RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 GGT6Q6P531 493 aa16.32■□□□□ 0.2
ABCA3-205ENST00000567910 DEPDC5O75140 1603 aa16.31■□□□□ 0.2
ABCA3-205ENST00000567910 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
ABCA3-205ENST00000567910 ANKRD30AQ9BXX3 1397 aa16.31■□□□□ 0.2
ABCA3-205ENST00000567910 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
ABCA3-205ENST00000567910 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
ABCA3-205ENST00000567910 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
ABCA3-205ENST00000567910 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
ABCA3-205ENST00000567910 LMTK3Q96Q04 1460 aa16.29■□□□□ 0.2
ABCA3-205ENST00000567910 ZMYM3Q14202 1370 aa16.28■□□□□ 0.2
ABCA3-205ENST00000567910 ABCC3O15438 1527 aa16.28■□□□□ 0.2
ABCA3-205ENST00000567910 ROCK1Q13464 1354 aa16.27■□□□□ 0.2
ABCA3-205ENST00000567910 FAM135AQ9P2D6 1515 aa16.27■□□□□ 0.2
ABCA3-205ENST00000567910 CEP152O94986 1710 aa16.27■□□□□ 0.19
ABCA3-205ENST00000567910 ITGAEP38570 1179 aa16.26■□□□□ 0.19
ABCA3-205ENST00000567910 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
ABCA3-205ENST00000567910 ZC3H13Q5T200 1668 aaKnown RBP16.24■□□□□ 0.19
ABCA3-205ENST00000567910 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
ABCA3-205ENST00000567910 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
ABCA3-205ENST00000567910 PREX1Q8TCU6 1659 aa16.24■□□□□ 0.19
ABCA3-205ENST00000567910 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
ABCA3-205ENST00000567910 SETD1BQ9UPS6 1966 aaKnown RBP16.21■□□□□ 0.19
ABCA3-205ENST00000567910 ESF1Q9H501 851 aaKnown RBP16.21■□□□□ 0.19
ABCA3-205ENST00000567910 PZPP20742 1482 aa16.21■□□□□ 0.19
ABCA3-205ENST00000567910 UNC13BO14795 1591 aa16.21■□□□□ 0.18
ABCA3-205ENST00000567910 NPATQ14207 1427 aa16.2■□□□□ 0.18
ABCA3-205ENST00000567910 GCC2Q8IWJ2 1684 aa16.2■□□□□ 0.18
ABCA3-205ENST00000567910 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
ABCA3-205ENST00000567910 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
ABCA3-205ENST00000567910 FBXO31Q5XUX0 539 aaPredicted RBP16.19■□□□□ 0.18
ABCA3-205ENST00000567910 MYO3AQ8NEV4 1616 aa16.19■□□□□ 0.18
ABCA3-205ENST00000567910 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
ABCA3-205ENST00000567910 NAIPQ13075 1403 aa16.19■□□□□ 0.18
ABCA3-205ENST00000567910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
ABCA3-205ENST00000567910 SPATA31D1Q6ZQQ2 1576 aa16.16■□□□□ 0.18
ABCA3-205ENST00000567910 ZNF142P52746 1687 aaPredicted RBP16.15■□□□□ 0.18
ABCA3-205ENST00000567910 HFM1A2PYH4 1435 aa16.15■□□□□ 0.18
ABCA3-205ENST00000567910 HSPA2P54652 639 aa16.15■□□□□ 0.18
ABCA3-205ENST00000567910 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
ABCA3-205ENST00000567910 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.18
ABCA3-205ENST00000567910 ARHGAP31Q2M1Z3 1444 aa16.14■□□□□ 0.17
ABCA3-205ENST00000567910 UHRF1BP1Q6BDS2 1440 aa16.14■□□□□ 0.17
ABCA3-205ENST00000567910 ERVK-7P63135 1459 aa16.14■□□□□ 0.17
ABCA3-205ENST00000567910 IQGAP3Q86VI3 1631 aa16.13■□□□□ 0.17
ABCA3-205ENST00000567910 CEP170BQ9Y4F5 1589 aaPredicted RBP16.13■□□□□ 0.17
ABCA3-205ENST00000567910 TET3O43151 1660 aa16.11■□□□□ 0.17
ABCA3-205ENST00000567910 STRCQ7RTU9 1775 aa16.11■□□□□ 0.17
ABCA3-205ENST00000567910 TNRQ92752 1358 aa16.11■□□□□ 0.17
ABCA3-205ENST00000567910 SYNMO15061 1565 aa16.09■□□□□ 0.17
ABCA3-205ENST00000567910 E9PCH4 1651 aa16.09■□□□□ 0.17
ABCA3-205ENST00000567910 KANK1Q14678 1352 aa16.09■□□□□ 0.17
ABCA3-205ENST00000567910 PCGF6Q9BYE7 350 aa16.08■□□□□ 0.16
ABCA3-205ENST00000567910 A2ML1A8K2U0 1454 aa16.08■□□□□ 0.16
ABCA3-205ENST00000567910 NOS1P29475 1434 aa16.07■□□□□ 0.16
ABCA3-205ENST00000567910 NUP155O75694 1391 aa16.05■□□□□ 0.16
ABCA3-205ENST00000567910 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
ABCA3-205ENST00000567910 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
ABCA3-205ENST00000567910 UBR1Q8IWV7 1749 aa16.03■□□□□ 0.16
ABCA3-205ENST00000567910 PIK3C2BO00750 1634 aa16.02■□□□□ 0.16
ABCA3-205ENST00000567910 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
ABCA3-205ENST00000567910 PLA2R1Q13018 1463 aa16■□□□□ 0.15
ABCA3-205ENST00000567910 NEURL4Q96JN8 1562 aa15.99■□□□□ 0.15
ABCA3-205ENST00000567910 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
ABCA3-205ENST00000567910 IDI1Q13907 227 aa15.97■□□□□ 0.15
ABCA3-205ENST00000567910 SPHKAPQ2M3C7 1700 aa15.97■□□□□ 0.15
ABCA3-205ENST00000567910 MYO5BQ9ULV0 1848 aa15.96■□□□□ 0.15
ABCA3-205ENST00000567910 POLR1AO95602 1720 aaPredicted RBP15.96■□□□□ 0.15
ABCA3-205ENST00000567910 KDM5AP29375 1690 aaKnown RBP15.95■□□□□ 0.14
ABCA3-205ENST00000567910 NCKAP5LQ9HCH0 1330 aa15.95■□□□□ 0.14
ABCA3-205ENST00000567910 PTPRTO14522 1441 aa15.95■□□□□ 0.14
ABCA3-205ENST00000567910 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
ABCA3-205ENST00000567910 ADGRB3O60242 1522 aa15.94■□□□□ 0.14
ABCA3-205ENST00000567910 ARHGAP23Q9P227 1491 aa15.94■□□□□ 0.14
ABCA3-205ENST00000567910 TMEM131LA2VDJ0 1609 aa15.94■□□□□ 0.14
ABCA3-205ENST00000567910 SLIT1O75093 1534 aa15.93■□□□□ 0.14
ABCA3-205ENST00000567910 CLTCL1P53675 1640 aa15.92■□□□□ 0.14
ABCA3-205ENST00000567910 TRPM2O94759 1503 aa15.91■□□□□ 0.14
ABCA3-205ENST00000567910 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
ABCA3-205ENST00000567910 PKD2Q13563 968 aa15.9■□□□□ 0.14
ABCA3-205ENST00000567910 THEMISQ8N1K5 641 aaPredicted RBP15.9■□□□□ 0.14
ABCA3-205ENST00000567910 MED14O60244 1454 aa15.9■□□□□ 0.14
ABCA3-205ENST00000567910 LTKP29376 864 aa15.89■□□□□ 0.13
ABCA3-205ENST00000567910 FOXD1Q16676 465 aa15.89■□□□□ 0.13
ABCA3-205ENST00000567910 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
ABCA3-205ENST00000567910 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
ABCA3-205ENST00000567910 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
ABCA3-205ENST00000567910 ZFYVE9O95405 1425 aa15.87■□□□□ 0.13
ABCA3-205ENST00000567910 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
ABCA3-205ENST00000567910 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
ABCA3-205ENST00000567910 MPHOSPH9Q99550 1183 aa15.86■□□□□ 0.13
ABCA3-205ENST00000567910 LTBP4Q8N2S1 1624 aa15.85■□□□□ 0.13
ABCA3-205ENST00000567910 NPHP4O75161 1426 aaPredicted RBP15.85■□□□□ 0.13
ABCA3-205ENST00000567910 ANKLE2Q86XL3 938 aa15.84■□□□□ 0.13
ABCA3-205ENST00000567910 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
ABCA3-205ENST00000567910 STRCP1A6NGW2 1772 aa15.82■□□□□ 0.12
ABCA3-205ENST00000567910 HRCP23327 699 aa15.81■□□□□ 0.12
ABCA3-205ENST00000567910 ZNF335Q9H4Z2 1342 aaPredicted RBP15.81■□□□□ 0.12
ABCA3-205ENST00000567910 RIMS2Q9UQ26 1411 aa15.81■□□□□ 0.12
ABCA3-205ENST00000567910 KIF1BO60333 1816 aa15.8■□□□□ 0.12
ABCA3-205ENST00000567910 TXNDC2Q86VQ3 553 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms