RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 HRCP23327 699 aa23.23■■□□□ 1.31
SNHG20-204ENST00000566583 PRDM15P57071 1507 aaPredicted RBP23.19■■□□□ 1.3
SNHG20-204ENST00000566583 KDM5DQ9BY66 1539 aa23.19■■□□□ 1.3
SNHG20-204ENST00000566583 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
SNHG20-204ENST00000566583 IQGAP3Q86VI3 1631 aa23.16■■□□□ 1.3
SNHG20-204ENST00000566583 KIF3BO15066 747 aa23.13■■□□□ 1.29
SNHG20-204ENST00000566583 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
SNHG20-204ENST00000566583 CEP152O94986 1710 aa23.11■■□□□ 1.29
SNHG20-204ENST00000566583 PZPP20742 1482 aa23.1■■□□□ 1.29
SNHG20-204ENST00000566583 ZC3H13Q5T200 1668 aaKnown RBP23.09■■□□□ 1.29
SNHG20-204ENST00000566583 FAM135AQ9P2D6 1515 aa23.09■■□□□ 1.29
SNHG20-204ENST00000566583 LMTK2Q8IWU2 1503 aa23.07■■□□□ 1.28
SNHG20-204ENST00000566583 TET3O43151 1660 aa23.07■■□□□ 1.28
SNHG20-204ENST00000566583 ABCC3O15438 1527 aa23.05■■□□□ 1.28
SNHG20-204ENST00000566583 ADAMTSL3P82987 1691 aa23.04■■□□□ 1.28
SNHG20-204ENST00000566583 NUP155O75694 1391 aa23.04■■□□□ 1.28
SNHG20-204ENST00000566583 FER1L4A9Z1Z3 1794 aa23.02■■□□□ 1.28
SNHG20-204ENST00000566583 CLTCQ00610 1675 aaKnown RBP23.02■■□□□ 1.28
SNHG20-204ENST00000566583 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
SNHG20-204ENST00000566583 GGT6Q6P531 493 aa23.02■■□□□ 1.28
SNHG20-204ENST00000566583 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
SNHG20-204ENST00000566583 E9PCH4 1651 aa23.01■■□□□ 1.27
SNHG20-204ENST00000566583 MROH2AA6NES4 1674 aa23.01■■□□□ 1.27
SNHG20-204ENST00000566583 TRIM52Q96A61 297 aa23■■□□□ 1.27
SNHG20-204ENST00000566583 KANK1Q14678 1352 aa22.99■■□□□ 1.27
SNHG20-204ENST00000566583 DHX57Q6P158 1386 aaKnown RBP22.99■■□□□ 1.27
SNHG20-204ENST00000566583 EFCAB6Q5THR3 1501 aa22.99■■□□□ 1.27
SNHG20-204ENST00000566583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.272e-7■■□□□ 13.1
SNHG20-204ENST00000566583 ARID4BQ4LE39 1312 aaPredicted RBP22.98■■□□□ 1.27
SNHG20-204ENST00000566583 MADDQ8WXG6 1647 aa22.96■■□□□ 1.27
SNHG20-204ENST00000566583 MPHOSPH9Q99550 1183 aa22.96■■□□□ 1.27
SNHG20-204ENST00000566583 MLECQ14165 292 aa22.95■■□□□ 1.26
SNHG20-204ENST00000566583 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
SNHG20-204ENST00000566583 ARHGAP31Q2M1Z3 1444 aa22.94■■□□□ 1.26
SNHG20-204ENST00000566583 CNTLNQ9NXG0 1405 aa22.92■■□□□ 1.26
SNHG20-204ENST00000566583 WASHC2CQ9Y4E1 1318 aa22.92■■□□□ 1.26
SNHG20-204ENST00000566583 RIMS1Q86UR5 1692 aaKnown RBP22.91■■□□□ 1.26
SNHG20-204ENST00000566583 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
SNHG20-204ENST00000566583 C3P01024 1663 aa22.9■■□□□ 1.26
SNHG20-204ENST00000566583 NPATQ14207 1427 aa22.9■■□□□ 1.26
SNHG20-204ENST00000566583 SPHKAPQ2M3C7 1700 aa22.9■■□□□ 1.26
SNHG20-204ENST00000566583 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
SNHG20-204ENST00000566583 PREX1Q8TCU6 1659 aa22.88■■□□□ 1.25
SNHG20-204ENST00000566583 PKD2Q13563 968 aa22.87■■□□□ 1.25
SNHG20-204ENST00000566583 PTPRTO14522 1441 aa22.85■■□□□ 1.25
SNHG20-204ENST00000566583 PLA2R1Q13018 1463 aa22.85■■□□□ 1.25
SNHG20-204ENST00000566583 ZMYM3Q14202 1370 aa22.84■■□□□ 1.25
SNHG20-204ENST00000566583 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
SNHG20-204ENST00000566583 NOS1P29475 1434 aa22.82■■□□□ 1.24
SNHG20-204ENST00000566583 SPATA31D1Q6ZQQ2 1576 aa22.82■■□□□ 1.24
SNHG20-204ENST00000566583 FOXD1Q16676 465 aa22.82■■□□□ 1.24
SNHG20-204ENST00000566583 SYNMO15061 1565 aa22.81■■□□□ 1.24
SNHG20-204ENST00000566583 TRPM2O94759 1503 aa22.81■■□□□ 1.24
SNHG20-204ENST00000566583 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
SNHG20-204ENST00000566583 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
SNHG20-204ENST00000566583 ESF1Q9H501 851 aaKnown RBP22.78■■□□□ 1.24
SNHG20-204ENST00000566583 CLSPNQ9HAW4 1339 aa22.77■■□□□ 1.24
SNHG20-204ENST00000566583 PTPRMP28827 1452 aa22.76■■□□□ 1.23
SNHG20-204ENST00000566583 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
SNHG20-204ENST00000566583 SETD1BQ9UPS6 1966 aaKnown RBP22.75■■□□□ 1.23
SNHG20-204ENST00000566583 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
SNHG20-204ENST00000566583 FBXO31Q5XUX0 539 aaPredicted RBP22.73■■□□□ 1.23
SNHG20-204ENST00000566583 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
SNHG20-204ENST00000566583 CCER1Q8TC90 406 aaPredicted RBP22.72■■□□□ 1.23
SNHG20-204ENST00000566583 KIF1BO60333 1816 aa22.71■■□□□ 1.23
SNHG20-204ENST00000566583 CEBPAP49715 358 aaPredicted RBP22.7■■□□□ 1.22
SNHG20-204ENST00000566583 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
SNHG20-204ENST00000566583 NEURL4Q96JN8 1562 aa22.68■■□□□ 1.22
SNHG20-204ENST00000566583 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
SNHG20-204ENST00000566583 MYO3AQ8NEV4 1616 aa22.66■■□□□ 1.22
SNHG20-204ENST00000566583 TNRQ92752 1358 aa22.66■■□□□ 1.22
SNHG20-204ENST00000566583 CCDC144AA2RUR9 1427 aa22.65■■□□□ 1.22
SNHG20-204ENST00000566583 SIN3AQ96ST3 1273 aa22.65■■□□□ 1.22
SNHG20-204ENST00000566583 TMEM131LA2VDJ0 1609 aa22.64■■□□□ 1.21
SNHG20-204ENST00000566583 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
SNHG20-204ENST00000566583 ADGRB3O60242 1522 aa22.62■■□□□ 1.21
SNHG20-204ENST00000566583 SLC52A1Q9NWF4 448 aa22.62■■□□□ 1.21
SNHG20-204ENST00000566583 SPATA31E1Q6ZUB1 1445 aa22.62■■□□□ 1.21
SNHG20-204ENST00000566583 UBR1Q8IWV7 1749 aa22.62■■□□□ 1.21
SNHG20-204ENST00000566583 NLRP1Q9C000 1473 aa22.62■■□□□ 1.21
SNHG20-204ENST00000566583 IDI1Q13907 227 aa22.6■■□□□ 1.21
SNHG20-204ENST00000566583 IFT172Q9UG01 1749 aa22.59■■□□□ 1.21
SNHG20-204ENST00000566583 CEP170BQ9Y4F5 1589 aaPredicted RBP22.56■■□□□ 1.2
SNHG20-204ENST00000566583 A2ML1A8K2U0 1454 aa22.55■■□□□ 1.2
SNHG20-204ENST00000566583 PPLO60437 1756 aa22.55■■□□□ 1.2
SNHG20-204ENST00000566583 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
SNHG20-204ENST00000566583 NEUROD1Q13562 356 aa22.52■■□□□ 1.2
SNHG20-204ENST00000566583 NEXMIFQ5QGS0 1516 aa22.49■■□□□ 1.19
SNHG20-204ENST00000566583 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
SNHG20-204ENST00000566583 UHRF1BP1Q6BDS2 1440 aa22.46■■□□□ 1.19
SNHG20-204ENST00000566583 ARHGAP23Q9P227 1491 aa22.46■■□□□ 1.19
SNHG20-204ENST00000566583 SLIT1O75093 1534 aa22.45■■□□□ 1.19
SNHG20-204ENST00000566583 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
SNHG20-204ENST00000566583 ZFYVE9O95405 1425 aa22.45■■□□□ 1.18
SNHG20-204ENST00000566583 TONSLQ96HA7 1378 aa22.43■■□□□ 1.18
SNHG20-204ENST00000566583 RPGRIP1LQ68CZ1 1315 aa22.42■■□□□ 1.18
SNHG20-204ENST00000566583 MYOM2P54296 1465 aa22.42■■□□□ 1.18
SNHG20-204ENST00000566583 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
SNHG20-204ENST00000566583 RGL3Q3MIN7 710 aa22.41■■□□□ 1.18
SNHG20-204ENST00000566583 LMTK3Q96Q04 1460 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms