RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 NISCHQ9Y2I1 1504 aa24.8■■□□□ 1.56
KARS-209ENST00000568378 ABCC9O60706 1549 aa23.3■■□□□ 1.32
KARS-209ENST00000568378 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
KARS-209ENST00000568378 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
KARS-209ENST00000568378 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
KARS-209ENST00000568378 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
KARS-209ENST00000568378 NACADO15069 1562 aa21.51■■□□□ 1.03
KARS-209ENST00000568378 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
KARS-209ENST00000568378 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
KARS-209ENST00000568378 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
KARS-209ENST00000568378 DNAJC5Q9H3Z4 198 aa21.14■□□□□ 0.97
KARS-209ENST00000568378 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
KARS-209ENST00000568378 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
KARS-209ENST00000568378 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
KARS-209ENST00000568378 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
KARS-209ENST00000568378 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
KARS-209ENST00000568378 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
KARS-209ENST00000568378 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
KARS-209ENST00000568378 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
KARS-209ENST00000568378 CUX2O14529 1486 aa20.36■□□□□ 0.85
KARS-209ENST00000568378 ERCC6Q03468 1493 aa20.21■□□□□ 0.83
KARS-209ENST00000568378 TRIM41Q8WV44 630 aa20■□□□□ 0.79
KARS-209ENST00000568378 NCAPD3P42695 1498 aa19.85■□□□□ 0.77
KARS-209ENST00000568378 NESP48681 1621 aa19.79■□□□□ 0.76
KARS-209ENST00000568378 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
KARS-209ENST00000568378 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
KARS-209ENST00000568378 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
KARS-209ENST00000568378 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
KARS-209ENST00000568378 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
KARS-209ENST00000568378 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
KARS-209ENST00000568378 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
KARS-209ENST00000568378 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
KARS-209ENST00000568378 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
KARS-209ENST00000568378 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
KARS-209ENST00000568378 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
KARS-209ENST00000568378 OSCARQ8IYS5 282 aa19.33■□□□□ 0.68
KARS-209ENST00000568378 WDR62O43379 1518 aa19.3■□□□□ 0.68
KARS-209ENST00000568378 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
KARS-209ENST00000568378 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
KARS-209ENST00000568378 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
KARS-209ENST00000568378 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
KARS-209ENST00000568378 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
KARS-209ENST00000568378 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
KARS-209ENST00000568378 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
KARS-209ENST00000568378 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
KARS-209ENST00000568378 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
KARS-209ENST00000568378 ARHGEF11O15085 1522 aa19■□□□□ 0.63
KARS-209ENST00000568378 TRHP20396 242 aaPredicted RBP19■□□□□ 0.63
KARS-209ENST00000568378 CYB5RLQ6IPT4 315 aa18.94■□□□□ 0.62
KARS-209ENST00000568378 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
KARS-209ENST00000568378 CFTRP13569 1480 aa18.85■□□□□ 0.61
KARS-209ENST00000568378 WIZO95785 1651 aa18.85■□□□□ 0.61
KARS-209ENST00000568378 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
KARS-209ENST00000568378 ARAP1Q96P48 1450 aa18.77■□□□□ 0.59
KARS-209ENST00000568378 IFT140Q96RY7 1462 aa18.77■□□□□ 0.59
KARS-209ENST00000568378 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
KARS-209ENST00000568378 CHD1O14646 1710 aa18.66■□□□□ 0.58
KARS-209ENST00000568378 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
KARS-209ENST00000568378 FBLN2P98095 1184 aa18.63■□□□□ 0.57
KARS-209ENST00000568378 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
KARS-209ENST00000568378 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
KARS-209ENST00000568378 TOP2AP11388 1531 aaKnown RBP18.57■□□□□ 0.56
KARS-209ENST00000568378 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
KARS-209ENST00000568378 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.561e-6■■■■□ 19.3
KARS-209ENST00000568378 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
KARS-209ENST00000568378 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
KARS-209ENST00000568378 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
KARS-209ENST00000568378 CLASP1Q7Z460 1538 aa18.4■□□□□ 0.54
KARS-209ENST00000568378 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
KARS-209ENST00000568378 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
KARS-209ENST00000568378 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
KARS-209ENST00000568378 CHMP7Q8WUX9 453 aaPredicted RBP18.35■□□□□ 0.53
KARS-209ENST00000568378 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
KARS-209ENST00000568378 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
KARS-209ENST00000568378 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
KARS-209ENST00000568378 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
KARS-209ENST00000568378 SOGA1O94964 1423 aa18.27■□□□□ 0.52
KARS-209ENST00000568378 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
KARS-209ENST00000568378 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
KARS-209ENST00000568378 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
KARS-209ENST00000568378 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
KARS-209ENST00000568378 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
KARS-209ENST00000568378 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
KARS-209ENST00000568378 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
KARS-209ENST00000568378 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
KARS-209ENST00000568378 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
KARS-209ENST00000568378 CUX1P39880 1505 aa18■□□□□ 0.47
KARS-209ENST00000568378 KDM4FA0A1W2PPD8 638 aa17.99■□□□□ 0.47
KARS-209ENST00000568378 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
KARS-209ENST00000568378 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
KARS-209ENST00000568378 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
KARS-209ENST00000568378 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
KARS-209ENST00000568378 NUP160Q12769 1436 aa17.89■□□□□ 0.46
KARS-209ENST00000568378 KDM6BO15054 1643 aa17.89■□□□□ 0.45
KARS-209ENST00000568378 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
KARS-209ENST00000568378 ABCC10Q5T3U5 1492 aa17.88■□□□□ 0.45
KARS-209ENST00000568378 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
KARS-209ENST00000568378 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
KARS-209ENST00000568378 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
KARS-209ENST00000568378 DIP2BQ9P265 1576 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms