RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
PDXDC1-212ENST00000565986 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
PDXDC1-212ENST00000565986 CLTCQ00610 1675 aaKnown RBP19.65■□□□□ 0.74
PDXDC1-212ENST00000565986 PTPRKQ15262 1439 aa19.64■□□□□ 0.73
PDXDC1-212ENST00000565986 C3P01024 1663 aa19.63■□□□□ 0.73
PDXDC1-212ENST00000565986 KDM5DQ9BY66 1539 aa19.63■□□□□ 0.73
PDXDC1-212ENST00000565986 ITGAEP38570 1179 aa19.63■□□□□ 0.73
PDXDC1-212ENST00000565986 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
PDXDC1-212ENST00000565986 ROCK1Q13464 1354 aa19.61■□□□□ 0.73
PDXDC1-212ENST00000565986 MROH1Q8NDA8 1641 aa19.59■□□□□ 0.73
PDXDC1-212ENST00000565986 CEBPAP49715 358 aaPredicted RBP19.59■□□□□ 0.73
PDXDC1-212ENST00000565986 PRDM15P57071 1507 aaPredicted RBP19.58■□□□□ 0.73
PDXDC1-212ENST00000565986 ZC3H13Q5T200 1668 aaKnown RBP19.58■□□□□ 0.72
PDXDC1-212ENST00000565986 DEPDC5O75140 1603 aa19.57■□□□□ 0.72
PDXDC1-212ENST00000565986 ANKRD50Q9ULJ7 1429 aa19.57■□□□□ 0.72
PDXDC1-212ENST00000565986 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
PDXDC1-212ENST00000565986 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
PDXDC1-212ENST00000565986 ABCC3O15438 1527 aa19.56■□□□□ 0.72
PDXDC1-212ENST00000565986 PREX1Q8TCU6 1659 aa19.54■□□□□ 0.72
PDXDC1-212ENST00000565986 NPATQ14207 1427 aa19.53■□□□□ 0.72
PDXDC1-212ENST00000565986 CEP152O94986 1710 aa19.53■□□□□ 0.72
PDXDC1-212ENST00000565986 KANK1Q14678 1352 aa19.52■□□□□ 0.72
PDXDC1-212ENST00000565986 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.72
PDXDC1-212ENST00000565986 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.71
PDXDC1-212ENST00000565986 PZPP20742 1482 aa19.51■□□□□ 0.71
PDXDC1-212ENST00000565986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.713e-9■■■□□ 16.3
PDXDC1-212ENST00000565986 CAMSAP1Q5T5Y3 1602 aa19.5■□□□□ 0.71
PDXDC1-212ENST00000565986 UHRF1BP1Q6BDS2 1440 aa19.5■□□□□ 0.71
PDXDC1-212ENST00000565986 UNC13BO14795 1591 aa19.48■□□□□ 0.71
PDXDC1-212ENST00000565986 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
PDXDC1-212ENST00000565986 VWDEQ8N2E2 1590 aa19.47■□□□□ 0.71
PDXDC1-212ENST00000565986 MYO3AQ8NEV4 1616 aa19.45■□□□□ 0.7
PDXDC1-212ENST00000565986 LMTK2Q8IWU2 1503 aa19.45■□□□□ 0.7
PDXDC1-212ENST00000565986 NAIPQ13075 1403 aa19.44■□□□□ 0.7
PDXDC1-212ENST00000565986 HFM1A2PYH4 1435 aa19.43■□□□□ 0.7
PDXDC1-212ENST00000565986 TNRQ92752 1358 aa19.43■□□□□ 0.7
PDXDC1-212ENST00000565986 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
PDXDC1-212ENST00000565986 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
PDXDC1-212ENST00000565986 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
PDXDC1-212ENST00000565986 FBXO31Q5XUX0 539 aaPredicted RBP19.41■□□□□ 0.7
PDXDC1-212ENST00000565986 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
PDXDC1-212ENST00000565986 SPATA31D1Q6ZQQ2 1576 aa19.4■□□□□ 0.7
PDXDC1-212ENST00000565986 HSPA2P54652 639 aa19.39■□□□□ 0.69
PDXDC1-212ENST00000565986 CEP170BQ9Y4F5 1589 aaPredicted RBP19.39■□□□□ 0.69
PDXDC1-212ENST00000565986 IQGAP3Q86VI3 1631 aa19.39■□□□□ 0.69
PDXDC1-212ENST00000565986 TET3O43151 1660 aa19.39■□□□□ 0.69
PDXDC1-212ENST00000565986 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
PDXDC1-212ENST00000565986 NUP155O75694 1391 aa19.36■□□□□ 0.69
PDXDC1-212ENST00000565986 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
PDXDC1-212ENST00000565986 NLRP1Q9C000 1473 aa19.35■□□□□ 0.69
PDXDC1-212ENST00000565986 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
PDXDC1-212ENST00000565986 E9PCH4 1651 aa19.3■□□□□ 0.68
PDXDC1-212ENST00000565986 SYNMO15061 1565 aa19.28■□□□□ 0.68
PDXDC1-212ENST00000565986 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
PDXDC1-212ENST00000565986 NOS1P29475 1434 aa19.28■□□□□ 0.68
PDXDC1-212ENST00000565986 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
PDXDC1-212ENST00000565986 PLA2R1Q13018 1463 aa19.27■□□□□ 0.67
PDXDC1-212ENST00000565986 STRCQ7RTU9 1775 aa19.26■□□□□ 0.67
PDXDC1-212ENST00000565986 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
PDXDC1-212ENST00000565986 UBR1Q8IWV7 1749 aa19.23■□□□□ 0.67
PDXDC1-212ENST00000565986 PIK3C2BO00750 1634 aa19.23■□□□□ 0.67
PDXDC1-212ENST00000565986 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
PDXDC1-212ENST00000565986 POLR1AO95602 1720 aaPredicted RBP19.2■□□□□ 0.66
PDXDC1-212ENST00000565986 SPHKAPQ2M3C7 1700 aa19.2■□□□□ 0.66
PDXDC1-212ENST00000565986 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
PDXDC1-212ENST00000565986 KDM5AP29375 1690 aaKnown RBP19.2■□□□□ 0.66
PDXDC1-212ENST00000565986 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
PDXDC1-212ENST00000565986 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
PDXDC1-212ENST00000565986 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
PDXDC1-212ENST00000565986 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
PDXDC1-212ENST00000565986 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
PDXDC1-212ENST00000565986 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
PDXDC1-212ENST00000565986 PKD2Q13563 968 aa19.18■□□□□ 0.66
PDXDC1-212ENST00000565986 IDI1Q13907 227 aa19.18■□□□□ 0.66
PDXDC1-212ENST00000565986 NCKAP5LQ9HCH0 1330 aa19.17■□□□□ 0.66
PDXDC1-212ENST00000565986 PTPRTO14522 1441 aa19.17■□□□□ 0.66
PDXDC1-212ENST00000565986 ANKLE2Q86XL3 938 aa19.14■□□□□ 0.65
PDXDC1-212ENST00000565986 SLIT1O75093 1534 aa19.14■□□□□ 0.65
PDXDC1-212ENST00000565986 TRPM2O94759 1503 aa19.14■□□□□ 0.65
PDXDC1-212ENST00000565986 NEURL4Q96JN8 1562 aa19.14■□□□□ 0.65
PDXDC1-212ENST00000565986 ARHGAP23Q9P227 1491 aa19.13■□□□□ 0.65
PDXDC1-212ENST00000565986 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
PDXDC1-212ENST00000565986 SCAF11Q99590 1463 aaKnown RBP19.11■□□□□ 0.65
PDXDC1-212ENST00000565986 TMEM2Q9UHN6 1383 aa19.11■□□□□ 0.65
PDXDC1-212ENST00000565986 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
PDXDC1-212ENST00000565986 MPHOSPH9Q99550 1183 aa19.1■□□□□ 0.65
PDXDC1-212ENST00000565986 CLTCL1P53675 1640 aa19.1■□□□□ 0.65
PDXDC1-212ENST00000565986 CHGAP10645 457 aaKnown RBP19.09■□□□□ 0.65
PDXDC1-212ENST00000565986 EID1Q9Y6B2 187 aa19.09■□□□□ 0.65
PDXDC1-212ENST00000565986 MED14O60244 1454 aa19.09■□□□□ 0.65
PDXDC1-212ENST00000565986 NPHP4O75161 1426 aaPredicted RBP19.08■□□□□ 0.65
PDXDC1-212ENST00000565986 IQGAP1P46940 1657 aa19.08■□□□□ 0.65
PDXDC1-212ENST00000565986 HRCP23327 699 aa19.06■□□□□ 0.64
PDXDC1-212ENST00000565986 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
PDXDC1-212ENST00000565986 FOXD1Q16676 465 aa19.05■□□□□ 0.64
PDXDC1-212ENST00000565986 LTKP29376 864 aa19.04■□□□□ 0.64
PDXDC1-212ENST00000565986 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
PDXDC1-212ENST00000565986 KIF1BO60333 1816 aa19.04■□□□□ 0.64
PDXDC1-212ENST00000565986 ZFYVE9O95405 1425 aa19.03■□□□□ 0.64
PDXDC1-212ENST00000565986 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms