RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 KIF3BO15066 747 aa20.7■□□□□ 0.9
CSNK1D-209ENST00000578904 MLECQ14165 292 aa20.69■□□□□ 0.9
CSNK1D-209ENST00000578904 RNF17Q9BXT8 1623 aaKnown RBP20.68■□□□□ 0.9
CSNK1D-209ENST00000578904 HRCP23327 699 aa20.68■□□□□ 0.9
CSNK1D-209ENST00000578904 GGT6Q6P531 493 aa20.65■□□□□ 0.9
CSNK1D-209ENST00000578904 DEPDC5O75140 1603 aa20.64■□□□□ 0.89
CSNK1D-209ENST00000578904 MROH1Q8NDA8 1641 aa20.63■□□□□ 0.89
CSNK1D-209ENST00000578904 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
CSNK1D-209ENST00000578904 FER1L4A9Z1Z3 1794 aa20.62■□□□□ 0.89
CSNK1D-209ENST00000578904 ADAMTSL3P82987 1691 aa20.61■□□□□ 0.89
CSNK1D-209ENST00000578904 MADDQ8WXG6 1647 aa20.61■□□□□ 0.89
CSNK1D-209ENST00000578904 UNC13BO14795 1591 aa20.61■□□□□ 0.89
CSNK1D-209ENST00000578904 RAB3GAP2Q9H2M9 1393 aa20.6■□□□□ 0.89
CSNK1D-209ENST00000578904 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
CSNK1D-209ENST00000578904 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
CSNK1D-209ENST00000578904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.896e-7■□□□□ 9.8
CSNK1D-209ENST00000578904 KANK1Q14678 1352 aa20.59■□□□□ 0.89
CSNK1D-209ENST00000578904 ESF1Q9H501 851 aaKnown RBP20.58■□□□□ 0.89
CSNK1D-209ENST00000578904 ZC3H13Q5T200 1668 aaKnown RBP20.57■□□□□ 0.88
CSNK1D-209ENST00000578904 RIMS1Q86UR5 1692 aaKnown RBP20.57■□□□□ 0.88
CSNK1D-209ENST00000578904 CNTLNQ9NXG0 1405 aa20.56■□□□□ 0.88
CSNK1D-209ENST00000578904 FBXO41Q8TF61 875 aa20.56■□□□□ 0.88
CSNK1D-209ENST00000578904 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
CSNK1D-209ENST00000578904 CLTCQ00610 1675 aaKnown RBP20.56■□□□□ 0.88
CSNK1D-209ENST00000578904 ABCC3O15438 1527 aa20.55■□□□□ 0.88
CSNK1D-209ENST00000578904 CCER1Q8TC90 406 aaPredicted RBP20.55■□□□□ 0.88
CSNK1D-209ENST00000578904 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
CSNK1D-209ENST00000578904 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
CSNK1D-209ENST00000578904 CEP152O94986 1710 aa20.54■□□□□ 0.88
CSNK1D-209ENST00000578904 NUP155O75694 1391 aa20.53■□□□□ 0.88
CSNK1D-209ENST00000578904 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
CSNK1D-209ENST00000578904 TRIM52Q96A61 297 aa20.52■□□□□ 0.88
CSNK1D-209ENST00000578904 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
CSNK1D-209ENST00000578904 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
CSNK1D-209ENST00000578904 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
CSNK1D-209ENST00000578904 PTPRMP28827 1452 aa20.47■□□□□ 0.87
CSNK1D-209ENST00000578904 TET3O43151 1660 aa20.47■□□□□ 0.87
CSNK1D-209ENST00000578904 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-209ENST00000578904 EFCAB6Q5THR3 1501 aa20.46■□□□□ 0.87
CSNK1D-209ENST00000578904 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
CSNK1D-209ENST00000578904 ZMYM3Q14202 1370 aa20.46■□□□□ 0.87
CSNK1D-209ENST00000578904 C3P01024 1663 aa20.45■□□□□ 0.86
CSNK1D-209ENST00000578904 PZPP20742 1482 aa20.44■□□□□ 0.86
CSNK1D-209ENST00000578904 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
CSNK1D-209ENST00000578904 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-209ENST00000578904 NPATQ14207 1427 aa20.41■□□□□ 0.86
CSNK1D-209ENST00000578904 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
CSNK1D-209ENST00000578904 CEBPAP49715 358 aaPredicted RBP20.4■□□□□ 0.86
CSNK1D-209ENST00000578904 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
CSNK1D-209ENST00000578904 E9PCH4 1651 aa20.39■□□□□ 0.86
CSNK1D-209ENST00000578904 RPRD2Q5VT52 1461 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-209ENST00000578904 ERVK-7P63135 1459 aa20.37■□□□□ 0.85
CSNK1D-209ENST00000578904 MPHOSPH9Q99550 1183 aa20.36■□□□□ 0.85
CSNK1D-209ENST00000578904 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
CSNK1D-209ENST00000578904 PKD2Q13563 968 aa20.35■□□□□ 0.85
CSNK1D-209ENST00000578904 SPATA31D1Q6ZQQ2 1576 aa20.34■□□□□ 0.85
CSNK1D-209ENST00000578904 FBXO31Q5XUX0 539 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-209ENST00000578904 TNRQ92752 1358 aa20.32■□□□□ 0.84
CSNK1D-209ENST00000578904 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
CSNK1D-209ENST00000578904 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
CSNK1D-209ENST00000578904 NOS1P29475 1434 aa20.3■□□□□ 0.84
CSNK1D-209ENST00000578904 SYNMO15061 1565 aa20.29■□□□□ 0.84
CSNK1D-209ENST00000578904 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
CSNK1D-209ENST00000578904 FOXD1Q16676 465 aa20.28■□□□□ 0.84
CSNK1D-209ENST00000578904 TRPM2O94759 1503 aa20.26■□□□□ 0.83
CSNK1D-209ENST00000578904 PTPRTO14522 1441 aa20.26■□□□□ 0.83
CSNK1D-209ENST00000578904 UHRF1BP1Q6BDS2 1440 aa20.25■□□□□ 0.83
CSNK1D-209ENST00000578904 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
CSNK1D-209ENST00000578904 UGGT1Q9NYU2 1555 aa20.23■□□□□ 0.83
CSNK1D-209ENST00000578904 SETD1BQ9UPS6 1966 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-209ENST00000578904 PLA2R1Q13018 1463 aa20.22■□□□□ 0.83
CSNK1D-209ENST00000578904 ZNF142P52746 1687 aaPredicted RBP20.22■□□□□ 0.83
CSNK1D-209ENST00000578904 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-209ENST00000578904 PIK3C2BO00750 1634 aa20.21■□□□□ 0.83
CSNK1D-209ENST00000578904 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
CSNK1D-209ENST00000578904 CLTCL1P53675 1640 aa20.2■□□□□ 0.82
CSNK1D-209ENST00000578904 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
CSNK1D-209ENST00000578904 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
CSNK1D-209ENST00000578904 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
CSNK1D-209ENST00000578904 ANKRD30BQ9BXX2 1392 aa20.17■□□□□ 0.82
CSNK1D-209ENST00000578904 LMTK3Q96Q04 1460 aa20.17■□□□□ 0.82
CSNK1D-209ENST00000578904 ADGRB3O60242 1522 aa20.17■□□□□ 0.82
CSNK1D-209ENST00000578904 IDI1Q13907 227 aa20.16■□□□□ 0.82
CSNK1D-209ENST00000578904 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
CSNK1D-209ENST00000578904 UBR1Q8IWV7 1749 aa20.13■□□□□ 0.81
CSNK1D-209ENST00000578904 CHGAP10645 457 aaKnown RBP20.13■□□□□ 0.81
CSNK1D-209ENST00000578904 KDM5AP29375 1690 aaKnown RBP20.13■□□□□ 0.81
CSNK1D-209ENST00000578904 KIF1BO60333 1816 aa20.11■□□□□ 0.81
CSNK1D-209ENST00000578904 NEUROD1Q13562 356 aa20.11■□□□□ 0.81
CSNK1D-209ENST00000578904 TMEM131LA2VDJ0 1609 aa20.11■□□□□ 0.81
CSNK1D-209ENST00000578904 MYO5BQ9ULV0 1848 aa20.08■□□□□ 0.8
CSNK1D-209ENST00000578904 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
CSNK1D-209ENST00000578904 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
CSNK1D-209ENST00000578904 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
CSNK1D-209ENST00000578904 HSPA2P54652 639 aa20.06■□□□□ 0.8
CSNK1D-209ENST00000578904 ZNF326Q5BKZ1 582 aaKnown RBP20.04■□□□□ 0.8
CSNK1D-209ENST00000578904 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
CSNK1D-209ENST00000578904 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
CSNK1D-209ENST00000578904 SPATA31E1Q6ZUB1 1445 aa20.03■□□□□ 0.8
CSNK1D-209ENST00000578904 SLIT1O75093 1534 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms