RNA–Protein interactions for RNA: ENST00000571489.5

PCTP-204, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best)

Gene PCTP, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-204ENST00000571489 CFAP53Q96M91 514 aa9.91□□□□□ -0.82
PCTP-204ENST00000571489 PANK3Q9H999 370 aa9.91□□□□□ -0.82
PCTP-204ENST00000571489 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
PCTP-204ENST00000571489 PTPRGP23470 1445 aa9.91□□□□□ -0.82
PCTP-204ENST00000571489 EFCAB2Q5VUJ9 269 aa9.9□□□□□ -0.82
PCTP-204ENST00000571489 KANK1Q14678 1352 aa9.9□□□□□ -0.82
PCTP-204ENST00000571489 WASHC2CQ9Y4E1 1318 aa9.9□□□□□ -0.82
PCTP-204ENST00000571489 EIF4G3O43432 1585 aaKnown RBP9.9□□□□□ -0.82
PCTP-204ENST00000571489 C9orf84Q5VXU9 1444 aa9.9□□□□□ -0.83
PCTP-204ENST00000571489 SAMD9Q5K651 1589 aa9.88□□□□□ -0.83
PCTP-204ENST00000571489 CAMSAP2Q08AD1 1489 aa9.88□□□□□ -0.83
PCTP-204ENST00000571489 EIF3AQ14152 1382 aaKnown RBP9.88□□□□□ -0.83
PCTP-204ENST00000571489 NPM1P06748 294 aaKnown RBP eCLIP9.88□□□□□ -0.83
PCTP-204ENST00000571489 CENPQQ7L2Z9 268 aaPredicted RBP9.88□□□□□ -0.83
PCTP-204ENST00000571489 CRBNQ96SW2 442 aa9.87□□□□□ -0.83
PCTP-204ENST00000571489 PLIN1O60240 522 aa9.86□□□□□ -0.83
PCTP-204ENST00000571489 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
PCTP-204ENST00000571489 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
PCTP-204ENST00000571489 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
PCTP-204ENST00000571489 EIF5BO60841 1220 aaKnown RBP9.84□□□□□ -0.83
PCTP-204ENST00000571489 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
PCTP-204ENST00000571489 PLB1Q6P1J6 1458 aa9.84□□□□□ -0.83
PCTP-204ENST00000571489 HSP90AA1P07900 732 aaKnown RBP9.84□□□□□ -0.83
PCTP-204ENST00000571489 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
PCTP-204ENST00000571489 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
PCTP-204ENST00000571489 GCC2Q8IWJ2 1684 aa9.83□□□□□ -0.84
PCTP-204ENST00000571489 SPAG9O60271 1321 aaKnown RBP9.83□□□□□ -0.84
PCTP-204ENST00000571489 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
PCTP-204ENST00000571489 FTSJ3Q8IY81 847 aaKnown RBP9.83□□□□□ -0.84
PCTP-204ENST00000571489 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
PCTP-204ENST00000571489 TEX14Q8IWB6 1497 aa9.81□□□□□ -0.84
PCTP-204ENST00000571489 BACH2Q9BYV9 841 aa9.81□□□□□ -0.84
PCTP-204ENST00000571489 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
PCTP-204ENST00000571489 GPATCH8Q9UKJ3 1502 aaKnown RBP9.81□□□□□ -0.84
PCTP-204ENST00000571489 E9PSI1 815 aa9.81□□□□□ -0.84
PCTP-204ENST00000571489 NBPF1Q3BBV0 1214 aa9.81□□□□□ -0.84
PCTP-204ENST00000571489 NUP153P49790 1475 aaKnown RBP9.81□□□□□ -0.84
PCTP-204ENST00000571489 RALGAPBQ86X10 1494 aa9.81□□□□□ -0.84
PCTP-204ENST00000571489 KIAA0556O60303 1618 aa9.8□□□□□ -0.84
PCTP-204ENST00000571489 RAPGEF6Q8TEU7 1601 aa9.8□□□□□ -0.84
PCTP-204ENST00000571489 CENPJQ9HC77 1338 aaPredicted RBP9.8□□□□□ -0.84
PCTP-204ENST00000571489 DNMT1P26358 1616 aaKnown RBP9.8□□□□□ -0.84
PCTP-204ENST00000571489 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
PCTP-204ENST00000571489 CCDC146Q8IYE0 955 aa9.8□□□□□ -0.84
PCTP-204ENST00000571489 CGNL1Q0VF96 1302 aa9.8□□□□□ -0.84
PCTP-204ENST00000571489 PMFBP1Q8TBY8 1022 aa9.79□□□□□ -0.84
PCTP-204ENST00000571489 MAPK8IP3Q9UPT6 1336 aa9.79□□□□□ -0.84
PCTP-204ENST00000571489 ITSN2Q9NZM3 1697 aa9.79□□□□□ -0.84
PCTP-204ENST00000571489 MAGI3Q5TCQ9 1506 aa9.79□□□□□ -0.84
PCTP-204ENST00000571489 ANP32BQ92688 251 aaKnown RBP9.79□□□□□ -0.84
PCTP-204ENST00000571489 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
PCTP-204ENST00000571489 DHX29Q7Z478 1369 aaKnown RBP9.79□□□□□ -0.84
PCTP-204ENST00000571489 DISP1Q96F81 1524 aa9.79□□□□□ -0.84
PCTP-204ENST00000571489 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
PCTP-204ENST00000571489 ERBINQ96RT1 1412 aa9.78□□□□□ -0.84
PCTP-204ENST00000571489 CCDC141Q6ZP82 1450 aa9.78□□□□□ -0.84
PCTP-204ENST00000571489 PLEKHH2Q8IVE3 1493 aa9.78□□□□□ -0.84
PCTP-204ENST00000571489 ARHGEF11O15085 1522 aa9.78□□□□□ -0.84
PCTP-204ENST00000571489 KIF3BO15066 747 aa9.78□□□□□ -0.84
PCTP-204ENST00000571489 KIF14Q15058 1648 aa9.77□□□□□ -0.84
PCTP-204ENST00000571489 RWDD1Q9H446 243 aaPredicted RBP9.77□□□□□ -0.84
PCTP-204ENST00000571489 PZPP20742 1482 aa9.77□□□□□ -0.85
PCTP-204ENST00000571489 APAF1O14727 1248 aa9.77□□□□□ -0.85
PCTP-204ENST00000571489 MYH16Q9H6N6 1097 aa9.77□□□□□ -0.85
PCTP-204ENST00000571489 ARHGAP5Q13017 1502 aa9.77□□□□□ -0.85
PCTP-204ENST00000571489 SPATA31E1Q6ZUB1 1445 aa9.77□□□□□ -0.85
PCTP-204ENST00000571489 PPP2R1AP30153 589 aa9.76□□□□□ -0.85
PCTP-204ENST00000571489 GSE1Q14687 1217 aa9.76□□□□□ -0.85
PCTP-204ENST00000571489 NUP160Q12769 1436 aa9.76□□□□□ -0.85
PCTP-204ENST00000571489 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
PCTP-204ENST00000571489 CEP170Q5SW79 1584 aa9.76□□□□□ -0.85
PCTP-204ENST00000571489 ARXQ96QS3 562 aa9.76□□□□□ -0.85
PCTP-204ENST00000571489 CHMP4BQ9H444 224 aaKnown RBP9.76□□□□□ -0.85
PCTP-204ENST00000571489 ARHGEF12Q9NZN5 1544 aa9.76□□□□□ -0.85
PCTP-204ENST00000571489 PNNQ9H307 717 aaKnown RBP9.75□□□□□ -0.85
PCTP-204ENST00000571489 RNF123Q5XPI4 1314 aa9.75□□□□□ -0.85
PCTP-204ENST00000571489 UHRF1BP1Q6BDS2 1440 aa9.74□□□□□ -0.85
PCTP-204ENST00000571489 U2SURPO15042 1029 aaKnown RBP9.74□□□□□ -0.85
PCTP-204ENST00000571489 ADGRL2O95490 1459 aa9.74□□□□□ -0.85
PCTP-204ENST00000571489 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
PCTP-204ENST00000571489 U2AF1L5P0DN76 240 aaPredicted RBP9.73□□□□□ -0.85
PCTP-204ENST00000571489 U2AF1Q01081 240 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCTP-204ENST00000571489 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
PCTP-204ENST00000571489 AAMPQ13685 434 aa9.73□□□□□ -0.85
PCTP-204ENST00000571489 GOLGA6L22H0YM25 854 aa9.72□□□□□ -0.85
PCTP-204ENST00000571489 SHANK2Q9UPX8 1470 aa9.72□□□□□ -0.85
PCTP-204ENST00000571489 LRPPRCP42704 1394 aaKnown RBP9.72□□□□□ -0.85
PCTP-204ENST00000571489 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
PCTP-204ENST00000571489 HSCBQ8IWL3 235 aa9.72□□□□□ -0.85
PCTP-204ENST00000571489 SLKQ9H2G2 1235 aaPredicted RBP9.72□□□□□ -0.85
PCTP-204ENST00000571489 IPO8O15397 1037 aaKnown RBP9.72□□□□□ -0.85
PCTP-204ENST00000571489 NFKBIBQ15653 356 aa9.72□□□□□ -0.85
PCTP-204ENST00000571489 KDM6BO15054 1643 aa9.72□□□□□ -0.85
PCTP-204ENST00000571489 POGKQ9P215 609 aa9.71□□□□□ -0.86
PCTP-204ENST00000571489 COG6Q9Y2V7 657 aa9.71□□□□□ -0.86
PCTP-204ENST00000571489 SCAPERQ9BY12 1400 aa9.71□□□□□ -0.86
PCTP-204ENST00000571489 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
PCTP-204ENST00000571489 GLIPR1L2Q4G1C9 344 aa9.7□□□□□ -0.86
PCTP-204ENST00000571489 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
PCTP-204ENST00000571489 TRIM44Q96DX7 344 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms