RNA–Protein interactions for RNA: ENST00000577427.1

SCO1-203, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3 BASIC

Gene SCO1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-203ENST00000577427 KDM5CP41229 1560 aa27.46■■□□□ 1.99
SCO1-203ENST00000577427 CCER2I3L3R5 266 aa27.46■■□□□ 1.99
SCO1-203ENST00000577427 WASHC2AQ641Q2 1341 aa27.46■■□□□ 1.99
SCO1-203ENST00000577427 SCAPERQ9BY12 1400 aa27.44■■□□□ 1.98
SCO1-203ENST00000577427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.983e-7■□□□□ 9.7
SCO1-203ENST00000577427 CCDC7Q96M83 1385 aa27.42■■□□□ 1.98
SCO1-203ENST00000577427 CNTLNQ9NXG0 1405 aa27.42■■□□□ 1.98
SCO1-203ENST00000577427 TET3O43151 1660 aa27.41■■□□□ 1.98
SCO1-203ENST00000577427 E9PCH4 1651 aa27.41■■□□□ 1.98
SCO1-203ENST00000577427 PLA2R1Q13018 1463 aa27.41■■□□□ 1.98
SCO1-203ENST00000577427 AFAP1Q8N556 730 aa27.41■■□□□ 1.98
SCO1-203ENST00000577427 ZNF518AQ6AHZ1 1483 aa27.39■■□□□ 1.97
SCO1-203ENST00000577427 KIDINS220Q9ULH0 1771 aa27.39■■□□□ 1.97
SCO1-203ENST00000577427 GTF3C3Q9Y5Q9 886 aa27.38■■□□□ 1.97
SCO1-203ENST00000577427 SPHKAPQ2M3C7 1700 aa27.38■■□□□ 1.97
SCO1-203ENST00000577427 TRPM1Q7Z4N2 1603 aa27.38■■□□□ 1.97
SCO1-203ENST00000577427 USP47Q96K76 1375 aa27.37■■□□□ 1.97
SCO1-203ENST00000577427 VWDEQ8N2E2 1590 aa27.36■■□□□ 1.97
SCO1-203ENST00000577427 CD109Q6YHK3 1445 aa27.35■■□□□ 1.97
SCO1-203ENST00000577427 PRDM15P57071 1507 aaPredicted RBP27.35■■□□□ 1.97
SCO1-203ENST00000577427 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
SCO1-203ENST00000577427 CEP152O94986 1710 aa27.34■■□□□ 1.97
SCO1-203ENST00000577427 TRPM2O94759 1503 aa27.33■■□□□ 1.97
SCO1-203ENST00000577427 LAMC1P11047 1609 aa27.33■■□□□ 1.97
SCO1-203ENST00000577427 BCORL1Q5H9F3 1711 aa27.32■■□□□ 1.96
SCO1-203ENST00000577427 KANK1Q14678 1352 aa27.32■■□□□ 1.96
SCO1-203ENST00000577427 A2MP01023 1474 aa27.3■■□□□ 1.96
SCO1-203ENST00000577427 DHX29Q7Z478 1369 aaKnown RBP27.3■■□□□ 1.96
SCO1-203ENST00000577427 DCAF11Q8TEB1 546 aa27.3■■□□□ 1.96
SCO1-203ENST00000577427 MROH1Q8NDA8 1641 aa27.3■■□□□ 1.96
SCO1-203ENST00000577427 PRAG1Q86YV5 1406 aa27.29■■□□□ 1.96
SCO1-203ENST00000577427 HECW2Q9P2P5 1572 aa27.29■■□□□ 1.96
SCO1-203ENST00000577427 POGZQ7Z3K3 1410 aa27.29■■□□□ 1.96
SCO1-203ENST00000577427 RNF17Q9BXT8 1623 aaKnown RBP27.27■■□□□ 1.96
SCO1-203ENST00000577427 NEO1Q92859 1461 aa27.27■■□□□ 1.96
SCO1-203ENST00000577427 KIF7Q2M1P5 1343 aa27.27■■□□□ 1.96
SCO1-203ENST00000577427 ARID4BQ4LE39 1312 aaPredicted RBP27.27■■□□□ 1.96
SCO1-203ENST00000577427 C11orf95C9JLR9 678 aaPredicted RBP27.26■■□□□ 1.95
SCO1-203ENST00000577427 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
SCO1-203ENST00000577427 KDM2AQ9Y2K7 1162 aa27.24■■□□□ 1.95
SCO1-203ENST00000577427 MLH3Q9UHC1 1453 aa27.24■■□□□ 1.95
SCO1-203ENST00000577427 MAP3K4Q9Y6R4 1608 aa27.24■■□□□ 1.95
SCO1-203ENST00000577427 CARD11Q9BXL7 1154 aa27.23■■□□□ 1.95
SCO1-203ENST00000577427 PTPRTO14522 1441 aa27.23■■□□□ 1.95
SCO1-203ENST00000577427 RIMBP3CA6NJZ7 1639 aa27.22■■□□□ 1.95
SCO1-203ENST00000577427 RIMBP3BA6NNM3 1639 aa27.22■■□□□ 1.95
SCO1-203ENST00000577427 RIMBP3Q9UFD9 1639 aa27.22■■□□□ 1.95
SCO1-203ENST00000577427 ROCK2O75116 1388 aaKnown RBP27.21■■□□□ 1.95
SCO1-203ENST00000577427 CLTCL1P53675 1640 aa27.21■■□□□ 1.95
SCO1-203ENST00000577427 NEURL4Q96JN8 1562 aa27.2■■□□□ 1.95
SCO1-203ENST00000577427 GLI2P10070 1586 aa27.2■■□□□ 1.94
SCO1-203ENST00000577427 EFCAB6Q5THR3 1501 aa27.19■■□□□ 1.94
SCO1-203ENST00000577427 LMTK2Q8IWU2 1503 aa27.18■■□□□ 1.94
SCO1-203ENST00000577427 GPRASP1Q5JY77 1395 aa27.17■■□□□ 1.94
SCO1-203ENST00000577427 KIF3BO15066 747 aa27.16■■□□□ 1.94
SCO1-203ENST00000577427 ABCA6Q8N139 1617 aa27.16■■□□□ 1.94
SCO1-203ENST00000577427 MADDQ8WXG6 1647 aa27.14■■□□□ 1.94
SCO1-203ENST00000577427 RGL3Q3MIN7 710 aa27.14■■□□□ 1.94
SCO1-203ENST00000577427 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.94
SCO1-203ENST00000577427 RICTORQ6R327 1708 aa27.14■■□□□ 1.93
SCO1-203ENST00000577427 FRMPD1Q5SYB0 1578 aa27.13■■□□□ 1.93
SCO1-203ENST00000577427 KIF1BO60333 1816 aa27.13■■□□□ 1.93
SCO1-203ENST00000577427 STAC3Q96MF2 364 aa27.09■■□□□ 1.93
SCO1-203ENST00000577427 KIAA1210Q9ULL0 1709 aa27.07■■□□□ 1.92
SCO1-203ENST00000577427 PRKRIP1Q9H875 184 aaPredicted RBP27.06■■□□□ 1.92
SCO1-203ENST00000577427 DIP2CQ9Y2E4 1556 aa27.06■■□□□ 1.92
SCO1-203ENST00000577427 IQGAP1P46940 1657 aa27.04■■□□□ 1.92
SCO1-203ENST00000577427 ST20-MTHFSA0A0A6YYL1 179 aa27.04■■□□□ 1.92
SCO1-203ENST00000577427 IFT172Q9UG01 1749 aa27.04■■□□□ 1.92
SCO1-203ENST00000577427 DIP2BQ9P265 1576 aa27.03■■□□□ 1.92
SCO1-203ENST00000577427 ZC3H13Q5T200 1668 aaKnown RBP27■■□□□ 1.91
SCO1-203ENST00000577427 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
SCO1-203ENST00000577427 CAMSAP1Q5T5Y3 1602 aa26.99■■□□□ 1.91
SCO1-203ENST00000577427 COL17A1Q9UMD9 1497 aaPredicted RBP26.98■■□□□ 1.91
SCO1-203ENST00000577427 MYOM2P54296 1465 aa26.97■■□□□ 1.91
SCO1-203ENST00000577427 MROH2AA6NES4 1674 aa26.97■■□□□ 1.91
SCO1-203ENST00000577427 ABCC3O15438 1527 aa26.97■■□□□ 1.91
SCO1-203ENST00000577427 NBPF1Q3BBV0 1214 aa26.97■■□□□ 1.91
SCO1-203ENST00000577427 POLR3GLQ9BT43 218 aa26.97■■□□□ 1.91
SCO1-203ENST00000577427 ZMYM4Q5VZL5 1548 aa26.95■■□□□ 1.9
SCO1-203ENST00000577427 UGGT1Q9NYU2 1555 aa26.94■■□□□ 1.9
SCO1-203ENST00000577427 ADGRB3O60242 1522 aa26.93■■□□□ 1.9
SCO1-203ENST00000577427 RAPGEF3O95398 923 aa26.89■■□□□ 1.9
SCO1-203ENST00000577427 NPATQ14207 1427 aa26.89■■□□□ 1.89
SCO1-203ENST00000577427 KTN1Q86UP2 1357 aaKnown RBP26.88■■□□□ 1.89
SCO1-203ENST00000577427 SCAF11Q99590 1463 aaKnown RBP26.87■■□□□ 1.89
SCO1-203ENST00000577427 MRS2Q9HD23 443 aa26.87■■□□□ 1.89
SCO1-203ENST00000577427 PPLO60437 1756 aa26.86■■□□□ 1.89
SCO1-203ENST00000577427 TSPOAP1O95153 1857 aa26.86■■□□□ 1.89
SCO1-203ENST00000577427 CFAP65Q6ZU64 1925 aaKnown RBP26.84■■□□□ 1.89
SCO1-203ENST00000577427 GGT6Q6P531 493 aa26.83■■□□□ 1.89
SCO1-203ENST00000577427 TESK2Q96S53 571 aa26.83■■□□□ 1.89
SCO1-203ENST00000577427 PIK3C2BO00750 1634 aa26.83■■□□□ 1.89
SCO1-203ENST00000577427 SIGLEC1Q9BZZ2 1709 aa26.83■■□□□ 1.89
SCO1-203ENST00000577427 NRXN1Q9ULB1 1477 aa26.82■■□□□ 1.88
SCO1-203ENST00000577427 TMF1P82094 1093 aa26.82■■□□□ 1.88
SCO1-203ENST00000577427 HNRNPUQ00839 825 aaKnown RBP eCLIP26.82■■□□□ 1.88
SCO1-203ENST00000577427 EIF3AQ14152 1382 aaKnown RBP26.81■■□□□ 1.88
SCO1-203ENST00000577427 WASHC2CQ9Y4E1 1318 aa26.81■■□□□ 1.88
SCO1-203ENST00000577427 REREQ9P2R6 1566 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms