RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
SAFB2-202ENST00000585449 KIF15Q9NS87 1388 aa16.45■□□□□ 0.22
SAFB2-202ENST00000585449 NPATQ14207 1427 aa16.45■□□□□ 0.22
SAFB2-202ENST00000585449 SHANK2Q9UPX8 1470 aa16.43■□□□□ 0.22
SAFB2-202ENST00000585449 DNMT1P26358 1616 aaKnown RBP16.43■□□□□ 0.22
SAFB2-202ENST00000585449 DUOX2Q9NRD8 1548 aa16.42■□□□□ 0.22
SAFB2-202ENST00000585449 CROCC2H7BZ55 1655 aa16.4■□□□□ 0.22
SAFB2-202ENST00000585449 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
SAFB2-202ENST00000585449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.224e-14■■■□□ 16.7
SAFB2-202ENST00000585449 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
SAFB2-202ENST00000585449 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
SAFB2-202ENST00000585449 ITGAEP38570 1179 aa16.37■□□□□ 0.21
SAFB2-202ENST00000585449 ILDR1Q86SU0 546 aaPredicted RBP16.37■□□□□ 0.21
SAFB2-202ENST00000585449 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
SAFB2-202ENST00000585449 EIF2AK4Q9P2K8 1649 aaKnown RBP16.37■□□□□ 0.21
SAFB2-202ENST00000585449 ERBINQ96RT1 1412 aa16.36■□□□□ 0.21
SAFB2-202ENST00000585449 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
SAFB2-202ENST00000585449 TNRQ92752 1358 aa16.36■□□□□ 0.21
SAFB2-202ENST00000585449 STRCQ7RTU9 1775 aa16.36■□□□□ 0.21
SAFB2-202ENST00000585449 PZPP20742 1482 aa16.35■□□□□ 0.21
SAFB2-202ENST00000585449 ABCC3O15438 1527 aa16.35■□□□□ 0.21
SAFB2-202ENST00000585449 MROH1Q8NDA8 1641 aa16.35■□□□□ 0.21
SAFB2-202ENST00000585449 NCKAP5LQ9HCH0 1330 aa16.35■□□□□ 0.21
SAFB2-202ENST00000585449 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
SAFB2-202ENST00000585449 ADGRL2O95490 1459 aa16.33■□□□□ 0.2
SAFB2-202ENST00000585449 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
SAFB2-202ENST00000585449 MYO3AQ8NEV4 1616 aa16.33■□□□□ 0.2
SAFB2-202ENST00000585449 CEP170BQ9Y4F5 1589 aaPredicted RBP16.31■□□□□ 0.2
SAFB2-202ENST00000585449 A2ML1A8K2U0 1454 aa16.3■□□□□ 0.2
SAFB2-202ENST00000585449 CEP152O94986 1710 aa16.3■□□□□ 0.2
SAFB2-202ENST00000585449 ANKRD50Q9ULJ7 1429 aa16.29■□□□□ 0.2
SAFB2-202ENST00000585449 KANK1Q14678 1352 aa16.29■□□□□ 0.2
SAFB2-202ENST00000585449 PTPRTO14522 1441 aa16.28■□□□□ 0.2
SAFB2-202ENST00000585449 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
SAFB2-202ENST00000585449 ZC3H13Q5T200 1668 aaKnown RBP16.27■□□□□ 0.2
SAFB2-202ENST00000585449 CFAP65Q6ZU64 1925 aaKnown RBP16.27■□□□□ 0.2
SAFB2-202ENST00000585449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.27■□□□□ 0.2
SAFB2-202ENST00000585449 PKD2Q13563 968 aa16.27■□□□□ 0.2
SAFB2-202ENST00000585449 CERKQ8TCT0 537 aa16.27■□□□□ 0.2
SAFB2-202ENST00000585449 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.19
SAFB2-202ENST00000585449 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
SAFB2-202ENST00000585449 ERVK-7P63135 1459 aa16.26■□□□□ 0.19
SAFB2-202ENST00000585449 DEPDC5O75140 1603 aa16.26■□□□□ 0.19
SAFB2-202ENST00000585449 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
SAFB2-202ENST00000585449 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
SAFB2-202ENST00000585449 SPATA31D1Q6ZQQ2 1576 aa16.25■□□□□ 0.19
SAFB2-202ENST00000585449 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
SAFB2-202ENST00000585449 NLRP1Q9C000 1473 aa16.24■□□□□ 0.19
SAFB2-202ENST00000585449 FBXO41Q8TF61 875 aa16.24■□□□□ 0.19
SAFB2-202ENST00000585449 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
SAFB2-202ENST00000585449 VWDEQ8N2E2 1590 aa16.22■□□□□ 0.19
SAFB2-202ENST00000585449 ANKLE2Q86XL3 938 aa16.22■□□□□ 0.19
SAFB2-202ENST00000585449 UGGT1Q9NYU2 1555 aa16.21■□□□□ 0.19
SAFB2-202ENST00000585449 LMTK2Q8IWU2 1503 aa16.21■□□□□ 0.19
SAFB2-202ENST00000585449 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
SAFB2-202ENST00000585449 IDI1Q13907 227 aa16.19■□□□□ 0.18
SAFB2-202ENST00000585449 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
SAFB2-202ENST00000585449 NUP155O75694 1391 aa16.15■□□□□ 0.18
SAFB2-202ENST00000585449 LTKP29376 864 aa16.15■□□□□ 0.18
SAFB2-202ENST00000585449 NOS1P29475 1434 aa16.15■□□□□ 0.18
SAFB2-202ENST00000585449 LTBP4Q8N2S1 1624 aa16.15■□□□□ 0.18
SAFB2-202ENST00000585449 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.18
SAFB2-202ENST00000585449 TXNDC2Q86VQ3 553 aa16.14■□□□□ 0.17
SAFB2-202ENST00000585449 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
SAFB2-202ENST00000585449 UNC13BO14795 1591 aa16.13■□□□□ 0.17
SAFB2-202ENST00000585449 NPHP4O75161 1426 aaPredicted RBP16.12■□□□□ 0.17
SAFB2-202ENST00000585449 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
SAFB2-202ENST00000585449 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
SAFB2-202ENST00000585449 SYNMO15061 1565 aa16.12■□□□□ 0.17
SAFB2-202ENST00000585449 PIK3C2BO00750 1634 aa16.11■□□□□ 0.17
SAFB2-202ENST00000585449 POLR1AO95602 1720 aaPredicted RBP16.11■□□□□ 0.17
SAFB2-202ENST00000585449 NAIPQ13075 1403 aa16.11■□□□□ 0.17
SAFB2-202ENST00000585449 MED14O60244 1454 aa16.1■□□□□ 0.17
SAFB2-202ENST00000585449 TET3O43151 1660 aa16.1■□□□□ 0.17
SAFB2-202ENST00000585449 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
SAFB2-202ENST00000585449 EID1Q9Y6B2 187 aa16.09■□□□□ 0.17
SAFB2-202ENST00000585449 TMEM2Q9UHN6 1383 aa16.09■□□□□ 0.17
SAFB2-202ENST00000585449 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.16
SAFB2-202ENST00000585449 CHGAP10645 457 aaKnown RBP16.07■□□□□ 0.16
SAFB2-202ENST00000585449 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
SAFB2-202ENST00000585449 SLIT1O75093 1534 aa16.07■□□□□ 0.16
SAFB2-202ENST00000585449 IQGAP3Q86VI3 1631 aa16.07■□□□□ 0.16
SAFB2-202ENST00000585449 E9PCH4 1651 aa16.06■□□□□ 0.16
SAFB2-202ENST00000585449 GCC2Q8IWJ2 1684 aa16.06■□□□□ 0.16
SAFB2-202ENST00000585449 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
SAFB2-202ENST00000585449 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
SAFB2-202ENST00000585449 HFM1A2PYH4 1435 aa16.04■□□□□ 0.16
SAFB2-202ENST00000585449 IQGAP1P46940 1657 aa16.03■□□□□ 0.16
SAFB2-202ENST00000585449 ADGRB3O60242 1522 aa16.01■□□□□ 0.15
SAFB2-202ENST00000585449 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
SAFB2-202ENST00000585449 BCANQ96GW7 911 aa16.01■□□□□ 0.15
SAFB2-202ENST00000585449 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
SAFB2-202ENST00000585449 IQSEC2Q5JU85 1478 aa16■□□□□ 0.15
SAFB2-202ENST00000585449 UBAP1LF5GYI3 381 aa16■□□□□ 0.15
SAFB2-202ENST00000585449 KDM5AP29375 1690 aaKnown RBP15.99■□□□□ 0.15
SAFB2-202ENST00000585449 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
SAFB2-202ENST00000585449 HDGFP51858 240 aaKnown RBP15.98■□□□□ 0.15
SAFB2-202ENST00000585449 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
SAFB2-202ENST00000585449 RIMS2Q9UQ26 1411 aa15.98■□□□□ 0.15
SAFB2-202ENST00000585449 CPS1P31327 1500 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms