RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
ATP2A3-209ENST00000571245 SHANK2Q9UPX8 1470 aa21.02■□□□□ 0.96
ATP2A3-209ENST00000571245 KIF15Q9NS87 1388 aa21.02■□□□□ 0.96
ATP2A3-209ENST00000571245 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
ATP2A3-209ENST00000571245 KDM5DQ9BY66 1539 aa21.01■□□□□ 0.95
ATP2A3-209ENST00000571245 ILDR1Q86SU0 546 aaPredicted RBP21.01■□□□□ 0.95
ATP2A3-209ENST00000571245 CROCC2H7BZ55 1655 aa21.01■□□□□ 0.95
ATP2A3-209ENST00000571245 DUOX2Q9NRD8 1548 aa21■□□□□ 0.95
ATP2A3-209ENST00000571245 FAM135AQ9P2D6 1515 aa21■□□□□ 0.95
ATP2A3-209ENST00000571245 ANKRD30AQ9BXX3 1397 aa20.99■□□□□ 0.95
ATP2A3-209ENST00000571245 FBXO31Q5XUX0 539 aaPredicted RBP20.98■□□□□ 0.95
ATP2A3-209ENST00000571245 DNMT1P26358 1616 aaKnown RBP20.96■□□□□ 0.95
ATP2A3-209ENST00000571245 EIF2AK4Q9P2K8 1649 aaKnown RBP20.95■□□□□ 0.94
ATP2A3-209ENST00000571245 TNRQ92752 1358 aa20.95■□□□□ 0.94
ATP2A3-209ENST00000571245 STRCQ7RTU9 1775 aa20.95■□□□□ 0.94
ATP2A3-209ENST00000571245 ERBINQ96RT1 1412 aa20.95■□□□□ 0.94
ATP2A3-209ENST00000571245 PZPP20742 1482 aa20.94■□□□□ 0.94
ATP2A3-209ENST00000571245 MYO3AQ8NEV4 1616 aa20.94■□□□□ 0.94
ATP2A3-209ENST00000571245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
ATP2A3-209ENST00000571245 ZNF142P52746 1687 aaPredicted RBP20.93■□□□□ 0.94
ATP2A3-209ENST00000571245 RNF17Q9BXT8 1623 aaKnown RBP20.93■□□□□ 0.94
ATP2A3-209ENST00000571245 KANK1Q14678 1352 aa20.91■□□□□ 0.94
ATP2A3-209ENST00000571245 NCOA1Q15788 1441 aa20.91■□□□□ 0.94
ATP2A3-209ENST00000571245 ZC3H13Q5T200 1668 aaKnown RBP20.91■□□□□ 0.94
ATP2A3-209ENST00000571245 CAMSAP1Q5T5Y3 1602 aa20.91■□□□□ 0.94
ATP2A3-209ENST00000571245 CEP170BQ9Y4F5 1589 aaPredicted RBP20.9■□□□□ 0.94
ATP2A3-209ENST00000571245 ABCC3O15438 1527 aa20.9■□□□□ 0.94
ATP2A3-209ENST00000571245 PTPRTO14522 1441 aa20.89■□□□□ 0.94
ATP2A3-209ENST00000571245 NCKAP5LQ9HCH0 1330 aa20.89■□□□□ 0.93
ATP2A3-209ENST00000571245 PKD2Q13563 968 aa20.89■□□□□ 0.93
ATP2A3-209ENST00000571245 FBXO41Q8TF61 875 aa20.89■□□□□ 0.93
ATP2A3-209ENST00000571245 A2ML1A8K2U0 1454 aa20.88■□□□□ 0.93
ATP2A3-209ENST00000571245 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
ATP2A3-209ENST00000571245 THEMISQ8N1K5 641 aaPredicted RBP20.86■□□□□ 0.93
ATP2A3-209ENST00000571245 ITGAEP38570 1179 aa20.85■□□□□ 0.93
ATP2A3-209ENST00000571245 ADGRL2O95490 1459 aa20.84■□□□□ 0.93
ATP2A3-209ENST00000571245 PLA2R1Q13018 1463 aa20.84■□□□□ 0.93
ATP2A3-209ENST00000571245 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
ATP2A3-209ENST00000571245 CEP152O94986 1710 aa20.84■□□□□ 0.93
ATP2A3-209ENST00000571245 MROH1Q8NDA8 1641 aa20.83■□□□□ 0.93
ATP2A3-209ENST00000571245 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
ATP2A3-209ENST00000571245 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
ATP2A3-209ENST00000571245 ANKLE2Q86XL3 938 aa20.8■□□□□ 0.92
ATP2A3-209ENST00000571245 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
ATP2A3-209ENST00000571245 ARHGAP31Q2M1Z3 1444 aa20.78■□□□□ 0.92
ATP2A3-209ENST00000571245 CFAP65Q6ZU64 1925 aaKnown RBP20.78■□□□□ 0.92
ATP2A3-209ENST00000571245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.78■□□□□ 0.92
ATP2A3-209ENST00000571245 UGGT1Q9NYU2 1555 aa20.77■□□□□ 0.92
ATP2A3-209ENST00000571245 POLR1AO95602 1720 aaPredicted RBP20.77■□□□□ 0.92
ATP2A3-209ENST00000571245 SPATA31D1Q6ZQQ2 1576 aa20.76■□□□□ 0.91
ATP2A3-209ENST00000571245 ROCK1Q13464 1354 aa20.76■□□□□ 0.91
ATP2A3-209ENST00000571245 DEPDC5O75140 1603 aa20.76■□□□□ 0.91
ATP2A3-209ENST00000571245 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
ATP2A3-209ENST00000571245 RRBP1Q9P2E9 1410 aaKnown RBP20.73■□□□□ 0.91
ATP2A3-209ENST00000571245 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
ATP2A3-209ENST00000571245 ZNF335Q9H4Z2 1342 aaPredicted RBP20.71■□□□□ 0.91
ATP2A3-209ENST00000571245 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
ATP2A3-209ENST00000571245 EID1Q9Y6B2 187 aa20.67■□□□□ 0.9
ATP2A3-209ENST00000571245 LTBP4Q8N2S1 1624 aa20.66■□□□□ 0.9
ATP2A3-209ENST00000571245 EFCAB6Q5THR3 1501 aa20.65■□□□□ 0.9
ATP2A3-209ENST00000571245 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
ATP2A3-209ENST00000571245 IDI1Q13907 227 aa20.65■□□□□ 0.9
ATP2A3-209ENST00000571245 TXNDC2Q86VQ3 553 aa20.65■□□□□ 0.9
ATP2A3-209ENST00000571245 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
ATP2A3-209ENST00000571245 NUP155O75694 1391 aa20.63■□□□□ 0.89
ATP2A3-209ENST00000571245 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
ATP2A3-209ENST00000571245 NEURL4Q96JN8 1562 aa20.62■□□□□ 0.89
ATP2A3-209ENST00000571245 MED14O60244 1454 aa20.62■□□□□ 0.89
ATP2A3-209ENST00000571245 UBR1Q8IWV7 1749 aa20.61■□□□□ 0.89
ATP2A3-209ENST00000571245 NOS1P29475 1434 aa20.61■□□□□ 0.89
ATP2A3-209ENST00000571245 IQSEC2Q5JU85 1478 aa20.6■□□□□ 0.89
ATP2A3-209ENST00000571245 SCAF11Q99590 1463 aaKnown RBP20.59■□□□□ 0.89
ATP2A3-209ENST00000571245 UNC13BO14795 1591 aa20.59■□□□□ 0.89
ATP2A3-209ENST00000571245 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
ATP2A3-209ENST00000571245 LTKP29376 864 aa20.58■□□□□ 0.89
ATP2A3-209ENST00000571245 TET3O43151 1660 aa20.57■□□□□ 0.88
ATP2A3-209ENST00000571245 IQGAP1P46940 1657 aa20.57■□□□□ 0.88
ATP2A3-209ENST00000571245 PIK3C2BO00750 1634 aa20.56■□□□□ 0.88
ATP2A3-209ENST00000571245 GCC2Q8IWJ2 1684 aa20.56■□□□□ 0.88
ATP2A3-209ENST00000571245 SLIT1O75093 1534 aa20.56■□□□□ 0.88
ATP2A3-209ENST00000571245 SYNMO15061 1565 aa20.55■□□□□ 0.88
ATP2A3-209ENST00000571245 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
ATP2A3-209ENST00000571245 UBAP1LF5GYI3 381 aa20.55■□□□□ 0.88
ATP2A3-209ENST00000571245 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
ATP2A3-209ENST00000571245 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
ATP2A3-209ENST00000571245 HDGFP51858 240 aaKnown RBP20.54■□□□□ 0.88
ATP2A3-209ENST00000571245 BCANQ96GW7 911 aa20.54■□□□□ 0.88
ATP2A3-209ENST00000571245 CPS1P31327 1500 aa20.53■□□□□ 0.88
ATP2A3-209ENST00000571245 IQGAP3Q86VI3 1631 aa20.52■□□□□ 0.88
ATP2A3-209ENST00000571245 ADGRB3O60242 1522 aa20.5■□□□□ 0.87
ATP2A3-209ENST00000571245 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
ATP2A3-209ENST00000571245 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
ATP2A3-209ENST00000571245 NAIPQ13075 1403 aa20.5■□□□□ 0.87
ATP2A3-209ENST00000571245 TOM1O60784 492 aa20.47■□□□□ 0.87
ATP2A3-209ENST00000571245 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
ATP2A3-209ENST00000571245 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
ATP2A3-209ENST00000571245 E9PCH4 1651 aa20.46■□□□□ 0.87
ATP2A3-209ENST00000571245 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATP2A3-209ENST00000571245 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
ATP2A3-209ENST00000571245 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms