RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
TRAP1-210ENST00000574494 PRDM15P57071 1507 aaPredicted RBP20.29■□□□□ 0.84
TRAP1-210ENST00000574494 RNF17Q9BXT8 1623 aaKnown RBP20.29■□□□□ 0.84
TRAP1-210ENST00000574494 DHX29Q7Z478 1369 aaKnown RBP20.29■□□□□ 0.84
TRAP1-210ENST00000574494 A2MP01023 1474 aa20.29■□□□□ 0.84
TRAP1-210ENST00000574494 FRMPD1Q5SYB0 1578 aa20.29■□□□□ 0.84
TRAP1-210ENST00000574494 KANK1Q14678 1352 aa20.27■□□□□ 0.84
TRAP1-210ENST00000574494 TET3O43151 1660 aa20.26■□□□□ 0.83
TRAP1-210ENST00000574494 DIP2CQ9Y2E4 1556 aa20.26■□□□□ 0.83
TRAP1-210ENST00000574494 RPRD2Q5VT52 1461 aaKnown RBP20.26■□□□□ 0.83
TRAP1-210ENST00000574494 ANKRD30BQ9BXX2 1392 aa20.26■□□□□ 0.83
TRAP1-210ENST00000574494 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
TRAP1-210ENST00000574494 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
TRAP1-210ENST00000574494 PKD2Q13563 968 aa20.23■□□□□ 0.83
TRAP1-210ENST00000574494 VWDEQ8N2E2 1590 aa20.22■□□□□ 0.83
TRAP1-210ENST00000574494 MROH1Q8NDA8 1641 aa20.2■□□□□ 0.82
TRAP1-210ENST00000574494 REREQ9P2R6 1566 aa20.2■□□□□ 0.82
TRAP1-210ENST00000574494 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
TRAP1-210ENST00000574494 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
TRAP1-210ENST00000574494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.822e-7■■□□□ 11.7
TRAP1-210ENST00000574494 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
TRAP1-210ENST00000574494 E9PCH4 1651 aa20.16■□□□□ 0.82
TRAP1-210ENST00000574494 RAPGEF3O95398 923 aa20.16■□□□□ 0.82
TRAP1-210ENST00000574494 ARHGEF40Q8TER5 1519 aa20.16■□□□□ 0.82
TRAP1-210ENST00000574494 KIF3BO15066 747 aa20.15■□□□□ 0.82
TRAP1-210ENST00000574494 ATP10AO60312 1499 aa20.15■□□□□ 0.82
TRAP1-210ENST00000574494 CEP152O94986 1710 aa20.15■□□□□ 0.82
TRAP1-210ENST00000574494 EFCAB6Q5THR3 1501 aa20.14■□□□□ 0.81
TRAP1-210ENST00000574494 FOXD1Q16676 465 aa20.14■□□□□ 0.81
TRAP1-210ENST00000574494 CCDC144AA2RUR9 1427 aa20.13■□□□□ 0.81
TRAP1-210ENST00000574494 TRPM2O94759 1503 aa20.12■□□□□ 0.81
TRAP1-210ENST00000574494 AGLP35573 1532 aa20.09■□□□□ 0.81
TRAP1-210ENST00000574494 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
TRAP1-210ENST00000574494 YEATS2Q9ULM3 1422 aa20.09■□□□□ 0.81
TRAP1-210ENST00000574494 ZNF316A6NFI3 1004 aaPredicted RBP20.08■□□□□ 0.81
TRAP1-210ENST00000574494 CAMSAP1Q5T5Y3 1602 aa20.08■□□□□ 0.8
TRAP1-210ENST00000574494 ABCC3O15438 1527 aa20.06■□□□□ 0.8
TRAP1-210ENST00000574494 PTPRTO14522 1441 aa20.02■□□□□ 0.8
TRAP1-210ENST00000574494 NEURL4Q96JN8 1562 aa20.02■□□□□ 0.8
TRAP1-210ENST00000574494 KIF1BO60333 1816 aa20.01■□□□□ 0.79
TRAP1-210ENST00000574494 PLA2R1Q13018 1463 aa20■□□□□ 0.79
TRAP1-210ENST00000574494 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
TRAP1-210ENST00000574494 CLTCL1P53675 1640 aa19.99■□□□□ 0.79
TRAP1-210ENST00000574494 COL17A1Q9UMD9 1497 aaPredicted RBP19.98■□□□□ 0.79
TRAP1-210ENST00000574494 GGT6Q6P531 493 aa19.97■□□□□ 0.79
TRAP1-210ENST00000574494 ARHGAP31Q2M1Z3 1444 aa19.96■□□□□ 0.79
TRAP1-210ENST00000574494 CNTLNQ9NXG0 1405 aa19.96■□□□□ 0.79
TRAP1-210ENST00000574494 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
TRAP1-210ENST00000574494 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
TRAP1-210ENST00000574494 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
TRAP1-210ENST00000574494 UHRF1BP1Q6BDS2 1440 aa19.95■□□□□ 0.78
TRAP1-210ENST00000574494 NPATQ14207 1427 aa19.93■□□□□ 0.78
TRAP1-210ENST00000574494 RALGAPBQ86X10 1494 aa19.92■□□□□ 0.78
TRAP1-210ENST00000574494 CLTCQ00610 1675 aaKnown RBP19.9■□□□□ 0.78
TRAP1-210ENST00000574494 PREX1Q8TCU6 1659 aa19.9■□□□□ 0.78
TRAP1-210ENST00000574494 SPATA31E1Q6ZUB1 1445 aa19.89■□□□□ 0.77
TRAP1-210ENST00000574494 SIGLEC1Q9BZZ2 1709 aa19.88■□□□□ 0.77
TRAP1-210ENST00000574494 STAC3Q96MF2 364 aa19.88■□□□□ 0.77
TRAP1-210ENST00000574494 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
TRAP1-210ENST00000574494 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
TRAP1-210ENST00000574494 LAMC1P11047 1609 aa19.87■□□□□ 0.77
TRAP1-210ENST00000574494 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
TRAP1-210ENST00000574494 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
TRAP1-210ENST00000574494 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
TRAP1-210ENST00000574494 NOS1P29475 1434 aa19.85■□□□□ 0.77
TRAP1-210ENST00000574494 MROH2AA6NES4 1674 aa19.84■□□□□ 0.77
TRAP1-210ENST00000574494 DIEXFQ68CQ4 756 aaKnown RBP19.84■□□□□ 0.77
TRAP1-210ENST00000574494 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
TRAP1-210ENST00000574494 PRAG1Q86YV5 1406 aa19.84■□□□□ 0.77
TRAP1-210ENST00000574494 SYNMO15061 1565 aa19.83■□□□□ 0.77
TRAP1-210ENST00000574494 DCAF11Q8TEB1 546 aa19.83■□□□□ 0.77
TRAP1-210ENST00000574494 MADDQ8WXG6 1647 aa19.83■□□□□ 0.76
TRAP1-210ENST00000574494 MYOM2P54296 1465 aa19.82■□□□□ 0.76
TRAP1-210ENST00000574494 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
TRAP1-210ENST00000574494 UGGT1Q9NYU2 1555 aa19.82■□□□□ 0.76
TRAP1-210ENST00000574494 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
TRAP1-210ENST00000574494 NBPF8Q3BBV2 869 aa19.8■□□□□ 0.76
TRAP1-210ENST00000574494 ZNF326Q5BKZ1 582 aaKnown RBP19.8■□□□□ 0.76
TRAP1-210ENST00000574494 ESF1Q9H501 851 aaKnown RBP19.8■□□□□ 0.76
TRAP1-210ENST00000574494 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
TRAP1-210ENST00000574494 RGL3Q3MIN7 710 aa19.79■□□□□ 0.76
TRAP1-210ENST00000574494 PPLO60437 1756 aa19.79■□□□□ 0.76
TRAP1-210ENST00000574494 SPATA31D1Q6ZQQ2 1576 aa19.78■□□□□ 0.76
TRAP1-210ENST00000574494 FER1L4A9Z1Z3 1794 aa19.76■□□□□ 0.75
TRAP1-210ENST00000574494 KDM2AQ9Y2K7 1162 aa19.76■□□□□ 0.75
TRAP1-210ENST00000574494 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
TRAP1-210ENST00000574494 ROCK2O75116 1388 aaKnown RBP19.75■□□□□ 0.75
TRAP1-210ENST00000574494 SLC52A1Q9NWF4 448 aa19.75■□□□□ 0.75
TRAP1-210ENST00000574494 USP47Q96K76 1375 aa19.73■□□□□ 0.75
TRAP1-210ENST00000574494 RPGRIP1LQ68CZ1 1315 aa19.73■□□□□ 0.75
TRAP1-210ENST00000574494 GPRASP1Q5JY77 1395 aa19.72■□□□□ 0.75
TRAP1-210ENST00000574494 HSPA5P11021 654 aaKnown RBP19.72■□□□□ 0.75
TRAP1-210ENST00000574494 TMEM131LA2VDJ0 1609 aa19.7■□□□□ 0.74
TRAP1-210ENST00000574494 MLECQ14165 292 aa19.7■□□□□ 0.74
TRAP1-210ENST00000574494 CARD11Q9BXL7 1154 aa19.7■□□□□ 0.74
TRAP1-210ENST00000574494 KDM5AP29375 1690 aaKnown RBP19.7■□□□□ 0.74
TRAP1-210ENST00000574494 MYO5BQ9ULV0 1848 aa19.69■□□□□ 0.74
TRAP1-210ENST00000574494 IQGAP1P46940 1657 aa19.68■□□□□ 0.74
TRAP1-210ENST00000574494 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
TRAP1-210ENST00000574494 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms