RNA–Protein interactions for RNA: ENST00000580755.1

RPL23A-208, Transcript of ribosomal protein L23a, humanhuman

TSL 2

Gene RPL23A, Length 412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-208ENST00000580755 HNRNPMP52272 730 aaKnown RBP eCLIP25.85■■□□□ 1.73
RPL23A-208ENST00000580755 CFDP1Q9UEE9 299 aaPredicted RBP25.84■■□□□ 1.73
RPL23A-208ENST00000580755 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
RPL23A-208ENST00000580755 MED14O60244 1454 aa25.82■■□□□ 1.72
RPL23A-208ENST00000580755 LRRC7Q96NW7 1537 aa25.82■■□□□ 1.72
RPL23A-208ENST00000580755 DEPDC5O75140 1603 aa25.81■■□□□ 1.72
RPL23A-208ENST00000580755 A2MP01023 1474 aa25.81■■□□□ 1.72
RPL23A-208ENST00000580755 ANKLE2Q86XL3 938 aa25.81■■□□□ 1.72
RPL23A-208ENST00000580755 ATP7AQ04656 1500 aa25.8■■□□□ 1.72
RPL23A-208ENST00000580755 SETD1AO15047 1707 aaKnown RBP25.8■■□□□ 1.72
RPL23A-208ENST00000580755 NPHP4O75161 1426 aaPredicted RBP25.8■■□□□ 1.72
RPL23A-208ENST00000580755 MTUS2Q5JR59 1369 aa25.79■■□□□ 1.72
RPL23A-208ENST00000580755 GGT6Q6P531 493 aa25.77■■□□□ 1.72
RPL23A-208ENST00000580755 TNRQ92752 1358 aa25.76■■□□□ 1.71
RPL23A-208ENST00000580755 INO80Q9ULG1 1556 aaPredicted RBP25.76■■□□□ 1.71
RPL23A-208ENST00000580755 IQGAP1P46940 1657 aa25.75■■□□□ 1.71
RPL23A-208ENST00000580755 STRCP1A6NGW2 1772 aa25.74■■□□□ 1.71
RPL23A-208ENST00000580755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.74■■□□□ 1.714e-6■□□□□ 8.2
RPL23A-208ENST00000580755 THEMISQ8N1K5 641 aaPredicted RBP25.7■■□□□ 1.7
RPL23A-208ENST00000580755 EHBP1L1Q8N3D4 1523 aa25.68■■□□□ 1.7
RPL23A-208ENST00000580755 FAM135AQ9P2D6 1515 aa25.68■■□□□ 1.7
RPL23A-208ENST00000580755 PZPP20742 1482 aa25.67■■□□□ 1.7
RPL23A-208ENST00000580755 NLRP1Q9C000 1473 aa25.67■■□□□ 1.7
RPL23A-208ENST00000580755 UGGT1Q9NYU2 1555 aa25.67■■□□□ 1.7
RPL23A-208ENST00000580755 ADGBQ8N7X0 1667 aa25.67■■□□□ 1.7
RPL23A-208ENST00000580755 CEP162Q5TB80 1403 aa25.66■■□□□ 1.7
RPL23A-208ENST00000580755 MBD5Q9P267 1494 aa25.66■■□□□ 1.7
RPL23A-208ENST00000580755 ZNF644Q9H582 1327 aaPredicted RBP25.65■■□□□ 1.7
RPL23A-208ENST00000580755 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
RPL23A-208ENST00000580755 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
RPL23A-208ENST00000580755 FAM135BQ49AJ0 1406 aa25.63■■□□□ 1.69
RPL23A-208ENST00000580755 FBXO31Q5XUX0 539 aaPredicted RBP25.61■■□□□ 1.69
RPL23A-208ENST00000580755 UPF1Q92900 1129 aaKnown RBP eCLIP25.61■■□□□ 1.69
RPL23A-208ENST00000580755 KDM5DQ9BY66 1539 aa25.59■■□□□ 1.69
RPL23A-208ENST00000580755 DHX29Q7Z478 1369 aaKnown RBP25.58■■□□□ 1.69
RPL23A-208ENST00000580755 MIA2Q96PC5 1412 aa25.57■■□□□ 1.68
RPL23A-208ENST00000580755 RSPH4AQ5TD94 716 aa25.57■■□□□ 1.68
RPL23A-208ENST00000580755 ZC3H13Q5T200 1668 aaKnown RBP25.55■■□□□ 1.68
RPL23A-208ENST00000580755 SRCAPQ6ZRS2 3230 aa25.55■■□□□ 1.68
RPL23A-208ENST00000580755 XIRP1Q702N8 1843 aaKnown RBP25.53■■□□□ 1.68
RPL23A-208ENST00000580755 NCOA2Q15596 1464 aa25.52■■□□□ 1.68
RPL23A-208ENST00000580755 CCDC141Q6ZP82 1450 aa25.52■■□□□ 1.68
RPL23A-208ENST00000580755 KIF3BO15066 747 aa25.49■■□□□ 1.67
RPL23A-208ENST00000580755 CAMSAP2Q08AD1 1489 aa25.48■■□□□ 1.67
RPL23A-208ENST00000580755 ROBO1Q9Y6N7 1651 aa25.48■■□□□ 1.67
RPL23A-208ENST00000580755 WASHC2CQ9Y4E1 1318 aa25.43■■□□□ 1.66
RPL23A-208ENST00000580755 LRRC9Q6ZRR7 1453 aa25.43■■□□□ 1.66
RPL23A-208ENST00000580755 SCAF11Q99590 1463 aaKnown RBP25.42■■□□□ 1.66
RPL23A-208ENST00000580755 TSPY4P0CV99 314 aa25.42■■□□□ 1.66
RPL23A-208ENST00000580755 TSPY10P0CW01 314 aa25.42■■□□□ 1.66
RPL23A-208ENST00000580755 ARHGEF5Q12774 1597 aa25.42■■□□□ 1.66
RPL23A-208ENST00000580755 JCADQ9P266 1359 aa25.41■■□□□ 1.66
RPL23A-208ENST00000580755 ZNF772Q68DY9 489 aaPredicted RBP25.37■■□□□ 1.65
RPL23A-208ENST00000580755 TRIM52Q96A61 297 aa25.36■■□□□ 1.65
RPL23A-208ENST00000580755 VPS8Q8N3P4 1428 aa25.36■■□□□ 1.65
RPL23A-208ENST00000580755 PHLPP1O60346 1717 aa25.34■■□□□ 1.65
RPL23A-208ENST00000580755 TMEM94Q12767 1356 aa25.33■■□□□ 1.65
RPL23A-208ENST00000580755 UBR1Q8IWV7 1749 aa25.33■■□□□ 1.65
RPL23A-208ENST00000580755 CDK12Q9NYV4 1490 aaPredicted RBP25.33■■□□□ 1.65
RPL23A-208ENST00000580755 MAP3K1Q13233 1512 aa25.32■■□□□ 1.64
RPL23A-208ENST00000580755 MAST1Q9Y2H9 1570 aa25.31■■□□□ 1.64
RPL23A-208ENST00000580755 ARHGAP23Q9P227 1491 aa25.3■■□□□ 1.64
RPL23A-208ENST00000580755 SLIT1O75093 1534 aa25.3■■□□□ 1.64
RPL23A-208ENST00000580755 ERVK-7P63135 1459 aa25.28■■□□□ 1.64
RPL23A-208ENST00000580755 LRP6O75581 1613 aa25.28■■□□□ 1.64
RPL23A-208ENST00000580755 SPATA31A6Q5VVP1 1343 aa25.28■■□□□ 1.64
RPL23A-208ENST00000580755 RXRBP28702 533 aa25.25■■□□□ 1.63
RPL23A-208ENST00000580755 MEX3CQ5U5Q3 659 aaKnown RBP25.25■■□□□ 1.63
RPL23A-208ENST00000580755 COL16A1Q07092 1604 aaPredicted RBP25.24■■□□□ 1.63
RPL23A-208ENST00000580755 FGD6Q6ZV73 1430 aa25.24■■□□□ 1.63
RPL23A-208ENST00000580755 LOC105371045A0A1W2PR82 267 aa25.24■■□□□ 1.63
RPL23A-208ENST00000580755 LTKP29376 864 aa25.24■■□□□ 1.63
RPL23A-208ENST00000580755 KANK4Q5T7N3 995 aaPredicted RBP25.24■■□□□ 1.63
RPL23A-208ENST00000580755 TXNDC2Q86VQ3 553 aa25.24■■□□□ 1.63
RPL23A-208ENST00000580755 ABCC3O15438 1527 aa25.23■■□□□ 1.63
RPL23A-208ENST00000580755 MYOM3Q5VTT5 1437 aa25.23■■□□□ 1.63
RPL23A-208ENST00000580755 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
RPL23A-208ENST00000580755 EID1Q9Y6B2 187 aa25.2■■□□□ 1.62
RPL23A-208ENST00000580755 PRDM15P57071 1507 aaPredicted RBP25.2■■□□□ 1.62
RPL23A-208ENST00000580755 NKTRP30414 1462 aaKnown RBP25.19■■□□□ 1.62
RPL23A-208ENST00000580755 KCNA6P17658 529 aa25.18■■□□□ 1.62
RPL23A-208ENST00000580755 MSH6P52701 1360 aa25.18■■□□□ 1.62
RPL23A-208ENST00000580755 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
RPL23A-208ENST00000580755 PROSER2Q86WR7 435 aaPredicted RBP25.16■■□□□ 1.62
RPL23A-208ENST00000580755 SLAIN2Q9P270 581 aa25.16■■□□□ 1.62
RPL23A-208ENST00000580755 MROH1Q8NDA8 1641 aa25.15■■□□□ 1.62
RPL23A-208ENST00000580755 SHPRHQ149N8 1683 aa25.14■■□□□ 1.62
RPL23A-208ENST00000580755 NWD1Q149M9 1564 aa25.14■■□□□ 1.61
RPL23A-208ENST00000580755 FOXD1Q16676 465 aa25.13■■□□□ 1.61
RPL23A-208ENST00000580755 ARHGAP31Q2M1Z3 1444 aa25.1■■□□□ 1.61
RPL23A-208ENST00000580755 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
RPL23A-208ENST00000580755 TMEM2Q9UHN6 1383 aa25.09■■□□□ 1.61
RPL23A-208ENST00000580755 ERBINQ96RT1 1412 aa25.09■■□□□ 1.61
RPL23A-208ENST00000580755 RBM33Q96EV2 1170 aaKnown RBP25.08■■□□□ 1.61
RPL23A-208ENST00000580755 RGS12O14924 1447 aa25.08■■□□□ 1.61
RPL23A-208ENST00000580755 ABCC5O15440 1437 aa25.08■■□□□ 1.61
RPL23A-208ENST00000580755 APLP2Q06481 763 aa25.07■■□□□ 1.6
RPL23A-208ENST00000580755 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
RPL23A-208ENST00000580755 ZRANB1Q9UGI0 708 aa25.06■■□□□ 1.6
RPL23A-208ENST00000580755 CEP152O94986 1710 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms