RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.91■□□□□ 0.14
NCBP3-203ENST00000574379 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
NCBP3-203ENST00000574379 LRRC7Q96NW7 1537 aa15.89■□□□□ 0.13
NCBP3-203ENST00000574379 NPHP4O75161 1426 aaPredicted RBP15.89■□□□□ 0.13
NCBP3-203ENST00000574379 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
NCBP3-203ENST00000574379 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
NCBP3-203ENST00000574379 ABCC1P33527 1531 aa15.88■□□□□ 0.13
NCBP3-203ENST00000574379 CDC42BPAQ5VT25 1732 aa15.87■□□□□ 0.13
NCBP3-203ENST00000574379 CDC42BPBQ9Y5S2 1711 aa15.87■□□□□ 0.13
NCBP3-203ENST00000574379 SPAG9O60271 1321 aaKnown RBP15.86■□□□□ 0.13
NCBP3-203ENST00000574379 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
NCBP3-203ENST00000574379 TNRQ92752 1358 aa15.85■□□□□ 0.13
NCBP3-203ENST00000574379 SYNMO15061 1565 aa15.84■□□□□ 0.13
NCBP3-203ENST00000574379 SRCAPQ6ZRS2 3230 aa15.84■□□□□ 0.13
NCBP3-203ENST00000574379 THEMISQ8N1K5 641 aaPredicted RBP15.84■□□□□ 0.13
NCBP3-203ENST00000574379 TIAM1Q13009 1591 aa15.83■□□□□ 0.13
NCBP3-203ENST00000574379 STRCP1A6NGW2 1772 aa15.83■□□□□ 0.12
NCBP3-203ENST00000574379 FBXO31Q5XUX0 539 aaPredicted RBP15.83■□□□□ 0.12
NCBP3-203ENST00000574379 EHBP1L1Q8N3D4 1523 aa15.83■□□□□ 0.12
NCBP3-203ENST00000574379 IQGAP1P46940 1657 aa15.83■□□□□ 0.12
NCBP3-203ENST00000574379 MEX3CQ5U5Q3 659 aaKnown RBP15.82■□□□□ 0.12
NCBP3-203ENST00000574379 SAMD9LQ8IVG5 1584 aa15.8■□□□□ 0.12
NCBP3-203ENST00000574379 FAM135AQ9P2D6 1515 aa15.79■□□□□ 0.12
NCBP3-203ENST00000574379 A2MP01023 1474 aa15.79■□□□□ 0.12
NCBP3-203ENST00000574379 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
NCBP3-203ENST00000574379 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
NCBP3-203ENST00000574379 HNRNPMP52272 730 aaKnown RBP eCLIP15.77■□□□□ 0.12
NCBP3-203ENST00000574379 UGGT1Q9NYU2 1555 aa15.77■□□□□ 0.11
NCBP3-203ENST00000574379 MED14O60244 1454 aa15.77■□□□□ 0.11
NCBP3-203ENST00000574379 DEPDC5O75140 1603 aa15.76■□□□□ 0.11
NCBP3-203ENST00000574379 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
NCBP3-203ENST00000574379 SYCP2Q9BX26 1530 aa15.75■□□□□ 0.11
NCBP3-203ENST00000574379 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
NCBP3-203ENST00000574379 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
NCBP3-203ENST00000574379 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
NCBP3-203ENST00000574379 RXRBP28702 533 aa15.73■□□□□ 0.11
NCBP3-203ENST00000574379 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
NCBP3-203ENST00000574379 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
NCBP3-203ENST00000574379 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
NCBP3-203ENST00000574379 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
NCBP3-203ENST00000574379 JCADQ9P266 1359 aa15.7■□□□□ 0.1
NCBP3-203ENST00000574379 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
NCBP3-203ENST00000574379 NLRP1Q9C000 1473 aa15.69■□□□□ 0.1
NCBP3-203ENST00000574379 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
NCBP3-203ENST00000574379 PZPP20742 1482 aa15.68■□□□□ 0.1
NCBP3-203ENST00000574379 CCNB3Q8WWL7 1395 aa15.68■□□□□ 0.1
NCBP3-203ENST00000574379 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
NCBP3-203ENST00000574379 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
NCBP3-203ENST00000574379 MIA2Q96PC5 1412 aa15.68■□□□□ 0.1
NCBP3-203ENST00000574379 XIRP1Q702N8 1843 aaKnown RBP15.67■□□□□ 0.1
NCBP3-203ENST00000574379 NUTM2BA6NNL0 878 aaPredicted RBP15.67■□□□□ 0.1
NCBP3-203ENST00000574379 NUTM2EB1AL46 878 aaPredicted RBP15.67■□□□□ 0.1
NCBP3-203ENST00000574379 NUTM2DQ5VT03 806 aaPredicted RBP15.67■□□□□ 0.1
NCBP3-203ENST00000574379 NUTM2AQ8IVF1 878 aaPredicted RBP15.67■□□□□ 0.1
NCBP3-203ENST00000574379 RBM33Q96EV2 1170 aaKnown RBP15.67■□□□□ 0.1
NCBP3-203ENST00000574379 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
NCBP3-203ENST00000574379 ADGBQ8N7X0 1667 aa15.65■□□□□ 0.1
NCBP3-203ENST00000574379 KIF3BO15066 747 aa15.65■□□□□ 0.1
NCBP3-203ENST00000574379 TMEM94Q12767 1356 aa15.64■□□□□ 0.09
NCBP3-203ENST00000574379 KANK4Q5T7N3 995 aaPredicted RBP15.64■□□□□ 0.09
NCBP3-203ENST00000574379 KDM5DQ9BY66 1539 aa15.63■□□□□ 0.09
NCBP3-203ENST00000574379 LRP6O75581 1613 aa15.62■□□□□ 0.09
NCBP3-203ENST00000574379 ZC3H13Q5T200 1668 aaKnown RBP15.62■□□□□ 0.09
NCBP3-203ENST00000574379 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
NCBP3-203ENST00000574379 TXNDC2Q86VQ3 553 aa15.61■□□□□ 0.09
NCBP3-203ENST00000574379 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
NCBP3-203ENST00000574379 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
NCBP3-203ENST00000574379 SPATA31A6Q5VVP1 1343 aa15.6■□□□□ 0.09
NCBP3-203ENST00000574379 KIAA1107Q9UPP5 1409 aa15.6■□□□□ 0.09
NCBP3-203ENST00000574379 SCAF11Q99590 1463 aaKnown RBP15.59■□□□□ 0.09
NCBP3-203ENST00000574379 APLP2Q06481 763 aa15.59■□□□□ 0.09
NCBP3-203ENST00000574379 CAMSAP2Q08AD1 1489 aa15.58■□□□□ 0.08
NCBP3-203ENST00000574379 SETBP1Q9Y6X0 1596 aa15.58■□□□□ 0.08
NCBP3-203ENST00000574379 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
NCBP3-203ENST00000574379 SLAIN2Q9P270 581 aa15.57■□□□□ 0.08
NCBP3-203ENST00000574379 EID1Q9Y6B2 187 aa15.56■□□□□ 0.08
NCBP3-203ENST00000574379 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
NCBP3-203ENST00000574379 CDK12Q9NYV4 1490 aaPredicted RBP15.56■□□□□ 0.08
NCBP3-203ENST00000574379 MBD5Q9P267 1494 aa15.55■□□□□ 0.08
NCBP3-203ENST00000574379 MSH6P52701 1360 aa15.55■□□□□ 0.08
NCBP3-203ENST00000574379 DHX29Q7Z478 1369 aaKnown RBP15.55■□□□□ 0.08
NCBP3-203ENST00000574379 ZNF644Q9H582 1327 aaPredicted RBP15.55■□□□□ 0.08
NCBP3-203ENST00000574379 LTKP29376 864 aa15.55■□□□□ 0.08
NCBP3-203ENST00000574379 ARHGEF5Q12774 1597 aa15.54■□□□□ 0.08
NCBP3-203ENST00000574379 AFF2P51816 1311 aa15.54■□□□□ 0.08
NCBP3-203ENST00000574379 RGS12O14924 1447 aa15.53■□□□□ 0.08
NCBP3-203ENST00000574379 PTPN23Q9H3S7 1636 aa15.52■□□□□ 0.08
NCBP3-203ENST00000574379 COL16A1Q07092 1604 aaPredicted RBP15.51■□□□□ 0.07
NCBP3-203ENST00000574379 BCANQ96GW7 911 aa15.51■□□□□ 0.07
NCBP3-203ENST00000574379 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
NCBP3-203ENST00000574379 KCNA6P17658 529 aa15.5■□□□□ 0.07
NCBP3-203ENST00000574379 KCNA4P22459 653 aa15.5■□□□□ 0.07
NCBP3-203ENST00000574379 CCDC141Q6ZP82 1450 aa15.5■□□□□ 0.07
NCBP3-203ENST00000574379 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
NCBP3-203ENST00000574379 UBR1Q8IWV7 1749 aa15.49■□□□□ 0.07
NCBP3-203ENST00000574379 RBM6P78332 1123 aaKnown RBP15.49■□□□□ 0.07
NCBP3-203ENST00000574379 C14orf37Q86TY3 774 aa15.49■□□□□ 0.07
NCBP3-203ENST00000574379 SLC26A8Q96RN1 970 aa15.49■□□□□ 0.07
NCBP3-203ENST00000574379 QTRT2Q9H974 415 aaKnown RBP15.49■□□□□ 0.07
NCBP3-203ENST00000574379 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms