RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 ABCC1P33527 1531 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
CNOT1-214ENST00000568917 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
CNOT1-214ENST00000568917 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
CNOT1-214ENST00000568917 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
CNOT1-214ENST00000568917 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
CNOT1-214ENST00000568917 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
CNOT1-214ENST00000568917 CHIC2Q9UKJ5 165 aa13.71□□□□□ -0.21
CNOT1-214ENST00000568917 PLXNC1O60486 1568 aa13.71□□□□□ -0.21
CNOT1-214ENST00000568917 CFAP74Q9C0B2 1584 aa13.7□□□□□ -0.22
CNOT1-214ENST00000568917 KDM6BO15054 1643 aa13.68□□□□□ -0.22
CNOT1-214ENST00000568917 ANKRD50Q9ULJ7 1429 aa13.67□□□□□ -0.22
CNOT1-214ENST00000568917 FANCAO15360 1455 aa13.67□□□□□ -0.22
CNOT1-214ENST00000568917 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
CNOT1-214ENST00000568917 HNRNPMP52272 730 aaKnown RBP eCLIP13.65□□□□□ -0.22
CNOT1-214ENST00000568917 KDM5DQ9BY66 1539 aa13.65□□□□□ -0.22
CNOT1-214ENST00000568917 GLI2P10070 1586 aa13.65□□□□□ -0.22
CNOT1-214ENST00000568917 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
CNOT1-214ENST00000568917 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
CNOT1-214ENST00000568917 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
CNOT1-214ENST00000568917 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
CNOT1-214ENST00000568917 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
CNOT1-214ENST00000568917 CD109Q6YHK3 1445 aa13.61□□□□□ -0.23
CNOT1-214ENST00000568917 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
CNOT1-214ENST00000568917 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-214ENST00000568917 NEO1Q92859 1461 aa13.61□□□□□ -0.23
CNOT1-214ENST00000568917 MPHOSPH9Q99550 1183 aa13.61□□□□□ -0.23
CNOT1-214ENST00000568917 ADGRL1O94910 1474 aa13.6□□□□□ -0.23
CNOT1-214ENST00000568917 MAP3K4Q9Y6R4 1608 aa13.6□□□□□ -0.23
CNOT1-214ENST00000568917 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
CNOT1-214ENST00000568917 UNC13BO14795 1591 aa13.59□□□□□ -0.23
CNOT1-214ENST00000568917 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
CNOT1-214ENST00000568917 ZFYVE16Q7Z3T8 1539 aa13.59□□□□□ -0.23
CNOT1-214ENST00000568917 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
CNOT1-214ENST00000568917 TRAPPC8Q9Y2L5 1435 aa13.59□□□□□ -0.23
CNOT1-214ENST00000568917 PZPP20742 1482 aa13.58□□□□□ -0.24
CNOT1-214ENST00000568917 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
CNOT1-214ENST00000568917 ZNF518AQ6AHZ1 1483 aa13.57□□□□□ -0.24
CNOT1-214ENST00000568917 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
CNOT1-214ENST00000568917 MAGI2Q86UL8 1455 aa13.56□□□□□ -0.24
CNOT1-214ENST00000568917 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
CNOT1-214ENST00000568917 KDM5CP41229 1560 aa13.55□□□□□ -0.24
CNOT1-214ENST00000568917 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
CNOT1-214ENST00000568917 ANKRD30BQ9BXX2 1392 aa13.54□□□□□ -0.24
CNOT1-214ENST00000568917 EIF2AK4Q9P2K8 1649 aaKnown RBP13.54□□□□□ -0.24
CNOT1-214ENST00000568917 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
CNOT1-214ENST00000568917 IQGAP3Q86VI3 1631 aa13.53□□□□□ -0.24
CNOT1-214ENST00000568917 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
CNOT1-214ENST00000568917 POGZQ7Z3K3 1410 aa13.53□□□□□ -0.24
CNOT1-214ENST00000568917 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.25
CNOT1-214ENST00000568917 NUP155O75694 1391 aa13.52□□□□□ -0.25
CNOT1-214ENST00000568917 RPRD2Q5VT52 1461 aaKnown RBP13.52□□□□□ -0.25
CNOT1-214ENST00000568917 MLH3Q9UHC1 1453 aa13.52□□□□□ -0.25
CNOT1-214ENST00000568917 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
CNOT1-214ENST00000568917 FAM135AQ9P2D6 1515 aa13.51□□□□□ -0.25
CNOT1-214ENST00000568917 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
CNOT1-214ENST00000568917 KIDINS220Q9ULH0 1771 aa13.5□□□□□ -0.25
CNOT1-214ENST00000568917 HECW2Q9P2P5 1572 aa13.49□□□□□ -0.25
CNOT1-214ENST00000568917 TEX14Q8IWB6 1497 aa13.49□□□□□ -0.25
CNOT1-214ENST00000568917 NEUROD1Q13562 356 aa13.49□□□□□ -0.25
CNOT1-214ENST00000568917 AFAP1Q8N556 730 aa13.49□□□□□ -0.25
CNOT1-214ENST00000568917 PPP1R15AO75807 674 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-214ENST00000568917 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
CNOT1-214ENST00000568917 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
CNOT1-214ENST00000568917 RICTORQ6R327 1708 aa13.46□□□□□ -0.25
CNOT1-214ENST00000568917 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-214ENST00000568917 ATP10AO60312 1499 aa13.46□□□□□ -0.25
CNOT1-214ENST00000568917 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-214ENST00000568917 PKD2Q13563 968 aa13.45□□□□□ -0.26
CNOT1-214ENST00000568917 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
CNOT1-214ENST00000568917 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
CNOT1-214ENST00000568917 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-214ENST00000568917 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
CNOT1-214ENST00000568917 PPRC1Q5VV67 1664 aaKnown RBP13.43□□□□□ -0.26
CNOT1-214ENST00000568917 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
CNOT1-214ENST00000568917 KIF13AQ9H1H9 1805 aa13.43□□□□□ -0.26
CNOT1-214ENST00000568917 A2MP01023 1474 aa13.43□□□□□ -0.26
CNOT1-214ENST00000568917 FAM69CQ0P6D2 419 aa13.42□□□□□ -0.26
CNOT1-214ENST00000568917 TET3O43151 1660 aa13.42□□□□□ -0.26
CNOT1-214ENST00000568917 KANK1Q14678 1352 aa13.41□□□□□ -0.26
CNOT1-214ENST00000568917 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.27
CNOT1-214ENST00000568917 MIER1Q8N108 512 aa13.39□□□□□ -0.27
CNOT1-214ENST00000568917 ABCA6Q8N139 1617 aa13.39□□□□□ -0.27
CNOT1-214ENST00000568917 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
CNOT1-214ENST00000568917 FRMPD1Q5SYB0 1578 aa13.38□□□□□ -0.27
CNOT1-214ENST00000568917 REREQ9P2R6 1566 aa13.38□□□□□ -0.27
CNOT1-214ENST00000568917 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
CNOT1-214ENST00000568917 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
CNOT1-214ENST00000568917 CCDC144AA2RUR9 1427 aa13.36□□□□□ -0.27
CNOT1-214ENST00000568917 E9PCH4 1651 aa13.36□□□□□ -0.27
CNOT1-214ENST00000568917 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
CNOT1-214ENST00000568917 HAX1O00165 279 aa13.36□□□□□ -0.27
CNOT1-214ENST00000568917 L3MBTL2Q969R5 705 aa13.36□□□□□ -0.27
CNOT1-214ENST00000568917 TSPOAP1O95153 1857 aa13.36□□□□□ -0.27
CNOT1-214ENST00000568917 TRPM2O94759 1503 aa13.35□□□□□ -0.27
CNOT1-214ENST00000568917 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
CNOT1-214ENST00000568917 KIF3BO15066 747 aa13.35□□□□□ -0.27
CNOT1-214ENST00000568917 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-214ENST00000568917 EVX2Q03828 476 aa13.35□□□□□ -0.27
CNOT1-214ENST00000568917 PTPRTO14522 1441 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms