RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 NISCHQ9Y2I1 1504 aa19.6■□□□□ 0.73
BBS4-210ENST00000566400 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
BBS4-210ENST00000566400 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.25
BBS4-210ENST00000566400 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
BBS4-210ENST00000566400 ABCC9O60706 1549 aa16.28■□□□□ 0.2
BBS4-210ENST00000566400 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.2
BBS4-210ENST00000566400 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
BBS4-210ENST00000566400 DCAF8L2P0C7V8 631 aa15.99■□□□□ 0.15
BBS4-210ENST00000566400 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.14
BBS4-210ENST00000566400 CHIC1Q5VXU3 224 aa15.62■□□□□ 0.09
BBS4-210ENST00000566400 NACADO15069 1562 aa15.6■□□□□ 0.09
BBS4-210ENST00000566400 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
BBS4-210ENST00000566400 SCRIBQ14160 1630 aa15.52■□□□□ 0.07
BBS4-210ENST00000566400 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
BBS4-210ENST00000566400 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
BBS4-210ENST00000566400 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
BBS4-210ENST00000566400 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
BBS4-210ENST00000566400 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
BBS4-210ENST00000566400 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
BBS4-210ENST00000566400 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
BBS4-210ENST00000566400 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
BBS4-210ENST00000566400 TRIM41Q8WV44 630 aa15.07■□□□□ 0
BBS4-210ENST00000566400 WIZO95785 1651 aa15.02■□□□□ -0
BBS4-210ENST00000566400 HRCP23327 699 aa15.01□□□□□ -0.01
BBS4-210ENST00000566400 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
BBS4-210ENST00000566400 LOC105371045A0A1W2PR82 267 aa14.99□□□□□ -0.01
BBS4-210ENST00000566400 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
BBS4-210ENST00000566400 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
BBS4-210ENST00000566400 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
BBS4-210ENST00000566400 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
BBS4-210ENST00000566400 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
BBS4-210ENST00000566400 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
BBS4-210ENST00000566400 CC2D2AQ9P2K1 1620 aa14.79□□□□□ -0.04
BBS4-210ENST00000566400 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
BBS4-210ENST00000566400 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
BBS4-210ENST00000566400 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
BBS4-210ENST00000566400 EEA1Q15075 1411 aa14.7□□□□□ -0.06
BBS4-210ENST00000566400 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
BBS4-210ENST00000566400 ABCC8Q09428 1581 aa14.59□□□□□ -0.07
BBS4-210ENST00000566400 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
BBS4-210ENST00000566400 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
BBS4-210ENST00000566400 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
BBS4-210ENST00000566400 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
BBS4-210ENST00000566400 TNIKQ9UKE5 1360 aa14.51□□□□□ -0.09
BBS4-210ENST00000566400 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
BBS4-210ENST00000566400 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
BBS4-210ENST00000566400 SOGA1O94964 1423 aa14.45□□□□□ -0.1
BBS4-210ENST00000566400 EHMT2Q96KQ7 1210 aa14.44□□□□□ -0.1
BBS4-210ENST00000566400 CEP162Q5TB80 1403 aa14.44□□□□□ -0.1
BBS4-210ENST00000566400 PPARGC1BQ86YN6 1023 aaKnown RBP14.43□□□□□ -0.1
BBS4-210ENST00000566400 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
BBS4-210ENST00000566400 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
BBS4-210ENST00000566400 KIF21BO75037 1637 aa14.4□□□□□ -0.1
BBS4-210ENST00000566400 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
BBS4-210ENST00000566400 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
BBS4-210ENST00000566400 CUX2O14529 1486 aa14.35□□□□□ -0.11
BBS4-210ENST00000566400 UBTFP17480 764 aaKnown RBP14.34□□□□□ -0.11
BBS4-210ENST00000566400 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
BBS4-210ENST00000566400 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
BBS4-210ENST00000566400 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
BBS4-210ENST00000566400 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
BBS4-210ENST00000566400 CLIP1P30622 1438 aa14.22□□□□□ -0.13
BBS4-210ENST00000566400 CFTRP13569 1480 aa14.2□□□□□ -0.14
BBS4-210ENST00000566400 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
BBS4-210ENST00000566400 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
BBS4-210ENST00000566400 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
BBS4-210ENST00000566400 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
BBS4-210ENST00000566400 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
BBS4-210ENST00000566400 APLP2Q06481 763 aa14.14□□□□□ -0.15
BBS4-210ENST00000566400 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
BBS4-210ENST00000566400 CUX1P39880 1505 aa14.11□□□□□ -0.15
BBS4-210ENST00000566400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
BBS4-210ENST00000566400 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
BBS4-210ENST00000566400 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
BBS4-210ENST00000566400 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
BBS4-210ENST00000566400 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
BBS4-210ENST00000566400 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
BBS4-210ENST00000566400 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
BBS4-210ENST00000566400 NESP48681 1621 aa13.91□□□□□ -0.18
BBS4-210ENST00000566400 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
BBS4-210ENST00000566400 IGF1RP08069 1367 aa13.9□□□□□ -0.18
BBS4-210ENST00000566400 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
BBS4-210ENST00000566400 MAP3K1Q13233 1512 aa13.89□□□□□ -0.19
BBS4-210ENST00000566400 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
BBS4-210ENST00000566400 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
BBS4-210ENST00000566400 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
BBS4-210ENST00000566400 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
BBS4-210ENST00000566400 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
BBS4-210ENST00000566400 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
BBS4-210ENST00000566400 RRBP1Q9P2E9 1410 aaKnown RBP13.85□□□□□ -0.19
BBS4-210ENST00000566400 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
BBS4-210ENST00000566400 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
BBS4-210ENST00000566400 FHAD1B1AJZ9 1412 aa13.82□□□□□ -0.2
BBS4-210ENST00000566400 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
BBS4-210ENST00000566400 CUL7Q14999 1698 aa13.8□□□□□ -0.2
BBS4-210ENST00000566400 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
BBS4-210ENST00000566400 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
BBS4-210ENST00000566400 EFCAB5A4FU69 1503 aa13.77□□□□□ -0.2
BBS4-210ENST00000566400 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.2
BBS4-210ENST00000566400 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms