RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-208ENST00000578830 MYO3AQ8NEV4 1616 aa14.33□□□□□ -0.11
NUP85-208ENST00000578830 ATP7AQ04656 1500 aa14.33□□□□□ -0.12
NUP85-208ENST00000578830 SOCS7O14512 581 aa14.33□□□□□ -0.12
NUP85-208ENST00000578830 PLXNC1O60486 1568 aa14.33□□□□□ -0.12
NUP85-208ENST00000578830 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.12
NUP85-208ENST00000578830 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
NUP85-208ENST00000578830 ZMYM3Q14202 1370 aa14.31□□□□□ -0.12
NUP85-208ENST00000578830 SPAG9O60271 1321 aaKnown RBP14.3□□□□□ -0.12
NUP85-208ENST00000578830 PLEKHH2Q8IVE3 1493 aa14.3□□□□□ -0.12
NUP85-208ENST00000578830 ZNF777Q9ULD5 760 aaPredicted RBP14.29□□□□□ -0.12
NUP85-208ENST00000578830 KIAA1107Q9UPP5 1409 aa14.29□□□□□ -0.12
NUP85-208ENST00000578830 CEP170BQ9Y4F5 1589 aaPredicted RBP14.29□□□□□ -0.12
NUP85-208ENST00000578830 A2MP01023 1474 aa14.28□□□□□ -0.12
NUP85-208ENST00000578830 PLA2R1Q13018 1463 aa14.28□□□□□ -0.12
NUP85-208ENST00000578830 POLR1AO95602 1720 aaPredicted RBP14.27□□□□□ -0.12
NUP85-208ENST00000578830 HNRNPMP52272 730 aaKnown RBP eCLIP14.27□□□□□ -0.138e-10■■■■■ 34.4
NUP85-208ENST00000578830 POLA2Q14181 598 aa14.26□□□□□ -0.13
NUP85-208ENST00000578830 PTPRKQ15262 1439 aa14.25□□□□□ -0.13
NUP85-208ENST00000578830 NCKAP5LQ9HCH0 1330 aa14.25□□□□□ -0.13
NUP85-208ENST00000578830 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
NUP85-208ENST00000578830 PKD2Q13563 968 aa14.24□□□□□ -0.13
NUP85-208ENST00000578830 CFDP1Q9UEE9 299 aaPredicted RBP14.23□□□□□ -0.13
NUP85-208ENST00000578830 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
NUP85-208ENST00000578830 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
NUP85-208ENST00000578830 ZNF335Q9H4Z2 1342 aaPredicted RBP14.22□□□□□ -0.13
NUP85-208ENST00000578830 TIAM1Q13009 1591 aa14.22□□□□□ -0.13
NUP85-208ENST00000578830 GGT6Q6P531 493 aa14.2□□□□□ -0.14
NUP85-208ENST00000578830 A2ML1A8K2U0 1454 aa14.19□□□□□ -0.14
NUP85-208ENST00000578830 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
NUP85-208ENST00000578830 MTUS2Q5JR59 1369 aa14.19□□□□□ -0.14
NUP85-208ENST00000578830 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
NUP85-208ENST00000578830 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
NUP85-208ENST00000578830 RTEL1-TNFRSF6BF6WH68 1400 aa14.17□□□□□ -0.14
NUP85-208ENST00000578830 FAM135AQ9P2D6 1515 aa14.16□□□□□ -0.14
NUP85-208ENST00000578830 NEURL4Q96JN8 1562 aa14.16□□□□□ -0.14
NUP85-208ENST00000578830 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
NUP85-208ENST00000578830 CPS1P31327 1500 aa14.14□□□□□ -0.15
NUP85-208ENST00000578830 KDM5DQ9BY66 1539 aa14.14□□□□□ -0.15
NUP85-208ENST00000578830 ZNF644Q9H582 1327 aaPredicted RBP14.14□□□□□ -0.15
NUP85-208ENST00000578830 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
NUP85-208ENST00000578830 CFAP65Q6ZU64 1925 aaKnown RBP14.13□□□□□ -0.15
NUP85-208ENST00000578830 PZPP20742 1482 aa14.12□□□□□ -0.15
NUP85-208ENST00000578830 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
NUP85-208ENST00000578830 DEPDC5O75140 1603 aa14.12□□□□□ -0.15
NUP85-208ENST00000578830 TNRQ92752 1358 aa14.11□□□□□ -0.15
NUP85-208ENST00000578830 CCDC141Q6ZP82 1450 aa14.11□□□□□ -0.15
NUP85-208ENST00000578830 SHANK2Q9UPX8 1470 aa14.11□□□□□ -0.15
NUP85-208ENST00000578830 MED1Q15648 1581 aaPredicted RBP14.1□□□□□ -0.15
NUP85-208ENST00000578830 CAMSAP2Q08AD1 1489 aa14.09□□□□□ -0.15
NUP85-208ENST00000578830 IQGAP1P46940 1657 aa14.09□□□□□ -0.15
NUP85-208ENST00000578830 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
NUP85-208ENST00000578830 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
NUP85-208ENST00000578830 VWDEQ8N2E2 1590 aa14.09□□□□□ -0.15
NUP85-208ENST00000578830 NLRP1Q9C000 1473 aa14.08□□□□□ -0.16
NUP85-208ENST00000578830 KIF3BO15066 747 aa14.08□□□□□ -0.16
NUP85-208ENST00000578830 TOM1O60784 492 aa14.08□□□□□ -0.16
NUP85-208ENST00000578830 FBXO31Q5XUX0 539 aaPredicted RBP14.08□□□□□ -0.16
NUP85-208ENST00000578830 UGGT1Q9NYU2 1555 aa14.08□□□□□ -0.16
NUP85-208ENST00000578830 STRCP1A6NGW2 1772 aa14.07□□□□□ -0.16
NUP85-208ENST00000578830 RSPH4AQ5TD94 716 aa14.07□□□□□ -0.16
NUP85-208ENST00000578830 RNF17Q9BXT8 1623 aaKnown RBP14.07□□□□□ -0.16
NUP85-208ENST00000578830 MED14O60244 1454 aa14.06□□□□□ -0.16
NUP85-208ENST00000578830 HSPA1LP34931 641 aa14.06□□□□□ -0.16
NUP85-208ENST00000578830 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
NUP85-208ENST00000578830 WASHC2CQ9Y4E1 1318 aa14.06□□□□□ -0.16
NUP85-208ENST00000578830 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
NUP85-208ENST00000578830 THEMISQ8N1K5 641 aaPredicted RBP14.05□□□□□ -0.16
NUP85-208ENST00000578830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP85-208ENST00000578830 MIA2Q96PC5 1412 aa14.05□□□□□ -0.16
NUP85-208ENST00000578830 ALKQ9UM73 1620 aa14.04□□□□□ -0.16
NUP85-208ENST00000578830 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
NUP85-208ENST00000578830 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
NUP85-208ENST00000578830 CEP152O94986 1710 aa14.04□□□□□ -0.16
NUP85-208ENST00000578830 NPHP4O75161 1426 aaPredicted RBP14.03□□□□□ -0.16
NUP85-208ENST00000578830 SYNMO15061 1565 aa14.03□□□□□ -0.16
NUP85-208ENST00000578830 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
NUP85-208ENST00000578830 UBR1Q8IWV7 1749 aa14.02□□□□□ -0.16
NUP85-208ENST00000578830 ABCC3O15438 1527 aa14□□□□□ -0.17
NUP85-208ENST00000578830 XIRP1Q702N8 1843 aaKnown RBP14□□□□□ -0.17
NUP85-208ENST00000578830 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
NUP85-208ENST00000578830 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
NUP85-208ENST00000578830 MROH1Q8NDA8 1641 aa13.99□□□□□ -0.17
NUP85-208ENST00000578830 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
NUP85-208ENST00000578830 ERVK-7P63135 1459 aa13.97□□□□□ -0.17
NUP85-208ENST00000578830 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
NUP85-208ENST00000578830 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
NUP85-208ENST00000578830 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
NUP85-208ENST00000578830 SCAF11Q99590 1463 aaKnown RBP13.92□□□□□ -0.18
NUP85-208ENST00000578830 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
NUP85-208ENST00000578830 SLIT1O75093 1534 aa13.91□□□□□ -0.18
NUP85-208ENST00000578830 ARHGAP23Q9P227 1491 aa13.91□□□□□ -0.18
NUP85-208ENST00000578830 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.18
NUP85-208ENST00000578830 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
NUP85-208ENST00000578830 PIK3C2BO00750 1634 aa13.9□□□□□ -0.19
NUP85-208ENST00000578830 MAP3K1Q13233 1512 aa13.9□□□□□ -0.19
NUP85-208ENST00000578830 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
NUP85-208ENST00000578830 ARHGAP31Q2M1Z3 1444 aa13.89□□□□□ -0.19
NUP85-208ENST00000578830 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
NUP85-208ENST00000578830 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
NUP85-208ENST00000578830 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms