RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
ATP2A3-209ENST00000571245 CCDC180Q9P1Z9 1646 aa29.7■■■□□ 2.34
ATP2A3-209ENST00000571245 ABCC9O60706 1549 aa29.37■■■□□ 2.29
ATP2A3-209ENST00000571245 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
ATP2A3-209ENST00000571245 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
ATP2A3-209ENST00000571245 NACADO15069 1562 aa27.99■■■□□ 2.07
ATP2A3-209ENST00000571245 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
ATP2A3-209ENST00000571245 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
ATP2A3-209ENST00000571245 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
ATP2A3-209ENST00000571245 DCAF1Q9Y4B6 1507 aa27.49■■□□□ 1.99
ATP2A3-209ENST00000571245 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
ATP2A3-209ENST00000571245 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
ATP2A3-209ENST00000571245 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
ATP2A3-209ENST00000571245 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
ATP2A3-209ENST00000571245 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
ATP2A3-209ENST00000571245 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
ATP2A3-209ENST00000571245 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
ATP2A3-209ENST00000571245 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
ATP2A3-209ENST00000571245 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
ATP2A3-209ENST00000571245 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
ATP2A3-209ENST00000571245 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
ATP2A3-209ENST00000571245 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
ATP2A3-209ENST00000571245 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
ATP2A3-209ENST00000571245 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
ATP2A3-209ENST00000571245 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
ATP2A3-209ENST00000571245 MROH2BQ7Z745 1585 aa25.62■■□□□ 1.69
ATP2A3-209ENST00000571245 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
ATP2A3-209ENST00000571245 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
ATP2A3-209ENST00000571245 WIZO95785 1651 aa25.32■■□□□ 1.64
ATP2A3-209ENST00000571245 NESP48681 1621 aa25.3■■□□□ 1.64
ATP2A3-209ENST00000571245 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
ATP2A3-209ENST00000571245 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
ATP2A3-209ENST00000571245 CUX2O14529 1486 aa25.15■■□□□ 1.62
ATP2A3-209ENST00000571245 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
ATP2A3-209ENST00000571245 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
ATP2A3-209ENST00000571245 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
ATP2A3-209ENST00000571245 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
ATP2A3-209ENST00000571245 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
ATP2A3-209ENST00000571245 CFTRP13569 1480 aa24.87■■□□□ 1.57
ATP2A3-209ENST00000571245 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.56
ATP2A3-209ENST00000571245 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
ATP2A3-209ENST00000571245 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
ATP2A3-209ENST00000571245 CCDC88BA6NC98 1476 aa24.8■■□□□ 1.56
ATP2A3-209ENST00000571245 DNAJC5Q9H3Z4 198 aa24.76■■□□□ 1.55
ATP2A3-209ENST00000571245 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
ATP2A3-209ENST00000571245 WDR62O43379 1518 aa24.71■■□□□ 1.55
ATP2A3-209ENST00000571245 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
ATP2A3-209ENST00000571245 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
ATP2A3-209ENST00000571245 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
ATP2A3-209ENST00000571245 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
ATP2A3-209ENST00000571245 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
ATP2A3-209ENST00000571245 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
ATP2A3-209ENST00000571245 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
ATP2A3-209ENST00000571245 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
ATP2A3-209ENST00000571245 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
ATP2A3-209ENST00000571245 SOGA1O94964 1423 aa24.1■■□□□ 1.45
ATP2A3-209ENST00000571245 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.442e-6■■■■□ 23.2
ATP2A3-209ENST00000571245 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
ATP2A3-209ENST00000571245 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
ATP2A3-209ENST00000571245 CUX1P39880 1505 aa24.05■■□□□ 1.44
ATP2A3-209ENST00000571245 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
ATP2A3-209ENST00000571245 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
ATP2A3-209ENST00000571245 TDRD9Q8NDG6 1382 aaKnown RBP24.01■■□□□ 1.43
ATP2A3-209ENST00000571245 FBLN2P98095 1184 aa23.95■■□□□ 1.42
ATP2A3-209ENST00000571245 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
ATP2A3-209ENST00000571245 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
ATP2A3-209ENST00000571245 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
ATP2A3-209ENST00000571245 CHD1O14646 1710 aa23.87■■□□□ 1.41
ATP2A3-209ENST00000571245 GRIN2BQ13224 1484 aa23.82■■□□□ 1.4
ATP2A3-209ENST00000571245 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
ATP2A3-209ENST00000571245 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
ATP2A3-209ENST00000571245 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
ATP2A3-209ENST00000571245 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
ATP2A3-209ENST00000571245 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
ATP2A3-209ENST00000571245 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
ATP2A3-209ENST00000571245 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
ATP2A3-209ENST00000571245 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
ATP2A3-209ENST00000571245 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
ATP2A3-209ENST00000571245 SYNJ2O15056 1496 aa23.69■■□□□ 1.38
ATP2A3-209ENST00000571245 RIMBP3CA6NJZ7 1639 aa23.68■■□□□ 1.38
ATP2A3-209ENST00000571245 RIMBP3BA6NNM3 1639 aa23.68■■□□□ 1.38
ATP2A3-209ENST00000571245 RIMBP3Q9UFD9 1639 aa23.68■■□□□ 1.38
ATP2A3-209ENST00000571245 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
ATP2A3-209ENST00000571245 ARHGEF11O15085 1522 aa23.66■■□□□ 1.38
ATP2A3-209ENST00000571245 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
ATP2A3-209ENST00000571245 CLASP1Q7Z460 1538 aa23.52■■□□□ 1.36
ATP2A3-209ENST00000571245 FHAD1B1AJZ9 1412 aa23.51■■□□□ 1.35
ATP2A3-209ENST00000571245 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
ATP2A3-209ENST00000571245 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
ATP2A3-209ENST00000571245 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
ATP2A3-209ENST00000571245 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
ATP2A3-209ENST00000571245 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
ATP2A3-209ENST00000571245 NUP160Q12769 1436 aa23.38■■□□□ 1.33
ATP2A3-209ENST00000571245 IGF1RP08069 1367 aa23.34■■□□□ 1.33
ATP2A3-209ENST00000571245 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
ATP2A3-209ENST00000571245 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
ATP2A3-209ENST00000571245 JPH4Q96JJ6 628 aa23.24■■□□□ 1.31
ATP2A3-209ENST00000571245 CARMIL1Q5VZK9 1371 aa23.22■■□□□ 1.31
ATP2A3-209ENST00000571245 CUL7Q14999 1698 aa23.22■■□□□ 1.31
ATP2A3-209ENST00000571245 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms