RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
CTDNEP1-205ENST00000570828 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
CTDNEP1-205ENST00000570828 PREX1Q8TCU6 1659 aa19.48■□□□□ 0.71
CTDNEP1-205ENST00000570828 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
CTDNEP1-205ENST00000570828 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
CTDNEP1-205ENST00000570828 ILDR1Q86SU0 546 aaPredicted RBP19.46■□□□□ 0.71
CTDNEP1-205ENST00000570828 C3P01024 1663 aa19.45■□□□□ 0.7
CTDNEP1-205ENST00000570828 ADGBQ8N7X0 1667 aa19.45■□□□□ 0.7
CTDNEP1-205ENST00000570828 GGT6Q6P531 493 aa19.43■□□□□ 0.7
CTDNEP1-205ENST00000570828 ARHGEF5Q12774 1597 aa19.43■□□□□ 0.7
CTDNEP1-205ENST00000570828 MYOM3Q5VTT5 1437 aa19.42■□□□□ 0.7
CTDNEP1-205ENST00000570828 DHX29Q7Z478 1369 aaKnown RBP19.42■□□□□ 0.7
CTDNEP1-205ENST00000570828 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
CTDNEP1-205ENST00000570828 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
CTDNEP1-205ENST00000570828 ZMYM3Q14202 1370 aa19.41■□□□□ 0.7
CTDNEP1-205ENST00000570828 MIA2Q96PC5 1412 aa19.41■□□□□ 0.7
CTDNEP1-205ENST00000570828 MROH2AA6NES4 1674 aa19.4■□□□□ 0.7
CTDNEP1-205ENST00000570828 NPATQ14207 1427 aa19.4■□□□□ 0.7
CTDNEP1-205ENST00000570828 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
CTDNEP1-205ENST00000570828 CLTCQ00610 1675 aaKnown RBP19.36■□□□□ 0.69
CTDNEP1-205ENST00000570828 KIF3BO15066 747 aa19.36■□□□□ 0.69
CTDNEP1-205ENST00000570828 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
CTDNEP1-205ENST00000570828 MAST1Q9Y2H9 1570 aa19.32■□□□□ 0.68
CTDNEP1-205ENST00000570828 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
CTDNEP1-205ENST00000570828 FAM135AQ9P2D6 1515 aa19.31■□□□□ 0.68
CTDNEP1-205ENST00000570828 FBXO41Q8TF61 875 aa19.31■□□□□ 0.68
CTDNEP1-205ENST00000570828 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
CTDNEP1-205ENST00000570828 WASHC2CQ9Y4E1 1318 aa19.27■□□□□ 0.68
CTDNEP1-205ENST00000570828 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
CTDNEP1-205ENST00000570828 FGD6Q6ZV73 1430 aa19.27■□□□□ 0.68
CTDNEP1-205ENST00000570828 MYO3AQ8NEV4 1616 aa19.27■□□□□ 0.68
CTDNEP1-205ENST00000570828 PTPN23Q9H3S7 1636 aa19.26■□□□□ 0.67
CTDNEP1-205ENST00000570828 SHANK2Q9UPX8 1470 aa19.26■□□□□ 0.67
CTDNEP1-205ENST00000570828 STRCQ7RTU9 1775 aa19.26■□□□□ 0.67
CTDNEP1-205ENST00000570828 PTPRTO14522 1441 aa19.25■□□□□ 0.67
CTDNEP1-205ENST00000570828 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
CTDNEP1-205ENST00000570828 PZPP20742 1482 aa19.24■□□□□ 0.67
CTDNEP1-205ENST00000570828 CAMSAP1Q5T5Y3 1602 aa19.24■□□□□ 0.67
CTDNEP1-205ENST00000570828 ABCC5O15440 1437 aa19.24■□□□□ 0.67
CTDNEP1-205ENST00000570828 ZNF142P52746 1687 aaPredicted RBP19.23■□□□□ 0.67
CTDNEP1-205ENST00000570828 TCOF1Q13428 1488 aaKnown RBP19.22■□□□□ 0.67
CTDNEP1-205ENST00000570828 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
CTDNEP1-205ENST00000570828 KIF15Q9NS87 1388 aa19.22■□□□□ 0.67
CTDNEP1-205ENST00000570828 DUOX2Q9NRD8 1548 aa19.22■□□□□ 0.67
CTDNEP1-205ENST00000570828 CERKQ8TCT0 537 aa19.22■□□□□ 0.67
CTDNEP1-205ENST00000570828 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
CTDNEP1-205ENST00000570828 TNRQ92752 1358 aa19.21■□□□□ 0.67
CTDNEP1-205ENST00000570828 DAPK1P53355 1430 aa19.21■□□□□ 0.67
CTDNEP1-205ENST00000570828 FBXO31Q5XUX0 539 aaPredicted RBP19.2■□□□□ 0.66
CTDNEP1-205ENST00000570828 A2ML1A8K2U0 1454 aa19.2■□□□□ 0.66
CTDNEP1-205ENST00000570828 PLA2R1Q13018 1463 aa19.2■□□□□ 0.66
CTDNEP1-205ENST00000570828 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
CTDNEP1-205ENST00000570828 CROCC2H7BZ55 1655 aa19.19■□□□□ 0.66
CTDNEP1-205ENST00000570828 ABCC3O15438 1527 aa19.19■□□□□ 0.66
CTDNEP1-205ENST00000570828 ERBINQ96RT1 1412 aa19.17■□□□□ 0.66
CTDNEP1-205ENST00000570828 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
CTDNEP1-205ENST00000570828 PKD2Q13563 968 aa19.16■□□□□ 0.66
CTDNEP1-205ENST00000570828 POLA2Q14181 598 aa19.16■□□□□ 0.66
CTDNEP1-205ENST00000570828 ZC3H13Q5T200 1668 aaKnown RBP19.16■□□□□ 0.66
CTDNEP1-205ENST00000570828 NCKAP5LQ9HCH0 1330 aa19.16■□□□□ 0.66
CTDNEP1-205ENST00000570828 MYCNP04198 464 aaPredicted RBP19.15■□□□□ 0.66
CTDNEP1-205ENST00000570828 ANKRD30AQ9BXX3 1397 aa19.15■□□□□ 0.66
CTDNEP1-205ENST00000570828 MROH1Q8NDA8 1641 aa19.14■□□□□ 0.66
CTDNEP1-205ENST00000570828 CHRDL2Q6WN34 429 aa19.14■□□□□ 0.65
CTDNEP1-205ENST00000570828 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
CTDNEP1-205ENST00000570828 CHIC2Q9UKJ5 165 aa19.13■□□□□ 0.65
CTDNEP1-205ENST00000570828 NLRP1Q9C000 1473 aa19.13■□□□□ 0.65
CTDNEP1-205ENST00000570828 PRDM15P57071 1507 aaPredicted RBP19.12■□□□□ 0.65
CTDNEP1-205ENST00000570828 ERVK-7P63135 1459 aa19.09■□□□□ 0.65
CTDNEP1-205ENST00000570828 SPATA31D1Q6ZQQ2 1576 aa19.09■□□□□ 0.65
CTDNEP1-205ENST00000570828 KANK1Q14678 1352 aa19.08■□□□□ 0.65
CTDNEP1-205ENST00000570828 ADGRL2O95490 1459 aa19.08■□□□□ 0.64
CTDNEP1-205ENST00000570828 LTBP4Q8N2S1 1624 aa19.07■□□□□ 0.64
CTDNEP1-205ENST00000570828 UGGT1Q9NYU2 1555 aa19.07■□□□□ 0.64
CTDNEP1-205ENST00000570828 THEMISQ8N1K5 641 aaPredicted RBP19.07■□□□□ 0.64
CTDNEP1-205ENST00000570828 CEP152O94986 1710 aa19.06■□□□□ 0.64
CTDNEP1-205ENST00000570828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
CTDNEP1-205ENST00000570828 ZNF335Q9H4Z2 1342 aaPredicted RBP19.05■□□□□ 0.64
CTDNEP1-205ENST00000570828 DEPDC5O75140 1603 aa19.05■□□□□ 0.64
CTDNEP1-205ENST00000570828 ARHGAP31Q2M1Z3 1444 aa19.05■□□□□ 0.64
CTDNEP1-205ENST00000570828 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
CTDNEP1-205ENST00000570828 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
CTDNEP1-205ENST00000570828 NEURL4Q96JN8 1562 aa19.01■□□□□ 0.63
CTDNEP1-205ENST00000570828 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
CTDNEP1-205ENST00000570828 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
CTDNEP1-205ENST00000570828 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
CTDNEP1-205ENST00000570828 NPHP4O75161 1426 aaPredicted RBP18.98■□□□□ 0.63
CTDNEP1-205ENST00000570828 VWDEQ8N2E2 1590 aa18.98■□□□□ 0.63
CTDNEP1-205ENST00000570828 PPARGC1BQ86YN6 1023 aaKnown RBP18.96■□□□□ 0.63
CTDNEP1-205ENST00000570828 MED14O60244 1454 aa18.96■□□□□ 0.63
CTDNEP1-205ENST00000570828 EFCAB6Q5THR3 1501 aa18.95■□□□□ 0.62
CTDNEP1-205ENST00000570828 ROCK1Q13464 1354 aa18.93■□□□□ 0.62
CTDNEP1-205ENST00000570828 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
CTDNEP1-205ENST00000570828 SCAF11Q99590 1463 aaKnown RBP18.91■□□□□ 0.62
CTDNEP1-205ENST00000570828 CPS1P31327 1500 aa18.91■□□□□ 0.62
CTDNEP1-205ENST00000570828 ITGAEP38570 1179 aa18.91■□□□□ 0.62
CTDNEP1-205ENST00000570828 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
CTDNEP1-205ENST00000570828 IQGAP1P46940 1657 aa18.9■□□□□ 0.62
CTDNEP1-205ENST00000570828 UBAP1LF5GYI3 381 aa18.89■□□□□ 0.61
CTDNEP1-205ENST00000570828 NOS1P29475 1434 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms