RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
CNOT1-210ENST00000567133 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
CNOT1-210ENST00000567133 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
CNOT1-210ENST00000567133 PPP6R1Q9UPN7 881 aa16.93■□□□□ 0.3
CNOT1-210ENST00000567133 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
CNOT1-210ENST00000567133 FBXO31Q5XUX0 539 aaPredicted RBP16.92■□□□□ 0.3
CNOT1-210ENST00000567133 NPATQ14207 1427 aa16.92■□□□□ 0.3
CNOT1-210ENST00000567133 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
CNOT1-210ENST00000567133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.31e-11■■□□□ 11.8
CNOT1-210ENST00000567133 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
CNOT1-210ENST00000567133 RNF17Q9BXT8 1623 aaKnown RBP16.9■□□□□ 0.3
CNOT1-210ENST00000567133 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
CNOT1-210ENST00000567133 ITGAEP38570 1179 aa16.9■□□□□ 0.3
CNOT1-210ENST00000567133 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.3
CNOT1-210ENST00000567133 CEP152O94986 1710 aa16.88■□□□□ 0.29
CNOT1-210ENST00000567133 STRCQ7RTU9 1775 aa16.87■□□□□ 0.29
CNOT1-210ENST00000567133 ABCC3O15438 1527 aa16.86■□□□□ 0.29
CNOT1-210ENST00000567133 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
CNOT1-210ENST00000567133 MROH1Q8NDA8 1641 aa16.86■□□□□ 0.29
CNOT1-210ENST00000567133 PZPP20742 1482 aa16.86■□□□□ 0.29
CNOT1-210ENST00000567133 CEP170BQ9Y4F5 1589 aaPredicted RBP16.85■□□□□ 0.29
CNOT1-210ENST00000567133 CAMSAP1Q5T5Y3 1602 aa16.85■□□□□ 0.29
CNOT1-210ENST00000567133 TNRQ92752 1358 aa16.85■□□□□ 0.29
CNOT1-210ENST00000567133 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
CNOT1-210ENST00000567133 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
CNOT1-210ENST00000567133 NCOA1Q15788 1441 aa16.84■□□□□ 0.29
CNOT1-210ENST00000567133 FAM135AQ9P2D6 1515 aa16.84■□□□□ 0.29
CNOT1-210ENST00000567133 ZNF142P52746 1687 aaPredicted RBP16.83■□□□□ 0.28
CNOT1-210ENST00000567133 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
CNOT1-210ENST00000567133 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
CNOT1-210ENST00000567133 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
CNOT1-210ENST00000567133 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
CNOT1-210ENST00000567133 KANK1Q14678 1352 aa16.8■□□□□ 0.28
CNOT1-210ENST00000567133 PRDM15P57071 1507 aaPredicted RBP16.8■□□□□ 0.28
CNOT1-210ENST00000567133 A2ML1A8K2U0 1454 aa16.8■□□□□ 0.28
CNOT1-210ENST00000567133 DEPDC5O75140 1603 aa16.78■□□□□ 0.28
CNOT1-210ENST00000567133 ERVK-7P63135 1459 aa16.77■□□□□ 0.28
CNOT1-210ENST00000567133 ANKRD50Q9ULJ7 1429 aa16.77■□□□□ 0.27
CNOT1-210ENST00000567133 SPATA31D1Q6ZQQ2 1576 aa16.74■□□□□ 0.27
CNOT1-210ENST00000567133 PTPRTO14522 1441 aa16.74■□□□□ 0.27
CNOT1-210ENST00000567133 CERKQ8TCT0 537 aa16.73■□□□□ 0.27
CNOT1-210ENST00000567133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNOT1-210ENST00000567133 NLRP1Q9C000 1473 aa16.73■□□□□ 0.27
CNOT1-210ENST00000567133 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
CNOT1-210ENST00000567133 PKD2Q13563 968 aa16.72■□□□□ 0.27
CNOT1-210ENST00000567133 PLA2R1Q13018 1463 aa16.72■□□□□ 0.27
CNOT1-210ENST00000567133 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
CNOT1-210ENST00000567133 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
CNOT1-210ENST00000567133 POLR1AO95602 1720 aaPredicted RBP16.7■□□□□ 0.26
CNOT1-210ENST00000567133 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
CNOT1-210ENST00000567133 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
CNOT1-210ENST00000567133 ANKLE2Q86XL3 938 aa16.68■□□□□ 0.26
CNOT1-210ENST00000567133 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
CNOT1-210ENST00000567133 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
CNOT1-210ENST00000567133 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
CNOT1-210ENST00000567133 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
CNOT1-210ENST00000567133 LMTK2Q8IWU2 1503 aa16.67■□□□□ 0.26
CNOT1-210ENST00000567133 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
CNOT1-210ENST00000567133 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
CNOT1-210ENST00000567133 UNC13BO14795 1591 aa16.65■□□□□ 0.26
CNOT1-210ENST00000567133 NEURL4Q96JN8 1562 aa16.65■□□□□ 0.26
CNOT1-210ENST00000567133 PIK3C2BO00750 1634 aa16.64■□□□□ 0.25
CNOT1-210ENST00000567133 TET3O43151 1660 aa16.63■□□□□ 0.25
CNOT1-210ENST00000567133 SYNMO15061 1565 aa16.63■□□□□ 0.25
CNOT1-210ENST00000567133 NUP155O75694 1391 aa16.63■□□□□ 0.25
CNOT1-210ENST00000567133 IDI1Q13907 227 aa16.62■□□□□ 0.25
CNOT1-210ENST00000567133 LTBP4Q8N2S1 1624 aa16.62■□□□□ 0.25
CNOT1-210ENST00000567133 NPHP4O75161 1426 aaPredicted RBP16.62■□□□□ 0.25
CNOT1-210ENST00000567133 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
CNOT1-210ENST00000567133 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
CNOT1-210ENST00000567133 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
CNOT1-210ENST00000567133 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
CNOT1-210ENST00000567133 NOS1P29475 1434 aa16.59■□□□□ 0.25
CNOT1-210ENST00000567133 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
CNOT1-210ENST00000567133 E9PCH4 1651 aa16.59■□□□□ 0.25
CNOT1-210ENST00000567133 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
CNOT1-210ENST00000567133 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
CNOT1-210ENST00000567133 SCAF11Q99590 1463 aaKnown RBP16.57■□□□□ 0.24
CNOT1-210ENST00000567133 LTKP29376 864 aa16.57■□□□□ 0.24
CNOT1-210ENST00000567133 EID1Q9Y6B2 187 aa16.57■□□□□ 0.24
CNOT1-210ENST00000567133 TRIM52Q96A61 297 aa16.56■□□□□ 0.24
CNOT1-210ENST00000567133 NAIPQ13075 1403 aa16.55■□□□□ 0.24
CNOT1-210ENST00000567133 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
CNOT1-210ENST00000567133 MED14O60244 1454 aa16.54■□□□□ 0.24
CNOT1-210ENST00000567133 MYO5BQ9ULV0 1848 aa16.54■□□□□ 0.24
CNOT1-210ENST00000567133 TMEM2Q9UHN6 1383 aa16.54■□□□□ 0.24
CNOT1-210ENST00000567133 BCANQ96GW7 911 aa16.54■□□□□ 0.24
CNOT1-210ENST00000567133 SLIT1O75093 1534 aa16.54■□□□□ 0.24
CNOT1-210ENST00000567133 SLC52A1Q9NWF4 448 aa16.53■□□□□ 0.24
CNOT1-210ENST00000567133 ARHGAP23Q9P227 1491 aa16.53■□□□□ 0.24
CNOT1-210ENST00000567133 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
CNOT1-210ENST00000567133 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
CNOT1-210ENST00000567133 HFM1A2PYH4 1435 aa16.5■□□□□ 0.23
CNOT1-210ENST00000567133 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
CNOT1-210ENST00000567133 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
CNOT1-210ENST00000567133 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
CNOT1-210ENST00000567133 CPS1P31327 1500 aa16.48■□□□□ 0.23
CNOT1-210ENST00000567133 STRCP1A6NGW2 1772 aa16.48■□□□□ 0.23
CNOT1-210ENST00000567133 TMEM131LA2VDJ0 1609 aa16.48■□□□□ 0.23
CNOT1-210ENST00000567133 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms