RNA–Protein interactions for RNA: ENST00000585089.5

IFT20-214, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-214ENST00000585089 VWDEQ8N2E2 1590 aa24.1■■□□□ 1.45
IFT20-214ENST00000585089 ALKQ9UM73 1620 aa24.09■■□□□ 1.45
IFT20-214ENST00000585089 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
IFT20-214ENST00000585089 FYCO1Q9BQS8 1478 aa24.07■■□□□ 1.44
IFT20-214ENST00000585089 THEMISQ8N1K5 641 aaPredicted RBP24.05■■□□□ 1.44
IFT20-214ENST00000585089 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
IFT20-214ENST00000585089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.04■■□□□ 1.44
IFT20-214ENST00000585089 NPHP4O75161 1426 aaPredicted RBP24.04■■□□□ 1.44
IFT20-214ENST00000585089 FBXO31Q5XUX0 539 aaPredicted RBP24.04■■□□□ 1.44
IFT20-214ENST00000585089 DEPDC5O75140 1603 aa24.03■■□□□ 1.44
IFT20-214ENST00000585089 PZPP20742 1482 aa24.02■■□□□ 1.44
IFT20-214ENST00000585089 MED14O60244 1454 aa24.01■■□□□ 1.43
IFT20-214ENST00000585089 KDM5DQ9BY66 1539 aa24■■□□□ 1.43
IFT20-214ENST00000585089 FAM135AQ9P2D6 1515 aa24■■□□□ 1.43
IFT20-214ENST00000585089 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
IFT20-214ENST00000585089 IQGAP1P46940 1657 aa23.99■■□□□ 1.43
IFT20-214ENST00000585089 DHX29Q7Z478 1369 aaKnown RBP23.99■■□□□ 1.43
IFT20-214ENST00000585089 NLRP1Q9C000 1473 aa23.99■■□□□ 1.43
IFT20-214ENST00000585089 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
IFT20-214ENST00000585089 RTEL1-TNFRSF6BF6WH68 1400 aa23.97■■□□□ 1.43
IFT20-214ENST00000585089 SYNMO15061 1565 aa23.97■■□□□ 1.43
IFT20-214ENST00000585089 KIF3BO15066 747 aa23.97■■□□□ 1.43
IFT20-214ENST00000585089 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
IFT20-214ENST00000585089 LRRC7Q96NW7 1537 aa23.96■■□□□ 1.43
IFT20-214ENST00000585089 MIA2Q96PC5 1412 aa23.96■■□□□ 1.43
IFT20-214ENST00000585089 WASHC2CQ9Y4E1 1318 aa23.95■■□□□ 1.42
IFT20-214ENST00000585089 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
IFT20-214ENST00000585089 ZNF644Q9H582 1327 aaPredicted RBP23.91■■□□□ 1.42
IFT20-214ENST00000585089 MBD5Q9P267 1494 aa23.91■■□□□ 1.42
IFT20-214ENST00000585089 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
IFT20-214ENST00000585089 TIAM1Q13009 1591 aa23.87■■□□□ 1.41
IFT20-214ENST00000585089 ZC3H13Q5T200 1668 aaKnown RBP23.82■■□□□ 1.4
IFT20-214ENST00000585089 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
IFT20-214ENST00000585089 POTEAQ6S8J7 498 aa23.8■■□□□ 1.4
IFT20-214ENST00000585089 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
IFT20-214ENST00000585089 RSPH4AQ5TD94 716 aa23.77■■□□□ 1.4
IFT20-214ENST00000585089 EHBP1L1Q8N3D4 1523 aa23.77■■□□□ 1.4
IFT20-214ENST00000585089 FAM135BQ49AJ0 1406 aa23.75■■□□□ 1.39
IFT20-214ENST00000585089 SCAF11Q99590 1463 aaKnown RBP23.75■■□□□ 1.39
IFT20-214ENST00000585089 UBR1Q8IWV7 1749 aa23.74■■□□□ 1.39
IFT20-214ENST00000585089 CFAP65Q6ZU64 1925 aaKnown RBP23.73■■□□□ 1.39
IFT20-214ENST00000585089 ERVK-7P63135 1459 aa23.73■■□□□ 1.39
IFT20-214ENST00000585089 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
IFT20-214ENST00000585089 CEP162Q5TB80 1403 aa23.72■■□□□ 1.39
IFT20-214ENST00000585089 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
IFT20-214ENST00000585089 ABCC3O15438 1527 aa23.72■■□□□ 1.39
IFT20-214ENST00000585089 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.38
IFT20-214ENST00000585089 TSPY4P0CV99 314 aa23.69■■□□□ 1.38
IFT20-214ENST00000585089 TSPY10P0CW01 314 aa23.69■■□□□ 1.38
IFT20-214ENST00000585089 TXNDC2Q86VQ3 553 aa23.69■■□□□ 1.38
IFT20-214ENST00000585089 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
IFT20-214ENST00000585089 LTKP29376 864 aa23.66■■□□□ 1.38
IFT20-214ENST00000585089 ROBO1Q9Y6N7 1651 aa23.66■■□□□ 1.38
IFT20-214ENST00000585089 SLIT1O75093 1534 aa23.65■■□□□ 1.38
IFT20-214ENST00000585089 NCOA2Q15596 1464 aa23.65■■□□□ 1.38
IFT20-214ENST00000585089 ARHGAP23Q9P227 1491 aa23.65■■□□□ 1.38
IFT20-214ENST00000585089 EID1Q9Y6B2 187 aa23.65■■□□□ 1.38
IFT20-214ENST00000585089 CEP152O94986 1710 aa23.64■■□□□ 1.37
IFT20-214ENST00000585089 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
IFT20-214ENST00000585089 TMEM94Q12767 1356 aa23.61■■□□□ 1.37
IFT20-214ENST00000585089 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
IFT20-214ENST00000585089 MROH1Q8NDA8 1641 aa23.58■■□□□ 1.36
IFT20-214ENST00000585089 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
IFT20-214ENST00000585089 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
IFT20-214ENST00000585089 PHLPP1O60346 1717 aa23.55■■□□□ 1.36
IFT20-214ENST00000585089 KCNA6P17658 529 aa23.54■■□□□ 1.36
IFT20-214ENST00000585089 JCADQ9P266 1359 aa23.53■■□□□ 1.36
IFT20-214ENST00000585089 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
IFT20-214ENST00000585089 PIK3C2BO00750 1634 aa23.52■■□□□ 1.36
IFT20-214ENST00000585089 STAG3Q9UJ98 1225 aa23.52■■□□□ 1.36
IFT20-214ENST00000585089 MAP3K1Q13233 1512 aa23.52■■□□□ 1.36
IFT20-214ENST00000585089 UPF1Q92900 1129 aaKnown RBP eCLIP23.5■■□□□ 1.35
IFT20-214ENST00000585089 ARHGAP31Q2M1Z3 1444 aa23.5■■□□□ 1.35
IFT20-214ENST00000585089 MSH6P52701 1360 aa23.49■■□□□ 1.35
IFT20-214ENST00000585089 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
IFT20-214ENST00000585089 PRDM15P57071 1507 aaPredicted RBP23.48■■□□□ 1.35
IFT20-214ENST00000585089 NKTRP30414 1462 aaKnown RBP23.47■■□□□ 1.35
IFT20-214ENST00000585089 KDM5AP29375 1690 aaKnown RBP23.46■■□□□ 1.35
IFT20-214ENST00000585089 DUOX2Q9NRD8 1548 aa23.46■■□□□ 1.35
IFT20-214ENST00000585089 SLAIN2Q9P270 581 aa23.46■■□□□ 1.35
IFT20-214ENST00000585089 EFCAB6Q5THR3 1501 aa23.45■■□□□ 1.34
IFT20-214ENST00000585089 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
IFT20-214ENST00000585089 SLC26A8Q96RN1 970 aa23.45■■□□□ 1.34
IFT20-214ENST00000585089 MEX3CQ5U5Q3 659 aaKnown RBP23.44■■□□□ 1.34
IFT20-214ENST00000585089 TRIM52Q96A61 297 aa23.44■■□□□ 1.34
IFT20-214ENST00000585089 TET3O43151 1660 aa23.44■■□□□ 1.34
IFT20-214ENST00000585089 NWD1Q149M9 1564 aa23.43■■□□□ 1.34
IFT20-214ENST00000585089 SPATA31A6Q5VVP1 1343 aa23.41■■□□□ 1.34
IFT20-214ENST00000585089 COL16A1Q07092 1604 aaPredicted RBP23.41■■□□□ 1.34
IFT20-214ENST00000585089 BCANQ96GW7 911 aa23.39■■□□□ 1.33
IFT20-214ENST00000585089 LRP6O75581 1613 aa23.38■■□□□ 1.33
IFT20-214ENST00000585089 FGD6Q6ZV73 1430 aa23.37■■□□□ 1.33
IFT20-214ENST00000585089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.37■■□□□ 1.333e-6■■□□□ 11.7
IFT20-214ENST00000585089 IDI1Q13907 227 aa23.36■■□□□ 1.33
IFT20-214ENST00000585089 KANK1Q14678 1352 aa23.36■■□□□ 1.33
IFT20-214ENST00000585089 RXRBP28702 533 aa23.35■■□□□ 1.33
IFT20-214ENST00000585089 ERBINQ96RT1 1412 aa23.34■■□□□ 1.33
IFT20-214ENST00000585089 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
IFT20-214ENST00000585089 CHD2O14647 1828 aaKnown RBP23.33■■□□□ 1.32
IFT20-214ENST00000585089 MYOM3Q5VTT5 1437 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms