RNA–Protein interactions for RNA: ENST00000571489.5

PCTP-204, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best)

Gene PCTP, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-204ENST00000571489 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
PCTP-204ENST00000571489 SUPT5HO00267 1087 aaKnown RBP12.89□□□□□ -0.35
PCTP-204ENST00000571489 SHROOM4Q9ULL8 1493 aa12.87□□□□□ -0.35
PCTP-204ENST00000571489 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
PCTP-204ENST00000571489 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
PCTP-204ENST00000571489 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.44
PCTP-204ENST00000571489 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
PCTP-204ENST00000571489 HRCP23327 699 aa12.19□□□□□ -0.46
PCTP-204ENST00000571489 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
PCTP-204ENST00000571489 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
PCTP-204ENST00000571489 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
PCTP-204ENST00000571489 TRIM26Q12899 539 aaPredicted RBP11.99□□□□□ -0.49
PCTP-204ENST00000571489 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
PCTP-204ENST00000571489 ABCC9O60706 1549 aa11.97□□□□□ -0.49
PCTP-204ENST00000571489 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
PCTP-204ENST00000571489 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
PCTP-204ENST00000571489 PPARGC1BQ86YN6 1023 aaKnown RBP11.82□□□□□ -0.52
PCTP-204ENST00000571489 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
PCTP-204ENST00000571489 MYO15BQ96JP2 1530 aa11.79□□□□□ -0.52
PCTP-204ENST00000571489 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
PCTP-204ENST00000571489 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
PCTP-204ENST00000571489 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
PCTP-204ENST00000571489 CENPBP07199 599 aaPredicted RBP11.65□□□□□ -0.55
PCTP-204ENST00000571489 APLP2Q06481 763 aa11.64□□□□□ -0.55
PCTP-204ENST00000571489 TTBK1Q5TCY1 1321 aaPredicted RBP11.61□□□□□ -0.55
PCTP-204ENST00000571489 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
PCTP-204ENST00000571489 NACADO15069 1562 aa11.55□□□□□ -0.56
PCTP-204ENST00000571489 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
PCTP-204ENST00000571489 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
PCTP-204ENST00000571489 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
PCTP-204ENST00000571489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
PCTP-204ENST00000571489 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
PCTP-204ENST00000571489 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
PCTP-204ENST00000571489 MYT1Q01538 1121 aa11.33□□□□□ -0.6
PCTP-204ENST00000571489 YTHDC1Q96MU7 727 aaKnown RBP11.31□□□□□ -0.6
PCTP-204ENST00000571489 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
PCTP-204ENST00000571489 CECR2Q9BXF3 1484 aa11.3□□□□□ -0.6
PCTP-204ENST00000571489 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
PCTP-204ENST00000571489 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
PCTP-204ENST00000571489 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
PCTP-204ENST00000571489 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.61
PCTP-204ENST00000571489 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
PCTP-204ENST00000571489 EEA1Q15075 1411 aa11.2□□□□□ -0.62
PCTP-204ENST00000571489 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
PCTP-204ENST00000571489 BAZ1AQ9NRL2 1556 aaPredicted RBP11.19□□□□□ -0.62
PCTP-204ENST00000571489 CEP162Q5TB80 1403 aa11.16□□□□□ -0.62
PCTP-204ENST00000571489 TNIKQ9UKE5 1360 aa11.14□□□□□ -0.63
PCTP-204ENST00000571489 NEUROD1Q13562 356 aa11.12□□□□□ -0.63
PCTP-204ENST00000571489 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
PCTP-204ENST00000571489 WIZO95785 1651 aa11.1□□□□□ -0.63
PCTP-204ENST00000571489 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
PCTP-204ENST00000571489 ITGAEP38570 1179 aa11.06□□□□□ -0.64
PCTP-204ENST00000571489 NEFLP07196 543 aa11.05□□□□□ -0.64
PCTP-204ENST00000571489 CLIP1P30622 1438 aa11.04□□□□□ -0.64
PCTP-204ENST00000571489 WRNQ14191 1432 aaPredicted RBP eCLIP11.04□□□□□ -0.64
PCTP-204ENST00000571489 SMARCA4P51532 1647 aa11.02□□□□□ -0.65
PCTP-204ENST00000571489 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
PCTP-204ENST00000571489 TOP2AP11388 1531 aaKnown RBP11.01□□□□□ -0.65
PCTP-204ENST00000571489 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
PCTP-204ENST00000571489 SOGA1O94964 1423 aa11□□□□□ -0.65
PCTP-204ENST00000571489 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
PCTP-204ENST00000571489 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
PCTP-204ENST00000571489 BAZ1BQ9UIG0 1483 aaKnown RBP10.98□□□□□ -0.65
PCTP-204ENST00000571489 UNC13AQ9UPW8 1703 aa10.94□□□□□ -0.66
PCTP-204ENST00000571489 MIER1Q8N108 512 aa10.94□□□□□ -0.66
PCTP-204ENST00000571489 BICRAQ9NZM4 1560 aa10.92□□□□□ -0.66
PCTP-204ENST00000571489 FAM50AQ14320 339 aaKnown RBP10.9□□□□□ -0.66
PCTP-204ENST00000571489 VPS8Q8N3P4 1428 aa10.89□□□□□ -0.67
PCTP-204ENST00000571489 SMARCA2P51531 1590 aa10.88□□□□□ -0.67
PCTP-204ENST00000571489 ATAD2BQ9ULI0 1458 aa10.88□□□□□ -0.67
PCTP-204ENST00000571489 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
PCTP-204ENST00000571489 ANP32CO43423 234 aa10.81□□□□□ -0.68
PCTP-204ENST00000571489 RUSC2Q8N2Y8 1516 aa10.81□□□□□ -0.68
PCTP-204ENST00000571489 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
PCTP-204ENST00000571489 EIF4G1Q04637 1599 aaKnown RBP10.75□□□□□ -0.69
PCTP-204ENST00000571489 P3H3Q8IVL6 736 aa10.74□□□□□ -0.69
PCTP-204ENST00000571489 BCANQ96GW7 911 aa10.74□□□□□ -0.69
PCTP-204ENST00000571489 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
PCTP-204ENST00000571489 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
PCTP-204ENST00000571489 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
PCTP-204ENST00000571489 TONSLQ96HA7 1378 aa10.7□□□□□ -0.7
PCTP-204ENST00000571489 KIF21BO75037 1637 aa10.69□□□□□ -0.7
PCTP-204ENST00000571489 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
PCTP-204ENST00000571489 NCAPD3P42695 1498 aa10.69□□□□□ -0.7
PCTP-204ENST00000571489 FKBP8Q14318 412 aa10.68□□□□□ -0.7
PCTP-204ENST00000571489 KANK4Q5T7N3 995 aaPredicted RBP10.67□□□□□ -0.7
PCTP-204ENST00000571489 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
PCTP-204ENST00000571489 DHX57Q6P158 1386 aaKnown RBP10.65□□□□□ -0.7
PCTP-204ENST00000571489 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
PCTP-204ENST00000571489 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
PCTP-204ENST00000571489 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
PCTP-204ENST00000571489 CDK11AQ9UQ88 783 aaPredicted RBP10.63□□□□□ -0.71
PCTP-204ENST00000571489 MTUS2Q5JR59 1369 aa10.62□□□□□ -0.71
PCTP-204ENST00000571489 SYNJ1O43426 1573 aa10.62□□□□□ -0.71
PCTP-204ENST00000571489 CUX2O14529 1486 aa10.61□□□□□ -0.71
PCTP-204ENST00000571489 HMGXB3Q12766 1538 aa10.61□□□□□ -0.71
PCTP-204ENST00000571489 CARMIL1Q5VZK9 1371 aa10.61□□□□□ -0.71
PCTP-204ENST00000571489 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
PCTP-204ENST00000571489 POLR3GLQ9BT43 218 aa10.6□□□□□ -0.71
PCTP-204ENST00000571489 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms