RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 GGT6Q6P531 493 aa19.35■□□□□ 0.69
CDK5RAP3-203ENST00000577442 RRP7BPQ9NSQ0 103 aa19.35■□□□□ 0.69
CDK5RAP3-203ENST00000577442 MROH2AA6NES4 1674 aa19.34■□□□□ 0.69
CDK5RAP3-203ENST00000577442 PTPRKQ15262 1439 aa19.34■□□□□ 0.69
CDK5RAP3-203ENST00000577442 CLTCQ00610 1675 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-203ENST00000577442 ITGAEP38570 1179 aa19.31■□□□□ 0.68
CDK5RAP3-203ENST00000577442 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
CDK5RAP3-203ENST00000577442 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
CDK5RAP3-203ENST00000577442 C3P01024 1663 aa19.29■□□□□ 0.68
CDK5RAP3-203ENST00000577442 ZC3H13Q5T200 1668 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-203ENST00000577442 DEPDC5O75140 1603 aa19.28■□□□□ 0.68
CDK5RAP3-203ENST00000577442 SETD1BQ9UPS6 1966 aaKnown RBP19.28■□□□□ 0.68
CDK5RAP3-203ENST00000577442 PRDM15P57071 1507 aaPredicted RBP19.27■□□□□ 0.68
CDK5RAP3-203ENST00000577442 MROH1Q8NDA8 1641 aa19.26■□□□□ 0.67
CDK5RAP3-203ENST00000577442 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
CDK5RAP3-203ENST00000577442 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
CDK5RAP3-203ENST00000577442 ZMYM3Q14202 1370 aa19.24■□□□□ 0.67
CDK5RAP3-203ENST00000577442 KANK1Q14678 1352 aa19.24■□□□□ 0.67
CDK5RAP3-203ENST00000577442 ABCC3O15438 1527 aa19.24■□□□□ 0.67
CDK5RAP3-203ENST00000577442 NPATQ14207 1427 aa19.23■□□□□ 0.67
CDK5RAP3-203ENST00000577442 CEBPAP49715 358 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP3-203ENST00000577442 CEP152O94986 1710 aa19.21■□□□□ 0.67
CDK5RAP3-203ENST00000577442 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
CDK5RAP3-203ENST00000577442 PREX1Q8TCU6 1659 aa19.2■□□□□ 0.66
CDK5RAP3-203ENST00000577442 PZPP20742 1482 aa19.2■□□□□ 0.66
CDK5RAP3-203ENST00000577442 UNC13BO14795 1591 aa19.19■□□□□ 0.66
CDK5RAP3-203ENST00000577442 CAMSAP1Q5T5Y3 1602 aa19.18■□□□□ 0.66
CDK5RAP3-203ENST00000577442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.667e-9■■□□□ 13.5
CDK5RAP3-203ENST00000577442 VWDEQ8N2E2 1590 aa19.18■□□□□ 0.66
CDK5RAP3-203ENST00000577442 HFM1A2PYH4 1435 aa19.17■□□□□ 0.66
CDK5RAP3-203ENST00000577442 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
CDK5RAP3-203ENST00000577442 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
CDK5RAP3-203ENST00000577442 NAIPQ13075 1403 aa19.16■□□□□ 0.66
CDK5RAP3-203ENST00000577442 LMTK3Q96Q04 1460 aa19.15■□□□□ 0.66
CDK5RAP3-203ENST00000577442 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.65
CDK5RAP3-203ENST00000577442 EFCAB6Q5THR3 1501 aa19.11■□□□□ 0.65
CDK5RAP3-203ENST00000577442 TNRQ92752 1358 aa19.11■□□□□ 0.65
CDK5RAP3-203ENST00000577442 TET3O43151 1660 aa19.11■□□□□ 0.65
CDK5RAP3-203ENST00000577442 IQGAP3Q86VI3 1631 aa19.11■□□□□ 0.65
CDK5RAP3-203ENST00000577442 MYO3AQ8NEV4 1616 aa19.11■□□□□ 0.65
CDK5RAP3-203ENST00000577442 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
CDK5RAP3-203ENST00000577442 ERVK-7P63135 1459 aa19.09■□□□□ 0.65
CDK5RAP3-203ENST00000577442 ZNF142P52746 1687 aaPredicted RBP19.09■□□□□ 0.65
CDK5RAP3-203ENST00000577442 CFAP65Q6ZU64 1925 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP3-203ENST00000577442 NUP155O75694 1391 aa19.07■□□□□ 0.64
CDK5RAP3-203ENST00000577442 FBXO31Q5XUX0 539 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-203ENST00000577442 RPRD2Q5VT52 1461 aaKnown RBP19.07■□□□□ 0.64
CDK5RAP3-203ENST00000577442 CEP170BQ9Y4F5 1589 aaPredicted RBP19.06■□□□□ 0.64
CDK5RAP3-203ENST00000577442 NLRP1Q9C000 1473 aa19.06■□□□□ 0.64
CDK5RAP3-203ENST00000577442 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
CDK5RAP3-203ENST00000577442 ACIN1Q9UKV3 1341 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-203ENST00000577442 HSPA2P54652 639 aa19.01■□□□□ 0.63
CDK5RAP3-203ENST00000577442 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
CDK5RAP3-203ENST00000577442 NOS1P29475 1434 aa19■□□□□ 0.63
CDK5RAP3-203ENST00000577442 E9PCH4 1651 aa18.99■□□□□ 0.63
CDK5RAP3-203ENST00000577442 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
CDK5RAP3-203ENST00000577442 UGGT1Q9NYU2 1555 aa18.97■□□□□ 0.63
CDK5RAP3-203ENST00000577442 PLA2R1Q13018 1463 aa18.97■□□□□ 0.63
CDK5RAP3-203ENST00000577442 SYNMO15061 1565 aa18.96■□□□□ 0.63
CDK5RAP3-203ENST00000577442 SLC52A1Q9NWF4 448 aa18.93■□□□□ 0.62
CDK5RAP3-203ENST00000577442 RAB3GAP2Q9H2M9 1393 aa18.93■□□□□ 0.62
CDK5RAP3-203ENST00000577442 KDM5AP29375 1690 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-203ENST00000577442 THEMISQ8N1K5 641 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-203ENST00000577442 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
CDK5RAP3-203ENST00000577442 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
CDK5RAP3-203ENST00000577442 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-203ENST00000577442 PIK3C2BO00750 1634 aa18.91■□□□□ 0.62
CDK5RAP3-203ENST00000577442 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
CDK5RAP3-203ENST00000577442 STAG3Q9UJ98 1225 aa18.89■□□□□ 0.61
CDK5RAP3-203ENST00000577442 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
CDK5RAP3-203ENST00000577442 ADGRB3O60242 1522 aa18.89■□□□□ 0.61
CDK5RAP3-203ENST00000577442 PKD2Q13563 968 aa18.88■□□□□ 0.61
CDK5RAP3-203ENST00000577442 PTPRTO14522 1441 aa18.88■□□□□ 0.61
CDK5RAP3-203ENST00000577442 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-203ENST00000577442 HRCP23327 699 aa18.87■□□□□ 0.61
CDK5RAP3-203ENST00000577442 IDI1Q13907 227 aa18.87■□□□□ 0.61
CDK5RAP3-203ENST00000577442 TRPM2O94759 1503 aa18.86■□□□□ 0.61
CDK5RAP3-203ENST00000577442 ANKLE2Q86XL3 938 aa18.84■□□□□ 0.61
CDK5RAP3-203ENST00000577442 SLIT1O75093 1534 aa18.84■□□□□ 0.61
CDK5RAP3-203ENST00000577442 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.6
CDK5RAP3-203ENST00000577442 ARHGAP23Q9P227 1491 aa18.83■□□□□ 0.6
CDK5RAP3-203ENST00000577442 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-203ENST00000577442 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
CDK5RAP3-203ENST00000577442 TMEM131LA2VDJ0 1609 aa18.81■□□□□ 0.6
CDK5RAP3-203ENST00000577442 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
CDK5RAP3-203ENST00000577442 SCAF11Q99590 1463 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-203ENST00000577442 MYO5BQ9ULV0 1848 aa18.8■□□□□ 0.6
CDK5RAP3-203ENST00000577442 NEURL4Q96JN8 1562 aa18.8■□□□□ 0.6
CDK5RAP3-203ENST00000577442 CLTCL1P53675 1640 aa18.79■□□□□ 0.6
CDK5RAP3-203ENST00000577442 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
CDK5RAP3-203ENST00000577442 MED14O60244 1454 aa18.78■□□□□ 0.6
CDK5RAP3-203ENST00000577442 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-203ENST00000577442 KIF1BO60333 1816 aa18.78■□□□□ 0.6
CDK5RAP3-203ENST00000577442 NPHP4O75161 1426 aaPredicted RBP18.77■□□□□ 0.6
CDK5RAP3-203ENST00000577442 IQGAP1P46940 1657 aa18.76■□□□□ 0.59
CDK5RAP3-203ENST00000577442 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP3-203ENST00000577442 TXNDC2Q86VQ3 553 aa18.75■□□□□ 0.59
CDK5RAP3-203ENST00000577442 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
CDK5RAP3-203ENST00000577442 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
CDK5RAP3-203ENST00000577442 FOXD1Q16676 465 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms