RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 EXOC6Q8TAG9 804 aa28.78■■■□□ 2.2
DENND4A-208ENST00000568515 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
DENND4A-208ENST00000568515 PLEKHD1A6NEE1 506 aa28.76■■■□□ 2.19
DENND4A-208ENST00000568515 TSPY4P0CV99 314 aa28.76■■■□□ 2.19
DENND4A-208ENST00000568515 TSPY10P0CW01 314 aa28.76■■■□□ 2.19
DENND4A-208ENST00000568515 PTPRGP23470 1445 aa28.75■■■□□ 2.19
DENND4A-208ENST00000568515 NLRP13Q86W25 1043 aa28.75■■■□□ 2.19
DENND4A-208ENST00000568515 ABCC10Q5T3U5 1492 aa28.74■■■□□ 2.19
DENND4A-208ENST00000568515 CARMIL2Q6F5E8 1435 aa28.74■■■□□ 2.19
DENND4A-208ENST00000568515 TCERG1O14776 1098 aaKnown RBP28.74■■■□□ 2.19
DENND4A-208ENST00000568515 PDE3BQ13370 1112 aa28.74■■■□□ 2.19
DENND4A-208ENST00000568515 CHMP7Q8WUX9 453 aaPredicted RBP28.73■■■□□ 2.19
DENND4A-208ENST00000568515 PARD3Q8TEW0 1356 aa28.72■■■□□ 2.19
DENND4A-208ENST00000568515 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
DENND4A-208ENST00000568515 RTL5Q5HYW3 569 aaPredicted RBP28.7■■■□□ 2.19
DENND4A-208ENST00000568515 MAGI1Q96QZ7 1491 aaPredicted RBP28.7■■■□□ 2.19
DENND4A-208ENST00000568515 JPH4Q96JJ6 628 aa28.68■■■□□ 2.18
DENND4A-208ENST00000568515 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
DENND4A-208ENST00000568515 HNRNPMP52272 730 aaKnown RBP eCLIP28.65■■■□□ 2.18
DENND4A-208ENST00000568515 PER1O15534 1290 aaPredicted RBP28.65■■■□□ 2.18
DENND4A-208ENST00000568515 ATP10BO94823 1461 aa28.64■■■□□ 2.18
DENND4A-208ENST00000568515 PDE4AP27815 886 aa28.64■■■□□ 2.18
DENND4A-208ENST00000568515 PRAG1Q86YV5 1406 aa28.64■■■□□ 2.17
DENND4A-208ENST00000568515 ABCA8O94911 1581 aa28.63■■■□□ 2.17
DENND4A-208ENST00000568515 TRPM1Q7Z4N2 1603 aa28.63■■■□□ 2.17
DENND4A-208ENST00000568515 NPM2Q86SE8 214 aaKnown RBP28.63■■■□□ 2.17
DENND4A-208ENST00000568515 MS4A1P11836 297 aa28.62■■■□□ 2.17
DENND4A-208ENST00000568515 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
DENND4A-208ENST00000568515 FBLN2P98095 1184 aa28.61■■■□□ 2.17
DENND4A-208ENST00000568515 CDCA7LQ96GN5 454 aa28.61■■■□□ 2.17
DENND4A-208ENST00000568515 FAM135AQ9P2D6 1515 aa28.6■■■□□ 2.17
DENND4A-208ENST00000568515 BACH2Q9BYV9 841 aa28.6■■■□□ 2.17
DENND4A-208ENST00000568515 NUP160Q12769 1436 aa28.58■■■□□ 2.17
DENND4A-208ENST00000568515 NBPF1Q3BBV0 1214 aa28.57■■■□□ 2.16
DENND4A-208ENST00000568515 WASHC2CQ9Y4E1 1318 aa28.57■■■□□ 2.16
DENND4A-208ENST00000568515 CCDC144AA2RUR9 1427 aa28.57■■■□□ 2.16
DENND4A-208ENST00000568515 INSRP06213 1382 aa28.56■■■□□ 2.16
DENND4A-208ENST00000568515 GPRASP1Q5JY77 1395 aa28.55■■■□□ 2.16
DENND4A-208ENST00000568515 COL17A1Q9UMD9 1497 aaPredicted RBP28.53■■■□□ 2.16
DENND4A-208ENST00000568515 RGL3Q3MIN7 710 aa28.53■■■□□ 2.16
DENND4A-208ENST00000568515 BLMP54132 1417 aaPredicted RBP28.52■■■□□ 2.16
DENND4A-208ENST00000568515 CCDC141Q6ZP82 1450 aa28.52■■■□□ 2.16
DENND4A-208ENST00000568515 CC2D1BQ5T0F9 858 aaKnown RBP28.52■■■□□ 2.16
DENND4A-208ENST00000568515 ZMYM4Q5VZL5 1548 aa28.51■■■□□ 2.15
DENND4A-208ENST00000568515 PLIN1O60240 522 aa28.51■■■□□ 2.15
DENND4A-208ENST00000568515 TESK2Q96S53 571 aa28.5■■■□□ 2.15
DENND4A-208ENST00000568515 DISP3Q9P2K9 1392 aa28.49■■■□□ 2.15
DENND4A-208ENST00000568515 RSPH4AQ5TD94 716 aa28.48■■■□□ 2.15
DENND4A-208ENST00000568515 PANK3Q9H999 370 aa28.48■■■□□ 2.15
DENND4A-208ENST00000568515 LAMC1P11047 1609 aa28.48■■■□□ 2.15
DENND4A-208ENST00000568515 A2MP01023 1474 aa28.48■■■□□ 2.15
DENND4A-208ENST00000568515 PLA2R1Q13018 1463 aa28.47■■■□□ 2.15
DENND4A-208ENST00000568515 PRDM15P57071 1507 aaPredicted RBP28.47■■■□□ 2.15
DENND4A-208ENST00000568515 SAMD9LQ8IVG5 1584 aa28.47■■■□□ 2.15
DENND4A-208ENST00000568515 CRBNQ96SW2 442 aa28.46■■■□□ 2.15
DENND4A-208ENST00000568515 ERBINQ96RT1 1412 aa28.44■■■□□ 2.14
DENND4A-208ENST00000568515 USP35Q9P2H5 1018 aa28.44■■■□□ 2.14
DENND4A-208ENST00000568515 LAS1LQ9Y4W2 734 aaKnown RBP28.44■■■□□ 2.14
DENND4A-208ENST00000568515 PLEKHH2Q8IVE3 1493 aa28.43■■■□□ 2.14
DENND4A-208ENST00000568515 CDC42BPBQ9Y5S2 1711 aa28.42■■■□□ 2.14
DENND4A-208ENST00000568515 NEFMP07197 916 aa28.41■■■□□ 2.14
DENND4A-208ENST00000568515 TMF1P82094 1093 aa28.4■■■□□ 2.14
DENND4A-208ENST00000568515 UNC13BO14795 1591 aa28.4■■■□□ 2.14
DENND4A-208ENST00000568515 PREX2Q70Z35 1606 aa28.4■■■□□ 2.14
DENND4A-208ENST00000568515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.38■■■□□ 2.139e-12■■□□□ 11.5
DENND4A-208ENST00000568515 PPM1GO15355 546 aaPredicted RBP28.37■■■□□ 2.13
DENND4A-208ENST00000568515 EIF2AK4Q9P2K8 1649 aaKnown RBP28.37■■■□□ 2.13
DENND4A-208ENST00000568515 SKAP1Q86WV1 359 aa28.36■■■□□ 2.13
DENND4A-208ENST00000568515 MYO5CQ9NQX4 1742 aa28.35■■■□□ 2.13
DENND4A-208ENST00000568515 DDRGK1Q96HY6 314 aa28.35■■■□□ 2.13
DENND4A-208ENST00000568515 ADAMTS8Q9UP79 889 aa28.34■■■□□ 2.13
DENND4A-208ENST00000568515 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
DENND4A-208ENST00000568515 MAST1Q9Y2H9 1570 aa28.33■■■□□ 2.13
DENND4A-208ENST00000568515 C20orf194Q5TEA3 1177 aa28.33■■■□□ 2.13
DENND4A-208ENST00000568515 SYCP2Q9BX26 1530 aa28.32■■■□□ 2.12
DENND4A-208ENST00000568515 IQGAP3Q86VI3 1631 aa28.31■■■□□ 2.12
DENND4A-208ENST00000568515 KDM2BQ8NHM5 1336 aa28.29■■■□□ 2.12
DENND4A-208ENST00000568515 ATP10AO60312 1499 aa28.27■■■□□ 2.12
DENND4A-208ENST00000568515 DUSP27Q5VZP5 1158 aa28.25■■■□□ 2.11
DENND4A-208ENST00000568515 ARHGAP5Q13017 1502 aa28.25■■■□□ 2.11
DENND4A-208ENST00000568515 CENPQQ7L2Z9 268 aaPredicted RBP28.25■■■□□ 2.11
DENND4A-208ENST00000568515 PLEKHH1Q9ULM0 1364 aa28.24■■■□□ 2.11
DENND4A-208ENST00000568515 PPP2R1AP30153 589 aa28.24■■■□□ 2.11
DENND4A-208ENST00000568515 MAGI2Q86UL8 1455 aa28.23■■■□□ 2.11
DENND4A-208ENST00000568515 PLXNC1O60486 1568 aa28.23■■■□□ 2.11
DENND4A-208ENST00000568515 WDR43Q15061 677 aaKnown RBP eCLIP28.23■■■□□ 2.11
DENND4A-208ENST00000568515 WDR7Q9Y4E6 1490 aa28.23■■■□□ 2.11
DENND4A-208ENST00000568515 RNF17Q9BXT8 1623 aaKnown RBP28.23■■■□□ 2.11
DENND4A-208ENST00000568515 KNSTRNQ9Y448 316 aa28.23■■■□□ 2.11
DENND4A-208ENST00000568515 ZNF521Q96K83 1311 aa28.2■■■□□ 2.11
DENND4A-208ENST00000568515 TTC37Q6PGP7 1564 aa28.19■■■□□ 2.1
DENND4A-208ENST00000568515 IL27Q8NEV9 243 aa28.19■■■□□ 2.1
DENND4A-208ENST00000568515 GOLGA2Q08379 1002 aa28.18■■■□□ 2.1
DENND4A-208ENST00000568515 AMER1Q5JTC6 1135 aaPredicted RBP28.18■■■□□ 2.1
DENND4A-208ENST00000568515 DUOX2Q9NRD8 1548 aa28.18■■■□□ 2.1
DENND4A-208ENST00000568515 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.16■■■□□ 2.1
DENND4A-208ENST00000568515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.16■■■□□ 2.1
DENND4A-208ENST00000568515 FAM161AQ3B820 660 aa28.15■■■□□ 2.1
DENND4A-208ENST00000568515 C8orf34Q49A92 452 aa28.12■■■□□ 2.09
DENND4A-208ENST00000568515 SLFN5Q08AF3 891 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms