RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 KIF3BO15066 747 aa23.43■■□□□ 1.34
CDC6-204ENST00000580824 MROH2AA6NES4 1674 aa23.43■■□□□ 1.34
CDC6-204ENST00000580824 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
CDC6-204ENST00000580824 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
CDC6-204ENST00000580824 MROH1Q8NDA8 1641 aa23.4■■□□□ 1.34
CDC6-204ENST00000580824 PRDM15P57071 1507 aaPredicted RBP23.39■■□□□ 1.34
CDC6-204ENST00000580824 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
CDC6-204ENST00000580824 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
CDC6-204ENST00000580824 GGT6Q6P531 493 aa23.38■■□□□ 1.33
CDC6-204ENST00000580824 ESF1Q9H501 851 aaKnown RBP23.37■■□□□ 1.33
CDC6-204ENST00000580824 ITGAEP38570 1179 aa23.36■■□□□ 1.33
CDC6-204ENST00000580824 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
CDC6-204ENST00000580824 C3P01024 1663 aa23.34■■□□□ 1.33
CDC6-204ENST00000580824 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
CDC6-204ENST00000580824 ABCC3O15438 1527 aa23.32■■□□□ 1.32
CDC6-204ENST00000580824 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
CDC6-204ENST00000580824 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
CDC6-204ENST00000580824 ZMYM3Q14202 1370 aa23.3■■□□□ 1.32
CDC6-204ENST00000580824 UNC13BO14795 1591 aa23.3■■□□□ 1.32
CDC6-204ENST00000580824 SETD1BQ9UPS6 1966 aaKnown RBP23.29■■□□□ 1.32
CDC6-204ENST00000580824 NAIPQ13075 1403 aa23.29■■□□□ 1.32
CDC6-204ENST00000580824 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
CDC6-204ENST00000580824 NPATQ14207 1427 aa23.28■■□□□ 1.32
CDC6-204ENST00000580824 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
CDC6-204ENST00000580824 KANK1Q14678 1352 aa23.27■■□□□ 1.32
CDC6-204ENST00000580824 PZPP20742 1482 aa23.25■■□□□ 1.31
CDC6-204ENST00000580824 CEP152O94986 1710 aa23.25■■□□□ 1.31
CDC6-204ENST00000580824 CAMSAP1Q5T5Y3 1602 aa23.24■■□□□ 1.31
CDC6-204ENST00000580824 ARHGAP31Q2M1Z3 1444 aa23.23■■□□□ 1.31
CDC6-204ENST00000580824 CEBPAP49715 358 aaPredicted RBP23.21■■□□□ 1.31
CDC6-204ENST00000580824 PREX1Q8TCU6 1659 aa23.2■■□□□ 1.3
CDC6-204ENST00000580824 IQGAP3Q86VI3 1631 aa23.2■■□□□ 1.3
CDC6-204ENST00000580824 TET3O43151 1660 aa23.18■■□□□ 1.3
CDC6-204ENST00000580824 EFCAB6Q5THR3 1501 aa23.18■■□□□ 1.3
CDC6-204ENST00000580824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.17■■□□□ 1.37e-9■■■□□ 18.4
CDC6-204ENST00000580824 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
CDC6-204ENST00000580824 ACIN1Q9UKV3 1341 aaKnown RBP23.15■■□□□ 1.3
CDC6-204ENST00000580824 RPRD2Q5VT52 1461 aaKnown RBP23.15■■□□□ 1.3
CDC6-204ENST00000580824 LMTK3Q96Q04 1460 aa23.14■■□□□ 1.29
CDC6-204ENST00000580824 UHRF1BP1Q6BDS2 1440 aa23.13■■□□□ 1.29
CDC6-204ENST00000580824 NUP155O75694 1391 aa23.13■■□□□ 1.29
CDC6-204ENST00000580824 ERVK-7P63135 1459 aa23.12■■□□□ 1.29
CDC6-204ENST00000580824 PLPPR3Q6T4P5 718 aa23.12■■□□□ 1.29
CDC6-204ENST00000580824 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
CDC6-204ENST00000580824 ZNF142P52746 1687 aaPredicted RBP23.1■■□□□ 1.29
CDC6-204ENST00000580824 SETD5Q9C0A6 1442 aa23.1■■□□□ 1.29
CDC6-204ENST00000580824 TNRQ92752 1358 aa23.1■■□□□ 1.29
CDC6-204ENST00000580824 NLRP1Q9C000 1473 aa23.07■■□□□ 1.28
CDC6-204ENST00000580824 FBXO31Q5XUX0 539 aaPredicted RBP23.07■■□□□ 1.28
CDC6-204ENST00000580824 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
CDC6-204ENST00000580824 E9PCH4 1651 aa23.05■■□□□ 1.28
CDC6-204ENST00000580824 NOS1P29475 1434 aa23.05■■□□□ 1.28
CDC6-204ENST00000580824 CFAP65Q6ZU64 1925 aaKnown RBP23.04■■□□□ 1.28
CDC6-204ENST00000580824 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
CDC6-204ENST00000580824 HRCP23327 699 aa23.01■■□□□ 1.27
CDC6-204ENST00000580824 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
CDC6-204ENST00000580824 SYNMO15061 1565 aa22.99■■□□□ 1.27
CDC6-204ENST00000580824 KDM5AP29375 1690 aaKnown RBP22.97■■□□□ 1.27
CDC6-204ENST00000580824 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
CDC6-204ENST00000580824 PTPRTO14522 1441 aa22.95■■□□□ 1.26
CDC6-204ENST00000580824 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
CDC6-204ENST00000580824 PLA2R1Q13018 1463 aa22.95■■□□□ 1.26
CDC6-204ENST00000580824 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
CDC6-204ENST00000580824 SLC52A1Q9NWF4 448 aa22.94■■□□□ 1.26
CDC6-204ENST00000580824 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
CDC6-204ENST00000580824 UGGT1Q9NYU2 1555 aa22.93■■□□□ 1.26
CDC6-204ENST00000580824 UBR1Q8IWV7 1749 aa22.92■■□□□ 1.26
CDC6-204ENST00000580824 HSPA2P54652 639 aa22.91■■□□□ 1.26
CDC6-204ENST00000580824 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
CDC6-204ENST00000580824 TRPM2O94759 1503 aa22.9■■□□□ 1.26
CDC6-204ENST00000580824 PKD2Q13563 968 aa22.88■■□□□ 1.25
CDC6-204ENST00000580824 THEMISQ8N1K5 641 aaPredicted RBP22.88■■□□□ 1.25
CDC6-204ENST00000580824 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
CDC6-204ENST00000580824 STRCQ7RTU9 1775 aa22.87■■□□□ 1.25
CDC6-204ENST00000580824 IDI1Q13907 227 aa22.87■■□□□ 1.25
CDC6-204ENST00000580824 MPHOSPH9Q99550 1183 aa22.87■■□□□ 1.25
CDC6-204ENST00000580824 SLIT1O75093 1534 aa22.84■■□□□ 1.25
CDC6-204ENST00000580824 ARHGAP23Q9P227 1491 aa22.83■■□□□ 1.25
CDC6-204ENST00000580824 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
CDC6-204ENST00000580824 POLR1AO95602 1720 aaPredicted RBP22.82■■□□□ 1.24
CDC6-204ENST00000580824 CLTCL1P53675 1640 aa22.79■■□□□ 1.24
CDC6-204ENST00000580824 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
CDC6-204ENST00000580824 TMEM2Q9UHN6 1383 aa22.78■■□□□ 1.24
CDC6-204ENST00000580824 STAG3Q9UJ98 1225 aa22.77■■□□□ 1.24
CDC6-204ENST00000580824 MED14O60244 1454 aa22.77■■□□□ 1.24
CDC6-204ENST00000580824 MYO5BQ9ULV0 1848 aa22.76■■□□□ 1.23
CDC6-204ENST00000580824 NEURL4Q96JN8 1562 aa22.76■■□□□ 1.23
CDC6-204ENST00000580824 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
CDC6-204ENST00000580824 KIF1BO60333 1816 aa22.75■■□□□ 1.23
CDC6-204ENST00000580824 SCAF11Q99590 1463 aaKnown RBP22.74■■□□□ 1.23
CDC6-204ENST00000580824 CCDC144AA2RUR9 1427 aa22.73■■□□□ 1.23
CDC6-204ENST00000580824 ZFYVE9O95405 1425 aa22.72■■□□□ 1.23
CDC6-204ENST00000580824 FOXD1Q16676 465 aa22.71■■□□□ 1.23
CDC6-204ENST00000580824 NCKAP5LQ9HCH0 1330 aa22.7■■□□□ 1.22
CDC6-204ENST00000580824 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
CDC6-204ENST00000580824 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
CDC6-204ENST00000580824 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
CDC6-204ENST00000580824 NPHP4O75161 1426 aaPredicted RBP22.68■■□□□ 1.22
CDC6-204ENST00000580824 RIMS2Q9UQ26 1411 aa22.67■■□□□ 1.22
CDC6-204ENST00000580824 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms