RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 UHRF1BP1LA0JNW5 1464 aa12.75□□□□□ -0.37
BBS4-210ENST00000566400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.75□□□□□ -0.37
BBS4-210ENST00000566400 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
BBS4-210ENST00000566400 SYCP2Q9BX26 1530 aa12.74□□□□□ -0.37
BBS4-210ENST00000566400 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
BBS4-210ENST00000566400 ERBINQ96RT1 1412 aa12.73□□□□□ -0.37
BBS4-210ENST00000566400 CARD11Q9BXL7 1154 aa12.73□□□□□ -0.37
BBS4-210ENST00000566400 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
BBS4-210ENST00000566400 KIF13AQ9H1H9 1805 aa12.73□□□□□ -0.37
BBS4-210ENST00000566400 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
BBS4-210ENST00000566400 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
BBS4-210ENST00000566400 IQGAP3Q86VI3 1631 aa12.72□□□□□ -0.37
BBS4-210ENST00000566400 ATP10AO60312 1499 aa12.71□□□□□ -0.37
BBS4-210ENST00000566400 ARAP3Q8WWN8 1544 aa12.71□□□□□ -0.37
BBS4-210ENST00000566400 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.38
BBS4-210ENST00000566400 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.38
BBS4-210ENST00000566400 PLCH2O75038 1416 aa12.71□□□□□ -0.38
BBS4-210ENST00000566400 LAMC1P11047 1609 aa12.7□□□□□ -0.38
BBS4-210ENST00000566400 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
BBS4-210ENST00000566400 BCANQ96GW7 911 aa12.69□□□□□ -0.38
BBS4-210ENST00000566400 MAGI2Q86UL8 1455 aa12.69□□□□□ -0.38
BBS4-210ENST00000566400 BCORL1Q5H9F3 1711 aa12.69□□□□□ -0.38
BBS4-210ENST00000566400 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
BBS4-210ENST00000566400 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
BBS4-210ENST00000566400 DCAF11Q8TEB1 546 aa12.68□□□□□ -0.38
BBS4-210ENST00000566400 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
BBS4-210ENST00000566400 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
BBS4-210ENST00000566400 RALBP1Q15311 655 aa12.67□□□□□ -0.38
BBS4-210ENST00000566400 RTEL1-TNFRSF6BF6WH68 1400 aa12.67□□□□□ -0.38
BBS4-210ENST00000566400 GPRASP1Q5JY77 1395 aa12.67□□□□□ -0.38
BBS4-210ENST00000566400 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
BBS4-210ENST00000566400 TRPM1Q7Z4N2 1603 aa12.67□□□□□ -0.38
BBS4-210ENST00000566400 ABCC1P33527 1531 aa12.65□□□□□ -0.38
BBS4-210ENST00000566400 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
BBS4-210ENST00000566400 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
BBS4-210ENST00000566400 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
BBS4-210ENST00000566400 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
BBS4-210ENST00000566400 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
BBS4-210ENST00000566400 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
BBS4-210ENST00000566400 E9PCH4 1651 aa12.63□□□□□ -0.39
BBS4-210ENST00000566400 ST20-MTHFSA0A0A6YYL1 179 aa12.63□□□□□ -0.39
BBS4-210ENST00000566400 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
BBS4-210ENST00000566400 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
BBS4-210ENST00000566400 POLR3GLQ9BT43 218 aa12.61□□□□□ -0.39
BBS4-210ENST00000566400 PRDM15P57071 1507 aaPredicted RBP12.61□□□□□ -0.39
BBS4-210ENST00000566400 A2MP01023 1474 aa12.6□□□□□ -0.39
BBS4-210ENST00000566400 PLA2R1Q13018 1463 aa12.6□□□□□ -0.39
BBS4-210ENST00000566400 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
BBS4-210ENST00000566400 INSRP06213 1382 aa12.59□□□□□ -0.39
BBS4-210ENST00000566400 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
BBS4-210ENST00000566400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.39
BBS4-210ENST00000566400 NUDCQ9Y266 331 aa12.58□□□□□ -0.39
BBS4-210ENST00000566400 ZMYM4Q5VZL5 1548 aa12.58□□□□□ -0.4
BBS4-210ENST00000566400 PNISRQ8TF01 805 aaKnown RBP12.58□□□□□ -0.4
BBS4-210ENST00000566400 COL17A1Q9UMD9 1497 aaPredicted RBP12.58□□□□□ -0.4
BBS4-210ENST00000566400 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
BBS4-210ENST00000566400 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
BBS4-210ENST00000566400 NEURL4Q96JN8 1562 aa12.57□□□□□ -0.4
BBS4-210ENST00000566400 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
BBS4-210ENST00000566400 KANK1Q14678 1352 aa12.57□□□□□ -0.4
BBS4-210ENST00000566400 TRPM2O94759 1503 aa12.56□□□□□ -0.4
BBS4-210ENST00000566400 TMF1P82094 1093 aa12.56□□□□□ -0.4
BBS4-210ENST00000566400 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
BBS4-210ENST00000566400 ZFYVE16Q7Z3T8 1539 aa12.56□□□□□ -0.4
BBS4-210ENST00000566400 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
BBS4-210ENST00000566400 RNF17Q9BXT8 1623 aaKnown RBP12.55□□□□□ -0.4
BBS4-210ENST00000566400 CDCA8Q53HL2 280 aa12.55□□□□□ -0.4
BBS4-210ENST00000566400 RBM19Q9Y4C8 960 aaKnown RBP12.55□□□□□ -0.4
BBS4-210ENST00000566400 PARD3Q8TEW0 1356 aa12.55□□□□□ -0.4
BBS4-210ENST00000566400 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
BBS4-210ENST00000566400 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
BBS4-210ENST00000566400 PTPRTO14522 1441 aa12.53□□□□□ -0.4
BBS4-210ENST00000566400 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
BBS4-210ENST00000566400 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
BBS4-210ENST00000566400 TET3O43151 1660 aa12.53□□□□□ -0.4
BBS4-210ENST00000566400 RNF123Q5XPI4 1314 aa12.53□□□□□ -0.4
BBS4-210ENST00000566400 SCAPERQ9BY12 1400 aa12.52□□□□□ -0.4
BBS4-210ENST00000566400 CEP152O94986 1710 aa12.52□□□□□ -0.41
BBS4-210ENST00000566400 INO80Q9ULG1 1556 aaPredicted RBP12.52□□□□□ -0.41
BBS4-210ENST00000566400 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
BBS4-210ENST00000566400 FANCAO15360 1455 aa12.51□□□□□ -0.41
BBS4-210ENST00000566400 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
BBS4-210ENST00000566400 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
BBS4-210ENST00000566400 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
BBS4-210ENST00000566400 TESK2Q96S53 571 aa12.5□□□□□ -0.41
BBS4-210ENST00000566400 MADDQ8WXG6 1647 aa12.5□□□□□ -0.41
BBS4-210ENST00000566400 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
BBS4-210ENST00000566400 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
BBS4-210ENST00000566400 KIAA1210Q9ULL0 1709 aa12.49□□□□□ -0.41
BBS4-210ENST00000566400 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
BBS4-210ENST00000566400 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
BBS4-210ENST00000566400 ANP32EQ9BTT0 268 aa12.49□□□□□ -0.41
BBS4-210ENST00000566400 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
BBS4-210ENST00000566400 SCAF11Q99590 1463 aaKnown RBP12.48□□□□□ -0.41
BBS4-210ENST00000566400 GLI2P10070 1586 aa12.48□□□□□ -0.41
BBS4-210ENST00000566400 IQGAP1P46940 1657 aa12.47□□□□□ -0.41
BBS4-210ENST00000566400 ADGRL1O94910 1474 aa12.47□□□□□ -0.41
BBS4-210ENST00000566400 CFAP74Q9C0B2 1584 aa12.47□□□□□ -0.41
BBS4-210ENST00000566400 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.41
BBS4-210ENST00000566400 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms