RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 PKNOX2Q96KN3 472 aa20.78■□□□□ 0.92
CCR7-203ENST00000579344 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
CCR7-203ENST00000579344 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.92
CCR7-203ENST00000579344 EIF3AQ14152 1382 aaKnown RBP20.76■□□□□ 0.91
CCR7-203ENST00000579344 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
CCR7-203ENST00000579344 CROCC2H7BZ55 1655 aa20.75■□□□□ 0.91
CCR7-203ENST00000579344 LAMC1P11047 1609 aa20.75■□□□□ 0.91
CCR7-203ENST00000579344 IQGAP2Q13576 1575 aa20.75■□□□□ 0.91
CCR7-203ENST00000579344 CARD11Q9BXL7 1154 aa20.75■□□□□ 0.91
CCR7-203ENST00000579344 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
CCR7-203ENST00000579344 CDCA7LQ96GN5 454 aa20.73■□□□□ 0.91
CCR7-203ENST00000579344 PER1O15534 1290 aaPredicted RBP20.73■□□□□ 0.91
CCR7-203ENST00000579344 SLC4A3P48751 1232 aa20.73■□□□□ 0.91
CCR7-203ENST00000579344 ZMYM3Q14202 1370 aa20.73■□□□□ 0.91
CCR7-203ENST00000579344 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
CCR7-203ENST00000579344 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.71■□□□□ 0.91
CCR7-203ENST00000579344 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
CCR7-203ENST00000579344 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
CCR7-203ENST00000579344 RRP9O43818 475 aaKnown RBP20.7■□□□□ 0.9
CCR7-203ENST00000579344 PLIN1O60240 522 aa20.69■□□□□ 0.9
CCR7-203ENST00000579344 KIAA0586Q9BVV6 1533 aa20.69■□□□□ 0.9
CCR7-203ENST00000579344 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
CCR7-203ENST00000579344 RRAGDQ9NQL2 400 aaPredicted RBP20.69■□□□□ 0.9
CCR7-203ENST00000579344 GPRASP1Q5JY77 1395 aa20.68■□□□□ 0.9
CCR7-203ENST00000579344 CLCN1P35523 988 aa20.68■□□□□ 0.9
CCR7-203ENST00000579344 BECN1Q14457 450 aa20.68■□□□□ 0.9
CCR7-203ENST00000579344 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
CCR7-203ENST00000579344 COL17A1Q9UMD9 1497 aaPredicted RBP20.67■□□□□ 0.9
CCR7-203ENST00000579344 SHANK2Q9UPX8 1470 aa20.67■□□□□ 0.9
CCR7-203ENST00000579344 PKD2Q13563 968 aa20.67■□□□□ 0.9
CCR7-203ENST00000579344 ANKRD30AQ9BXX3 1397 aa20.66■□□□□ 0.9
CCR7-203ENST00000579344 PTPRGP23470 1445 aa20.66■□□□□ 0.9
CCR7-203ENST00000579344 ZNF521Q96K83 1311 aa20.65■□□□□ 0.9
CCR7-203ENST00000579344 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
CCR7-203ENST00000579344 USP19O94966 1318 aa20.64■□□□□ 0.9
CCR7-203ENST00000579344 TRPM1Q7Z4N2 1603 aa20.64■□□□□ 0.9
CCR7-203ENST00000579344 FSD2A1L4K1 749 aa20.64■□□□□ 0.89
CCR7-203ENST00000579344 ADCY10Q96PN6 1610 aa20.63■□□□□ 0.89
CCR7-203ENST00000579344 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
CCR7-203ENST00000579344 C20orf194Q5TEA3 1177 aa20.62■□□□□ 0.89
CCR7-203ENST00000579344 SKAP1Q86WV1 359 aa20.62■□□□□ 0.89
CCR7-203ENST00000579344 MAPK8IP3Q9UPT6 1336 aa20.62■□□□□ 0.89
CCR7-203ENST00000579344 DUSP27Q5VZP5 1158 aa20.62■□□□□ 0.89
CCR7-203ENST00000579344 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
CCR7-203ENST00000579344 CNGB1Q14028 1251 aaPredicted RBP20.61■□□□□ 0.89
CCR7-203ENST00000579344 ANTXR1Q9H6X2 564 aa20.61■□□□□ 0.89
CCR7-203ENST00000579344 POGKQ9P215 609 aa20.61■□□□□ 0.89
CCR7-203ENST00000579344 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
CCR7-203ENST00000579344 NINLQ9Y2I6 1382 aa20.61■□□□□ 0.89
CCR7-203ENST00000579344 SENP3-EIF4A1A0A087X0R7 540 aa20.6■□□□□ 0.89
CCR7-203ENST00000579344 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
CCR7-203ENST00000579344 ISY1Q9ULR0 285 aaKnown RBP20.6■□□□□ 0.89
CCR7-203ENST00000579344 NLRP1Q9C000 1473 aa20.59■□□□□ 0.89
CCR7-203ENST00000579344 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
CCR7-203ENST00000579344 NUP153P49790 1475 aaKnown RBP20.58■□□□□ 0.89
CCR7-203ENST00000579344 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.89
CCR7-203ENST00000579344 PRAG1Q86YV5 1406 aa20.58■□□□□ 0.89
CCR7-203ENST00000579344 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.89
CCR7-203ENST00000579344 TRMT2AQ8IZ69 625 aaKnown RBP20.58■□□□□ 0.88
CCR7-203ENST00000579344 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.88
CCR7-203ENST00000579344 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
CCR7-203ENST00000579344 GPATCH8Q9UKJ3 1502 aaKnown RBP20.55■□□□□ 0.88
CCR7-203ENST00000579344 RAPGEF6Q8TEU7 1601 aa20.55■□□□□ 0.88
CCR7-203ENST00000579344 AAMPQ13685 434 aa20.55■□□□□ 0.88
CCR7-203ENST00000579344 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
CCR7-203ENST00000579344 ABCC10Q5T3U5 1492 aa20.54■□□□□ 0.88
CCR7-203ENST00000579344 TARBP1Q13395 1621 aaKnown RBP20.54■□□□□ 0.88
CCR7-203ENST00000579344 HSP90AA1P07900 732 aaKnown RBP20.54■□□□□ 0.88
CCR7-203ENST00000579344 HSP90AA2PQ14568 343 aaPredicted RBP20.54■□□□□ 0.88
CCR7-203ENST00000579344 NGEFQ8N5V2 710 aa20.54■□□□□ 0.88
CCR7-203ENST00000579344 GOLGA6L3A6NEY3 463 aa20.53■□□□□ 0.88
CCR7-203ENST00000579344 GOLGA2Q08379 1002 aa20.53■□□□□ 0.88
CCR7-203ENST00000579344 EIF2AK4Q9P2K8 1649 aaKnown RBP20.53■□□□□ 0.88
CCR7-203ENST00000579344 PLEKHH1Q9ULM0 1364 aa20.52■□□□□ 0.88
CCR7-203ENST00000579344 KIAA0556O60303 1618 aa20.52■□□□□ 0.88
CCR7-203ENST00000579344 NUP160Q12769 1436 aa20.52■□□□□ 0.87
CCR7-203ENST00000579344 XRCC6P12956 609 aaKnown RBP eCLIP20.52■□□□□ 0.87
CCR7-203ENST00000579344 ZMYND15Q9H091 742 aa20.52■□□□□ 0.87
CCR7-203ENST00000579344 PLXNC1O60486 1568 aa20.51■□□□□ 0.87
CCR7-203ENST00000579344 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
CCR7-203ENST00000579344 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
CCR7-203ENST00000579344 SLFN5Q08AF3 891 aa20.5■□□□□ 0.87
CCR7-203ENST00000579344 CGNL1Q0VF96 1302 aa20.5■□□□□ 0.87
CCR7-203ENST00000579344 CENPJQ9HC77 1338 aaPredicted RBP20.5■□□□□ 0.87
CCR7-203ENST00000579344 NUP155O75694 1391 aa20.49■□□□□ 0.87
CCR7-203ENST00000579344 NKTRP30414 1462 aaKnown RBP20.49■□□□□ 0.87
CCR7-203ENST00000579344 PDE3AQ14432 1141 aa20.49■□□□□ 0.87
CCR7-203ENST00000579344 PIK3C2GO75747 1445 aa20.49■□□□□ 0.87
CCR7-203ENST00000579344 MRE11P49959 708 aa20.48■□□□□ 0.87
CCR7-203ENST00000579344 TESK2Q96S53 571 aa20.47■□□□□ 0.87
CCR7-203ENST00000579344 ERBINQ96RT1 1412 aa20.47■□□□□ 0.87
CCR7-203ENST00000579344 RGS3P49796 1198 aa20.47■□□□□ 0.87
CCR7-203ENST00000579344 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
CCR7-203ENST00000579344 NAP1L5Q96NT1 182 aaPredicted RBP20.46■□□□□ 0.87
CCR7-203ENST00000579344 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
CCR7-203ENST00000579344 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
CCR7-203ENST00000579344 DISP1Q96F81 1524 aa20.46■□□□□ 0.87
CCR7-203ENST00000579344 TBC1D32Q96NH3 1257 aa20.45■□□□□ 0.86
CCR7-203ENST00000579344 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
CCR7-203ENST00000579344 SCAPERQ9BY12 1400 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms