RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 FAM135AQ9P2D6 1515 aa34.99■■■■□ 3.19
SLC12A4-205ENST00000570616 MROH2AA6NES4 1674 aa34.98■■■■□ 3.19
SLC12A4-205ENST00000570616 CEBPAP49715 358 aaPredicted RBP34.98■■■■□ 3.19
SLC12A4-205ENST00000570616 RNF17Q9BXT8 1623 aaKnown RBP34.96■■■■□ 3.19
SLC12A4-205ENST00000570616 PTPRKQ15262 1439 aa34.95■■■■□ 3.19
SLC12A4-205ENST00000570616 ZMYM3Q14202 1370 aa34.94■■■■□ 3.18
SLC12A4-205ENST00000570616 C3P01024 1663 aa34.94■■■■□ 3.18
SLC12A4-205ENST00000570616 CLTCQ00610 1675 aaKnown RBP34.93■■■■□ 3.18
SLC12A4-205ENST00000570616 KDM5DQ9BY66 1539 aa34.93■■■■□ 3.18
SLC12A4-205ENST00000570616 LMTK3Q96Q04 1460 aa34.89■■■■□ 3.18
SLC12A4-205ENST00000570616 ROCK1Q13464 1354 aa34.88■■■■□ 3.17
SLC12A4-205ENST00000570616 MROH1Q8NDA8 1641 aa34.87■■■■□ 3.17
SLC12A4-205ENST00000570616 NPATQ14207 1427 aa34.86■■■■□ 3.17
SLC12A4-205ENST00000570616 WASHC2CQ9Y4E1 1318 aa34.85■■■■□ 3.17
SLC12A4-205ENST00000570616 PRDM15P57071 1507 aaPredicted RBP34.82■■■■□ 3.16
SLC12A4-205ENST00000570616 ITGAEP38570 1179 aa34.81■■■■□ 3.16
SLC12A4-205ENST00000570616 ABCC3O15438 1527 aa34.81■■■■□ 3.16
SLC12A4-205ENST00000570616 ANKRD50Q9ULJ7 1429 aa34.81■■■■□ 3.16
SLC12A4-205ENST00000570616 ZC3H13Q5T200 1668 aaKnown RBP34.79■■■■□ 3.16
SLC12A4-205ENST00000570616 DEPDC5O75140 1603 aa34.79■■■■□ 3.16
SLC12A4-205ENST00000570616 PREX1Q8TCU6 1659 aa34.79■■■■□ 3.16
SLC12A4-205ENST00000570616 UHRF1BP1Q6BDS2 1440 aa34.78■■■■□ 3.16
SLC12A4-205ENST00000570616 PZPP20742 1482 aa34.76■■■■□ 3.15
SLC12A4-205ENST00000570616 SETD1BQ9UPS6 1966 aaKnown RBP34.72■■■■□ 3.15
SLC12A4-205ENST00000570616 KANK1Q14678 1352 aa34.71■■■■□ 3.15
SLC12A4-205ENST00000570616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.68■■■■□ 3.141e-9■■□□□ 11.5
SLC12A4-205ENST00000570616 VWDEQ8N2E2 1590 aa34.67■■■■□ 3.14
SLC12A4-205ENST00000570616 HSPA2P54652 639 aa34.66■■■■□ 3.14
SLC12A4-205ENST00000570616 CEP152O94986 1710 aa34.65■■■■□ 3.14
SLC12A4-205ENST00000570616 CAMSAP1Q5T5Y3 1602 aa34.64■■■■□ 3.14
SLC12A4-205ENST00000570616 LMTK2Q8IWU2 1503 aa34.64■■■■□ 3.14
SLC12A4-205ENST00000570616 FBXO31Q5XUX0 539 aaPredicted RBP34.63■■■■□ 3.13
SLC12A4-205ENST00000570616 ARHGAP31Q2M1Z3 1444 aa34.62■■■■□ 3.13
SLC12A4-205ENST00000570616 TNRQ92752 1358 aa34.62■■■■□ 3.13
SLC12A4-205ENST00000570616 MYO3AQ8NEV4 1616 aa34.61■■■■□ 3.13
SLC12A4-205ENST00000570616 UNC13BO14795 1591 aa34.59■■■■□ 3.13
SLC12A4-205ENST00000570616 ERVK-7P63135 1459 aa34.57■■■■□ 3.12
SLC12A4-205ENST00000570616 SPATA31D1Q6ZQQ2 1576 aa34.57■■■■□ 3.12
SLC12A4-205ENST00000570616 ZNF142P52746 1687 aaPredicted RBP34.55■■■■□ 3.12
SLC12A4-205ENST00000570616 NAIPQ13075 1403 aa34.55■■■■□ 3.12
SLC12A4-205ENST00000570616 CEP170BQ9Y4F5 1589 aaPredicted RBP34.54■■■■□ 3.12
SLC12A4-205ENST00000570616 HFM1A2PYH4 1435 aa34.53■■■■□ 3.12
SLC12A4-205ENST00000570616 A2ML1A8K2U0 1454 aa34.52■■■■□ 3.12
SLC12A4-205ENST00000570616 EFCAB6Q5THR3 1501 aa34.51■■■■□ 3.12
SLC12A4-205ENST00000570616 NLRP1Q9C000 1473 aa34.5■■■■□ 3.11
SLC12A4-205ENST00000570616 GCC2Q8IWJ2 1684 aa34.49■■■■□ 3.11
SLC12A4-205ENST00000570616 NUP155O75694 1391 aa34.43■■■■□ 3.1
SLC12A4-205ENST00000570616 RPRD2Q5VT52 1461 aaKnown RBP34.43■■■■□ 3.1
SLC12A4-205ENST00000570616 IQGAP3Q86VI3 1631 aa34.43■■■■□ 3.1
SLC12A4-205ENST00000570616 TET3O43151 1660 aa34.43■■■■□ 3.1
SLC12A4-205ENST00000570616 PLA2R1Q13018 1463 aa34.4■■■■□ 3.1
SLC12A4-205ENST00000570616 NOS1P29475 1434 aa34.38■■■■□ 3.09
SLC12A4-205ENST00000570616 STRCQ7RTU9 1775 aa34.35■■■■□ 3.09
SLC12A4-205ENST00000570616 UGGT1Q9NYU2 1555 aa34.35■■■■□ 3.09
SLC12A4-205ENST00000570616 DMRT2Q9Y5R5 561 aa34.31■■■■□ 3.08
SLC12A4-205ENST00000570616 SYNMO15061 1565 aa34.31■■■■□ 3.08
SLC12A4-205ENST00000570616 THEMISQ8N1K5 641 aaPredicted RBP34.29■■■■□ 3.08
SLC12A4-205ENST00000570616 CFAP65Q6ZU64 1925 aaKnown RBP34.28■■■■□ 3.08
SLC12A4-205ENST00000570616 PKD2Q13563 968 aa34.27■■■■□ 3.08
SLC12A4-205ENST00000570616 PTPRTO14522 1441 aa34.27■■■■□ 3.08
SLC12A4-205ENST00000570616 E9PCH4 1651 aa34.26■■■■□ 3.08
SLC12A4-205ENST00000570616 NCKAP5LQ9HCH0 1330 aa34.23■■■■□ 3.07
SLC12A4-205ENST00000570616 SLC52A1Q9NWF4 448 aa34.22■■■■□ 3.07
SLC12A4-205ENST00000570616 IDI1Q13907 227 aa34.21■■■■□ 3.07
SLC12A4-205ENST00000570616 UBR1Q8IWV7 1749 aa34.21■■■■□ 3.07
SLC12A4-205ENST00000570616 PIK3C2BO00750 1634 aa34.2■■■■□ 3.07
SLC12A4-205ENST00000570616 TRIM52Q96A61 297 aa34.19■■■■□ 3.06
SLC12A4-205ENST00000570616 SETD5Q9C0A6 1442 aa34.17■■■■□ 3.06
SLC12A4-205ENST00000570616 ANKLE2Q86XL3 938 aa34.16■■■■□ 3.06
SLC12A4-205ENST00000570616 KDM5AP29375 1690 aaKnown RBP34.15■■■■□ 3.06
SLC12A4-205ENST00000570616 ADGRB3O60242 1522 aa34.14■■■■□ 3.06
SLC12A4-205ENST00000570616 STAG3Q9UJ98 1225 aa34.13■■■■□ 3.05
SLC12A4-205ENST00000570616 NEURL4Q96JN8 1562 aa34.13■■■■□ 3.05
SLC12A4-205ENST00000570616 SLIT1O75093 1534 aa34.13■■■■□ 3.05
SLC12A4-205ENST00000570616 ARHGAP23Q9P227 1491 aa34.13■■■■□ 3.05
SLC12A4-205ENST00000570616 ACIN1Q9UKV3 1341 aaKnown RBP34.12■■■■□ 3.05
SLC12A4-205ENST00000570616 POLR1AO95602 1720 aaPredicted RBP34.12■■■■□ 3.05
SLC12A4-205ENST00000570616 TMEM2Q9UHN6 1383 aa34.09■■■■□ 3.05
SLC12A4-205ENST00000570616 MED14O60244 1454 aa34.08■■■■□ 3.05
SLC12A4-205ENST00000570616 SLC4A1APQ9BWU0 796 aaKnown RBP34.08■■■■□ 3.05
SLC12A4-205ENST00000570616 RAB3GAP2Q9H2M9 1393 aa34.06■■■■□ 3.04
SLC12A4-205ENST00000570616 SCAF11Q99590 1463 aaKnown RBP34.06■■■■□ 3.04
SLC12A4-205ENST00000570616 NPHP4O75161 1426 aaPredicted RBP34.04■■■■□ 3.04
SLC12A4-205ENST00000570616 SPHKAPQ2M3C7 1700 aa34.04■■■■□ 3.04
SLC12A4-205ENST00000570616 TRPM2O94759 1503 aa34.02■■■■□ 3.04
SLC12A4-205ENST00000570616 TMEM131LA2VDJ0 1609 aa34.01■■■■□ 3.03
SLC12A4-205ENST00000570616 TXNDC2Q86VQ3 553 aa34■■■■□ 3.03
SLC12A4-205ENST00000570616 EID1Q9Y6B2 187 aa34■■■■□ 3.03
SLC12A4-205ENST00000570616 LTKP29376 864 aa33.99■■■■□ 3.03
SLC12A4-205ENST00000570616 MPHOSPH9Q99550 1183 aa33.96■■■■□ 3.03
SLC12A4-205ENST00000570616 IQGAP1P46940 1657 aa33.95■■■■□ 3.03
SLC12A4-205ENST00000570616 CHGAP10645 457 aaKnown RBP33.93■■■■□ 3.02
SLC12A4-205ENST00000570616 ZFYVE9O95405 1425 aa33.93■■■■□ 3.02
SLC12A4-205ENST00000570616 HRCP23327 699 aa33.92■■■■□ 3.02
SLC12A4-205ENST00000570616 CLTCL1P53675 1640 aa33.91■■■■□ 3.02
SLC12A4-205ENST00000570616 LTBP4Q8N2S1 1624 aa33.91■■■■□ 3.02
SLC12A4-205ENST00000570616 ZNF335Q9H4Z2 1342 aaPredicted RBP33.9■■■■□ 3.02
SLC12A4-205ENST00000570616 RIMS2Q9UQ26 1411 aa33.89■■■■□ 3.02
SLC12A4-205ENST00000570616 MYO5BQ9ULV0 1848 aa33.86■■■■□ 3.01
SLC12A4-205ENST00000570616 HDGFP51858 240 aaKnown RBP33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms