RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
KARS-209ENST00000568378 INO80Q9ULG1 1556 aaPredicted RBP15.93■□□□□ 0.14
KARS-209ENST00000568378 SYNMO15061 1565 aa15.92■□□□□ 0.14
KARS-209ENST00000568378 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
KARS-209ENST00000568378 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
KARS-209ENST00000568378 MED14O60244 1454 aa15.91■□□□□ 0.14
KARS-209ENST00000568378 FBXO31Q5XUX0 539 aaPredicted RBP15.91■□□□□ 0.14
KARS-209ENST00000568378 IQGAP1P46940 1657 aa15.91■□□□□ 0.14
KARS-209ENST00000568378 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
KARS-209ENST00000568378 DEPDC5O75140 1603 aa15.9■□□□□ 0.14
KARS-209ENST00000568378 FAM135AQ9P2D6 1515 aa15.9■□□□□ 0.14
KARS-209ENST00000568378 SETD1AO15047 1707 aaKnown RBP15.9■□□□□ 0.14
KARS-209ENST00000568378 ADGBQ8N7X0 1667 aa15.89■□□□□ 0.13
KARS-209ENST00000568378 PLEKHH2Q8IVE3 1493 aa15.89■□□□□ 0.13
KARS-209ENST00000568378 UGGT1Q9NYU2 1555 aa15.88■□□□□ 0.13
KARS-209ENST00000568378 STRCP1A6NGW2 1772 aa15.88■□□□□ 0.13
KARS-209ENST00000568378 PZPP20742 1482 aa15.88■□□□□ 0.13
KARS-209ENST00000568378 KIAA1107Q9UPP5 1409 aa15.87■□□□□ 0.13
KARS-209ENST00000568378 NLRP1Q9C000 1473 aa15.86■□□□□ 0.13
KARS-209ENST00000568378 GPATCH8Q9UKJ3 1502 aaKnown RBP15.85■□□□□ 0.13
KARS-209ENST00000568378 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
KARS-209ENST00000568378 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
KARS-209ENST00000568378 MIA2Q96PC5 1412 aa15.84■□□□□ 0.13
KARS-209ENST00000568378 WASHC2CQ9Y4E1 1318 aa15.82■□□□□ 0.12
KARS-209ENST00000568378 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
KARS-209ENST00000568378 KIF3BO15066 747 aa15.81■□□□□ 0.12
KARS-209ENST00000568378 FAM135BQ49AJ0 1406 aa15.8■□□□□ 0.12
KARS-209ENST00000568378 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
KARS-209ENST00000568378 CCNB3Q8WWL7 1395 aa15.78■□□□□ 0.12
KARS-209ENST00000568378 UPF1Q92900 1129 aaKnown RBP eCLIP15.78■□□□□ 0.12
KARS-209ENST00000568378 ZC3H13Q5T200 1668 aaKnown RBP15.76■□□□□ 0.11
KARS-209ENST00000568378 RTEL1-TNFRSF6BF6WH68 1400 aa15.75■□□□□ 0.11
KARS-209ENST00000568378 XIRP1Q702N8 1843 aaKnown RBP15.74■□□□□ 0.11
KARS-209ENST00000568378 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
KARS-209ENST00000568378 SCAF11Q99590 1463 aaKnown RBP15.73■□□□□ 0.11
KARS-209ENST00000568378 FYCO1Q9BQS8 1478 aa15.72■□□□□ 0.11
KARS-209ENST00000568378 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
KARS-209ENST00000568378 ZNF644Q9H582 1327 aaPredicted RBP15.71■□□□□ 0.11
KARS-209ENST00000568378 MBD5Q9P267 1494 aa15.7■□□□□ 0.1
KARS-209ENST00000568378 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
KARS-209ENST00000568378 JCADQ9P266 1359 aa15.69■□□□□ 0.1
KARS-209ENST00000568378 LRRC9Q6ZRR7 1453 aa15.68■□□□□ 0.1
KARS-209ENST00000568378 TMEM94Q12767 1356 aa15.68■□□□□ 0.1
KARS-209ENST00000568378 MEX3CQ5U5Q3 659 aaKnown RBP15.68■□□□□ 0.1
KARS-209ENST00000568378 ZNF772Q68DY9 489 aaPredicted RBP15.67■□□□□ 0.1
KARS-209ENST00000568378 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
KARS-209ENST00000568378 UBR1Q8IWV7 1749 aa15.66■□□□□ 0.1
KARS-209ENST00000568378 MTUS2Q5JR59 1369 aa15.66■□□□□ 0.1
KARS-209ENST00000568378 LTKP29376 864 aa15.66■□□□□ 0.1
KARS-209ENST00000568378 EID1Q9Y6B2 187 aa15.66■□□□□ 0.1
KARS-209ENST00000568378 PHLPP1O60346 1717 aa15.65■□□□□ 0.1
KARS-209ENST00000568378 CCDC141Q6ZP82 1450 aa15.65■□□□□ 0.1
KARS-209ENST00000568378 PROSER2Q86WR7 435 aaPredicted RBP15.64■□□□□ 0.09
KARS-209ENST00000568378 ABCC3O15438 1527 aa15.63■□□□□ 0.09
KARS-209ENST00000568378 TIAM1Q13009 1591 aa15.63■□□□□ 0.09
KARS-209ENST00000568378 SLIT1O75093 1534 aa15.63■□□□□ 0.09
KARS-209ENST00000568378 RBM33Q96EV2 1170 aaKnown RBP15.62■□□□□ 0.09
KARS-209ENST00000568378 NCOA2Q15596 1464 aa15.62■□□□□ 0.09
KARS-209ENST00000568378 ARHGAP23Q9P227 1491 aa15.62■□□□□ 0.09
KARS-209ENST00000568378 RXRBP28702 533 aa15.61■□□□□ 0.09
KARS-209ENST00000568378 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
KARS-209ENST00000568378 MSH6P52701 1360 aa15.61■□□□□ 0.09
KARS-209ENST00000568378 SPATA31A6Q5VVP1 1343 aa15.6■□□□□ 0.09
KARS-209ENST00000568378 LRP6O75581 1613 aa15.6■□□□□ 0.09
KARS-209ENST00000568378 KCNA6P17658 529 aa15.59■□□□□ 0.09
KARS-209ENST00000568378 SLAIN2Q9P270 581 aa15.59■□□□□ 0.09
KARS-209ENST00000568378 SRCAPQ6ZRS2 3230 aa15.58■□□□□ 0.09
KARS-209ENST00000568378 RSPH4AQ5TD94 716 aa15.58■□□□□ 0.08
KARS-209ENST00000568378 CFAP65Q6ZU64 1925 aaKnown RBP15.57■□□□□ 0.08
KARS-209ENST00000568378 TSPY4P0CV99 314 aa15.56■□□□□ 0.08
KARS-209ENST00000568378 TSPY10P0CW01 314 aa15.56■□□□□ 0.08
KARS-209ENST00000568378 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
KARS-209ENST00000568378 CAMSAP2Q08AD1 1489 aa15.56■□□□□ 0.08
KARS-209ENST00000568378 PRDM15P57071 1507 aaPredicted RBP15.56■□□□□ 0.08
KARS-209ENST00000568378 COL16A1Q07092 1604 aaPredicted RBP15.56■□□□□ 0.08
KARS-209ENST00000568378 CDK12Q9NYV4 1490 aaPredicted RBP15.55■□□□□ 0.08
KARS-209ENST00000568378 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
KARS-209ENST00000568378 TMEM2Q9UHN6 1383 aa15.55■□□□□ 0.08
KARS-209ENST00000568378 EHBP1L1Q8N3D4 1523 aa15.54■□□□□ 0.08
KARS-209ENST00000568378 NKTRP30414 1462 aaKnown RBP15.54■□□□□ 0.08
KARS-209ENST00000568378 SLC26A8Q96RN1 970 aa15.54■□□□□ 0.08
KARS-209ENST00000568378 CEP152O94986 1710 aa15.54■□□□□ 0.08
KARS-209ENST00000568378 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
KARS-209ENST00000568378 PIK3C2BO00750 1634 aa15.5■□□□□ 0.07
KARS-209ENST00000568378 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
KARS-209ENST00000568378 NUTM2BA6NNL0 878 aaPredicted RBP15.5■□□□□ 0.07
KARS-209ENST00000568378 NUTM2EB1AL46 878 aaPredicted RBP15.5■□□□□ 0.07
KARS-209ENST00000568378 FOXD1Q16676 465 aa15.5■□□□□ 0.07
KARS-209ENST00000568378 NUTM2AQ8IVF1 878 aaPredicted RBP15.5■□□□□ 0.07
KARS-209ENST00000568378 BCANQ96GW7 911 aa15.5■□□□□ 0.07
KARS-209ENST00000568378 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
KARS-209ENST00000568378 SHPRHQ149N8 1683 aa15.49■□□□□ 0.07
KARS-209ENST00000568378 MROH1Q8NDA8 1641 aa15.49■□□□□ 0.07
KARS-209ENST00000568378 ARHGEF5Q12774 1597 aa15.49■□□□□ 0.07
KARS-209ENST00000568378 NUTM2DQ5VT03 806 aaPredicted RBP15.48■□□□□ 0.07
KARS-209ENST00000568378 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
KARS-209ENST00000568378 AFF2P51816 1311 aa15.47■□□□□ 0.07
KARS-209ENST00000568378 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
KARS-209ENST00000568378 TET3O43151 1660 aa15.47■□□□□ 0.07
KARS-209ENST00000568378 KDM5AP29375 1690 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms