RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 MROH1Q8NDA8 1641 aa19.21■□□□□ 0.67
RETREG3-203ENST00000585894 ERBINQ96RT1 1412 aa19.2■□□□□ 0.66
RETREG3-203ENST00000585894 C3P01024 1663 aa19.19■□□□□ 0.66
RETREG3-203ENST00000585894 CEBPAP49715 358 aaPredicted RBP19.19■□□□□ 0.66
RETREG3-203ENST00000585894 ROCK1Q13464 1354 aa19.18■□□□□ 0.66
RETREG3-203ENST00000585894 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
RETREG3-203ENST00000585894 ANKRD50Q9ULJ7 1429 aa19.17■□□□□ 0.66
RETREG3-203ENST00000585894 CEP152O94986 1710 aa19.16■□□□□ 0.66
RETREG3-203ENST00000585894 MROH2AA6NES4 1674 aa19.16■□□□□ 0.66
RETREG3-203ENST00000585894 DEPDC5O75140 1603 aa19.16■□□□□ 0.66
RETREG3-203ENST00000585894 KDM5DQ9BY66 1539 aa19.14■□□□□ 0.65
RETREG3-203ENST00000585894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
RETREG3-203ENST00000585894 CNTLNQ9NXG0 1405 aa19.13■□□□□ 0.65
RETREG3-203ENST00000585894 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
RETREG3-203ENST00000585894 PRDM15P57071 1507 aaPredicted RBP19.13■□□□□ 0.65
RETREG3-203ENST00000585894 ABCC3O15438 1527 aa19.12■□□□□ 0.65
RETREG3-203ENST00000585894 WASHC2CQ9Y4E1 1318 aa19.11■□□□□ 0.65
RETREG3-203ENST00000585894 ZMYM3Q14202 1370 aa19.11■□□□□ 0.65
RETREG3-203ENST00000585894 ZC3H13Q5T200 1668 aaKnown RBP19.1■□□□□ 0.65
RETREG3-203ENST00000585894 NAIPQ13075 1403 aa19.09■□□□□ 0.65
RETREG3-203ENST00000585894 CAMSAP1Q5T5Y3 1602 aa19.09■□□□□ 0.65
RETREG3-203ENST00000585894 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.65
RETREG3-203ENST00000585894 CFAP65Q6ZU64 1925 aaKnown RBP19.08■□□□□ 0.64
RETREG3-203ENST00000585894 UNC13BO14795 1591 aa19.08■□□□□ 0.64
RETREG3-203ENST00000585894 FAM135AQ9P2D6 1515 aa19.07■□□□□ 0.64
RETREG3-203ENST00000585894 HFM1A2PYH4 1435 aa19.06■□□□□ 0.64
RETREG3-203ENST00000585894 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
RETREG3-203ENST00000585894 KANK1Q14678 1352 aa19.03■□□□□ 0.64
RETREG3-203ENST00000585894 FBXO31Q5XUX0 539 aaPredicted RBP19.03■□□□□ 0.64
RETREG3-203ENST00000585894 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
RETREG3-203ENST00000585894 PZPP20742 1482 aa19.02■□□□□ 0.64
RETREG3-203ENST00000585894 SETD1BQ9UPS6 1966 aaKnown RBP19.01■□□□□ 0.63
RETREG3-203ENST00000585894 LMTK3Q96Q04 1460 aa18.99■□□□□ 0.63
RETREG3-203ENST00000585894 IQGAP3Q86VI3 1631 aa18.99■□□□□ 0.63
RETREG3-203ENST00000585894 LMTK2Q8IWU2 1503 aa18.99■□□□□ 0.63
RETREG3-203ENST00000585894 MYO3AQ8NEV4 1616 aa18.99■□□□□ 0.63
RETREG3-203ENST00000585894 EFCAB6Q5THR3 1501 aa18.98■□□□□ 0.63
RETREG3-203ENST00000585894 NPATQ14207 1427 aa18.98■□□□□ 0.63
RETREG3-203ENST00000585894 NUP155O75694 1391 aa18.98■□□□□ 0.63
RETREG3-203ENST00000585894 TET3O43151 1660 aa18.98■□□□□ 0.63
RETREG3-203ENST00000585894 ERVK-7P63135 1459 aa18.96■□□□□ 0.63
RETREG3-203ENST00000585894 UHRF1BP1Q6BDS2 1440 aa18.95■□□□□ 0.62
RETREG3-203ENST00000585894 E9PCH4 1651 aa18.95■□□□□ 0.62
RETREG3-203ENST00000585894 HSPA2P54652 639 aa18.94■□□□□ 0.62
RETREG3-203ENST00000585894 SPATA31D1Q6ZQQ2 1576 aa18.94■□□□□ 0.62
RETREG3-203ENST00000585894 TNRQ92752 1358 aa18.94■□□□□ 0.62
RETREG3-203ENST00000585894 ARHGAP31Q2M1Z3 1444 aa18.93■□□□□ 0.62
RETREG3-203ENST00000585894 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
RETREG3-203ENST00000585894 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
RETREG3-203ENST00000585894 ZNF142P52746 1687 aaPredicted RBP18.91■□□□□ 0.62
RETREG3-203ENST00000585894 CEP170BQ9Y4F5 1589 aaPredicted RBP18.9■□□□□ 0.62
RETREG3-203ENST00000585894 RAB3GAP2Q9H2M9 1393 aa18.9■□□□□ 0.62
RETREG3-203ENST00000585894 SYNMO15061 1565 aa18.9■□□□□ 0.62
RETREG3-203ENST00000585894 RPRD2Q5VT52 1461 aaKnown RBP18.86■□□□□ 0.61
RETREG3-203ENST00000585894 NOS1P29475 1434 aa18.85■□□□□ 0.61
RETREG3-203ENST00000585894 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
RETREG3-203ENST00000585894 PIK3C2BO00750 1634 aa18.84■□□□□ 0.61
RETREG3-203ENST00000585894 UGGT1Q9NYU2 1555 aa18.84■□□□□ 0.61
RETREG3-203ENST00000585894 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
RETREG3-203ENST00000585894 SPHKAPQ2M3C7 1700 aa18.83■□□□□ 0.61
RETREG3-203ENST00000585894 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
RETREG3-203ENST00000585894 STRCQ7RTU9 1775 aa18.82■□□□□ 0.6
RETREG3-203ENST00000585894 UBR1Q8IWV7 1749 aa18.82■□□□□ 0.6
RETREG3-203ENST00000585894 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
RETREG3-203ENST00000585894 PKD2Q13563 968 aa18.8■□□□□ 0.6
RETREG3-203ENST00000585894 MYO5BQ9ULV0 1848 aa18.8■□□□□ 0.6
RETREG3-203ENST00000585894 FOXD1Q16676 465 aa18.8■□□□□ 0.6
RETREG3-203ENST00000585894 IDI1Q13907 227 aa18.79■□□□□ 0.6
RETREG3-203ENST00000585894 MPHOSPH9Q99550 1183 aa18.77■□□□□ 0.6
RETREG3-203ENST00000585894 PTPRTO14522 1441 aa18.75■□□□□ 0.59
RETREG3-203ENST00000585894 PLA2R1Q13018 1463 aa18.75■□□□□ 0.59
RETREG3-203ENST00000585894 CLTCL1P53675 1640 aa18.74■□□□□ 0.59
RETREG3-203ENST00000585894 ADGRB3O60242 1522 aa18.74■□□□□ 0.59
RETREG3-203ENST00000585894 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
RETREG3-203ENST00000585894 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
RETREG3-203ENST00000585894 TRPM2O94759 1503 aa18.74■□□□□ 0.59
RETREG3-203ENST00000585894 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
RETREG3-203ENST00000585894 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
RETREG3-203ENST00000585894 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
RETREG3-203ENST00000585894 KDM5AP29375 1690 aaKnown RBP18.71■□□□□ 0.59
RETREG3-203ENST00000585894 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
RETREG3-203ENST00000585894 THEMISQ8N1K5 641 aaPredicted RBP18.71■□□□□ 0.59
RETREG3-203ENST00000585894 NEURL4Q96JN8 1562 aa18.69■□□□□ 0.58
RETREG3-203ENST00000585894 HRCP23327 699 aa18.69■□□□□ 0.58
RETREG3-203ENST00000585894 KIF1BO60333 1816 aa18.67■□□□□ 0.58
RETREG3-203ENST00000585894 SLIT1O75093 1534 aa18.67■□□□□ 0.58
RETREG3-203ENST00000585894 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
RETREG3-203ENST00000585894 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
RETREG3-203ENST00000585894 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
RETREG3-203ENST00000585894 LTKP29376 864 aa18.65■□□□□ 0.58
RETREG3-203ENST00000585894 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.57
RETREG3-203ENST00000585894 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
RETREG3-203ENST00000585894 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
RETREG3-203ENST00000585894 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
RETREG3-203ENST00000585894 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
RETREG3-203ENST00000585894 TXNDC2Q86VQ3 553 aa18.62■□□□□ 0.57
RETREG3-203ENST00000585894 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
RETREG3-203ENST00000585894 CCDC144AA2RUR9 1427 aa18.61■□□□□ 0.57
RETREG3-203ENST00000585894 NPHP4O75161 1426 aaPredicted RBP18.6■□□□□ 0.57
RETREG3-203ENST00000585894 ZFYVE9O95405 1425 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms