aa28.95■■■□□ 2.23
TPM4-204ENST00000586499 IDI1Q13907 227 aa28.94■■■□□ 2.22
TPM4-204ENST00000586499 SYNMO15061 1565 aa28.93■■■□□ 2.22
TPM4-204ENST00000586499 NOS1P29475 1434 aa28.93■■■□□ 2.22
TPM4-204ENST00000586499 PIK3C2BO00750 1634 aa28.92■■■□□ 2.22
TPM4-204ENST00000586499 TET3O43151 1660 aa28.91■■■□□ 2.22
TPM4-204ENST00000586499 NUP155O75694 1391 aa28.9■■■□□ 2.22
TPM4-204ENST00000586499 NPHP4O75161 1426 aaPredicted RBP28.88■■■□□ 2.21
TPM4-204ENST00000586499 STAG3Q9UJ98 1225 aa28.88■■■□□ 2.21
TPM4-204ENST00000586499 MED14O60244 1454 aa28.87■■■□□ 2.21
TPM4-204ENST00000586499 RPRD2Q5VT52 1461 aaKnown RBP28.87■■■□□ 2.21
TPM4-204ENST00000586499 LTKP29376 864 aa28.86■■■□□ 2.21
TPM4-204ENST00000586499 IQGAP3Q86VI3 1631 aa28.86■■■□□ 2.21
TPM4-204ENST00000586499 GCC2Q8IWJ2 1684 aa28.86■■■□□ 2.21
TPM4-204ENST00000586499 NAIPQ13075 1403 aa28.85■■■□□ 2.21
TPM4-204ENST00000586499 TXNDC2Q86VQ3 553 aa28.84■■■□□ 2.21
TPM4-204ENST00000586499 ARHGAP23Q9P227 1491 aa28.84■■■□□ 2.21
TPM4-204ENST00000586499 SLC52A1Q9NWF4 448 aa28.83■■■□□ 2.21
TPM4-204ENST00000586499 E9PCH4 1651 aa28.83■■■□□ 2.21
TPM4-204ENST00000586499 SLIT1O75093 1534 aa28.82■■■□□ 2.2
TPM4-204ENST00000586499 IQGAP1P46940 1657 aa28.8■■■□□ 2.2
TPM4-204ENST00000586499 SCAF11Q99590 1463 aaKnown RBP28.8■■■□□ 2.2
TPM4-204ENST00000586499 TMEM2Q9UHN6 1383 aa28.8■■■□□ 2.2
TPM4-204ENST00000586499 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
TPM4-204ENST00000586499 ADGRB3O60242 1522 aa28.76■■■□□ 2.19
TPM4-204ENST00000586499 KDM5AP29375 1690 aaKnown RBP28.76■■■□□ 2.19
TPM4-204ENST00000586499 HFM1A2PYH4 1435 aa28.74■■■□□ 2.19
TPM4-204ENST00000586499 IQSEC2Q5JU85 1478 aa28.72■■■□□ 2.19
TPM4-204ENST00000586499 CHGAP10645 457 aaKnown RBP28.71■■■□□ 2.19
TPM4-204ENST00000586499 TRIM52Q96A61 297 aa28.69■■■□□ 2.18
TPM4-204ENST00000586499 MYO5BQ9ULV0 1848 aa28.69■■■□□ 2.18
TPM4-204ENST00000586499 TMEM131LA2VDJ0 1609 aa28.67■■■□□ 2.18
TPM4-204ENST00000586499 CPS1P31327 1500 aa28.66■■■□□ 2.18
TPM4-204ENST00000586499 SENP3Q9H4L4 574 aaPredicted RBP28.66■■■□□ 2.18
TPM4-204ENST00000586499 STRCP1A6NGW2 1772 aa28.65■■■□□ 2.18
TPM4-204ENST00000586499 UBAP1LF5GYI3 381 aa28.62■■■□□ 2.17
TPM4-204ENST00000586499 SLC26A8Q96RN1 970 aa28.62■■■□□ 2.17
TPM4-204ENST00000586499 ZFYVE9O95405 1425 aa28.61■■■□□ 2.17
TPM4-204ENST00000586499 RIMS2Q9UQ26 1411 aa28.61■■■□□ 2.17
TPM4-204ENST00000586499 SPHKAPQ2M3C7 1700 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms