RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 RNF17Q9BXT8 1623 aaKnown RBP15.88■□□□□ 0.13
USP22-208ENST00000578446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.132e-9■□□□□ 10.4
USP22-208ENST00000578446 PRDM15P57071 1507 aaPredicted RBP15.87■□□□□ 0.13
USP22-208ENST00000578446 KANK1Q14678 1352 aa15.87■□□□□ 0.13
USP22-208ENST00000578446 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
USP22-208ENST00000578446 UNC13BO14795 1591 aa15.86■□□□□ 0.13
USP22-208ENST00000578446 DEPDC5O75140 1603 aa15.86■□□□□ 0.13
USP22-208ENST00000578446 MROH1Q8NDA8 1641 aa15.85■□□□□ 0.13
USP22-208ENST00000578446 ACIN1Q9UKV3 1341 aaKnown RBP15.85■□□□□ 0.13
USP22-208ENST00000578446 NUP155O75694 1391 aa15.85■□□□□ 0.13
USP22-208ENST00000578446 HRCP23327 699 aa15.83■□□□□ 0.12
USP22-208ENST00000578446 ESF1Q9H501 851 aaKnown RBP15.83■□□□□ 0.12
USP22-208ENST00000578446 KDM5DQ9BY66 1539 aa15.83■□□□□ 0.12
USP22-208ENST00000578446 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
USP22-208ENST00000578446 WASHC2CQ9Y4E1 1318 aa15.82■□□□□ 0.12
USP22-208ENST00000578446 FAM135AQ9P2D6 1515 aa15.82■□□□□ 0.12
USP22-208ENST00000578446 ABCC3O15438 1527 aa15.8■□□□□ 0.12
USP22-208ENST00000578446 VWDEQ8N2E2 1590 aa15.79■□□□□ 0.12
USP22-208ENST00000578446 CNTLNQ9NXG0 1405 aa15.79■□□□□ 0.12
USP22-208ENST00000578446 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
USP22-208ENST00000578446 ZC3H13Q5T200 1668 aaKnown RBP15.78■□□□□ 0.12
USP22-208ENST00000578446 PZPP20742 1482 aa15.78■□□□□ 0.12
USP22-208ENST00000578446 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
USP22-208ENST00000578446 LMTK2Q8IWU2 1503 aa15.77■□□□□ 0.11
USP22-208ENST00000578446 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
USP22-208ENST00000578446 FER1L4A9Z1Z3 1794 aa15.75■□□□□ 0.11
USP22-208ENST00000578446 ADAMTSL3P82987 1691 aa15.75■□□□□ 0.11
USP22-208ENST00000578446 CEP152O94986 1710 aa15.74■□□□□ 0.11
USP22-208ENST00000578446 EFCAB6Q5THR3 1501 aa15.74■□□□□ 0.11
USP22-208ENST00000578446 CLTCQ00610 1675 aaKnown RBP15.74■□□□□ 0.11
USP22-208ENST00000578446 MPHOSPH9Q99550 1183 aa15.74■□□□□ 0.11
USP22-208ENST00000578446 TET3O43151 1660 aa15.73■□□□□ 0.11
USP22-208ENST00000578446 CAMSAP1Q5T5Y3 1602 aa15.73■□□□□ 0.11
USP22-208ENST00000578446 NPATQ14207 1427 aa15.71■□□□□ 0.11
USP22-208ENST00000578446 RIMS1Q86UR5 1692 aaKnown RBP15.71■□□□□ 0.11
USP22-208ENST00000578446 PKD2Q13563 968 aa15.71■□□□□ 0.11
USP22-208ENST00000578446 ZMYM3Q14202 1370 aa15.71■□□□□ 0.11
USP22-208ENST00000578446 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
USP22-208ENST00000578446 ARHGAP31Q2M1Z3 1444 aa15.7■□□□□ 0.1
USP22-208ENST00000578446 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
USP22-208ENST00000578446 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
USP22-208ENST00000578446 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
USP22-208ENST00000578446 KDM4FA0A1W2PPD8 638 aa15.68■□□□□ 0.1
USP22-208ENST00000578446 PTPRMP28827 1452 aa15.67■□□□□ 0.1
USP22-208ENST00000578446 FOXD1Q16676 465 aa15.67■□□□□ 0.1
USP22-208ENST00000578446 E9PCH4 1651 aa15.67■□□□□ 0.1
USP22-208ENST00000578446 CEBPAP49715 358 aaPredicted RBP15.66■□□□□ 0.1
USP22-208ENST00000578446 ERVK-7P63135 1459 aa15.65■□□□□ 0.1
USP22-208ENST00000578446 C3P01024 1663 aa15.64■□□□□ 0.09
USP22-208ENST00000578446 FBXO31Q5XUX0 539 aaPredicted RBP15.64■□□□□ 0.09
USP22-208ENST00000578446 TNRQ92752 1358 aa15.62■□□□□ 0.09
USP22-208ENST00000578446 NOS1P29475 1434 aa15.62■□□□□ 0.09
USP22-208ENST00000578446 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
USP22-208ENST00000578446 SPATA31D1Q6ZQQ2 1576 aa15.62■□□□□ 0.09
USP22-208ENST00000578446 PTPRTO14522 1441 aa15.61■□□□□ 0.09
USP22-208ENST00000578446 PREX1Q8TCU6 1659 aa15.61■□□□□ 0.09
USP22-208ENST00000578446 TRPM2O94759 1503 aa15.61■□□□□ 0.09
USP22-208ENST00000578446 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
USP22-208ENST00000578446 SPHKAPQ2M3C7 1700 aa15.59■□□□□ 0.09
USP22-208ENST00000578446 ANKRD30BQ9BXX2 1392 aa15.59■□□□□ 0.09
USP22-208ENST00000578446 CCDC144AA2RUR9 1427 aa15.59■□□□□ 0.09
USP22-208ENST00000578446 SYNMO15061 1565 aa15.58■□□□□ 0.09
USP22-208ENST00000578446 UGGT1Q9NYU2 1555 aa15.57■□□□□ 0.08
USP22-208ENST00000578446 NLRP1Q9C000 1473 aa15.55■□□□□ 0.08
USP22-208ENST00000578446 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
USP22-208ENST00000578446 CLTCL1P53675 1640 aa15.54■□□□□ 0.08
USP22-208ENST00000578446 MYO3AQ8NEV4 1616 aa15.54■□□□□ 0.08
USP22-208ENST00000578446 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
USP22-208ENST00000578446 CLSPNQ9HAW4 1339 aa15.53■□□□□ 0.08
USP22-208ENST00000578446 IDI1Q13907 227 aa15.52■□□□□ 0.08
USP22-208ENST00000578446 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
USP22-208ENST00000578446 PIK3C2BO00750 1634 aa15.52■□□□□ 0.08
USP22-208ENST00000578446 CFAP65Q6ZU64 1925 aaKnown RBP15.51■□□□□ 0.07
USP22-208ENST00000578446 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
USP22-208ENST00000578446 ADGRB3O60242 1522 aa15.5■□□□□ 0.07
USP22-208ENST00000578446 A2ML1A8K2U0 1454 aa15.5■□□□□ 0.07
USP22-208ENST00000578446 CEP170BQ9Y4F5 1589 aaPredicted RBP15.49■□□□□ 0.07
USP22-208ENST00000578446 NEUROD1Q13562 356 aa15.49■□□□□ 0.07
USP22-208ENST00000578446 SIN3AQ96ST3 1273 aa15.49■□□□□ 0.07
USP22-208ENST00000578446 ZNF142P52746 1687 aaPredicted RBP15.47■□□□□ 0.07
USP22-208ENST00000578446 SPATA31E1Q6ZUB1 1445 aa15.45■□□□□ 0.06
USP22-208ENST00000578446 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
USP22-208ENST00000578446 TMEM131LA2VDJ0 1609 aa15.45■□□□□ 0.06
USP22-208ENST00000578446 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
USP22-208ENST00000578446 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
USP22-208ENST00000578446 THEMISQ8N1K5 641 aaPredicted RBP15.43■□□□□ 0.06
USP22-208ENST00000578446 TONSLQ96HA7 1378 aa15.43■□□□□ 0.06
USP22-208ENST00000578446 LMTK3Q96Q04 1460 aa15.43■□□□□ 0.06
USP22-208ENST00000578446 NEURL4Q96JN8 1562 aa15.43■□□□□ 0.06
USP22-208ENST00000578446 KDM5AP29375 1690 aaKnown RBP15.43■□□□□ 0.06
USP22-208ENST00000578446 KIF1BO60333 1816 aa15.43■□□□□ 0.06
USP22-208ENST00000578446 UBR1Q8IWV7 1749 aa15.43■□□□□ 0.06
USP22-208ENST00000578446 SETD1BQ9UPS6 1966 aaKnown RBP15.42■□□□□ 0.06
USP22-208ENST00000578446 TMEM2Q9UHN6 1383 aa15.41■□□□□ 0.06
USP22-208ENST00000578446 RIMS2Q9UQ26 1411 aa15.39■□□□□ 0.05
USP22-208ENST00000578446 RPGRIP1LQ68CZ1 1315 aa15.39■□□□□ 0.05
USP22-208ENST00000578446 SLIT1O75093 1534 aa15.38■□□□□ 0.05
USP22-208ENST00000578446 PPP1R15AO75807 674 aaPredicted RBP15.38■□□□□ 0.05
USP22-208ENST00000578446 ZFYVE9O95405 1425 aa15.37■□□□□ 0.05
USP22-208ENST00000578446 HDGFP51858 240 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms