RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0
CNOT1-207ENST00000565605 SAMD9LQ8IVG5 1584 aa15.07■□□□□ 0
CNOT1-207ENST00000565605 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
CNOT1-207ENST00000565605 KANK4Q5T7N3 995 aaPredicted RBP15.07■□□□□ 0
CNOT1-207ENST00000565605 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
CNOT1-207ENST00000565605 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
CNOT1-207ENST00000565605 ZMYM3Q14202 1370 aa15.07■□□□□ 0
CNOT1-207ENST00000565605 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
CNOT1-207ENST00000565605 NPATQ14207 1427 aa15.05■□□□□ -0
CNOT1-207ENST00000565605 SYCP2Q9BX26 1530 aa15.05■□□□□ -0
CNOT1-207ENST00000565605 CAMSAP1Q5T5Y3 1602 aa15.05■□□□□ -0
CNOT1-207ENST00000565605 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
CNOT1-207ENST00000565605 SPAG9O60271 1321 aaKnown RBP15.04■□□□□ -0
CNOT1-207ENST00000565605 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
CNOT1-207ENST00000565605 ZNF335Q9H4Z2 1342 aaPredicted RBP15.03■□□□□ -0
CNOT1-207ENST00000565605 IQSEC2Q5JU85 1478 aa15.02■□□□□ -0
CNOT1-207ENST00000565605 MROH2AA6NES4 1674 aa15□□□□□ -0.01
CNOT1-207ENST00000565605 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
CNOT1-207ENST00000565605 GGT6Q6P531 493 aa14.99□□□□□ -0.01
CNOT1-207ENST00000565605 CAMSAP2Q08AD1 1489 aa14.99□□□□□ -0.01
CNOT1-207ENST00000565605 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
CNOT1-207ENST00000565605 MYOM3Q5VTT5 1437 aa14.99□□□□□ -0.01
CNOT1-207ENST00000565605 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
CNOT1-207ENST00000565605 A2MP01023 1474 aa14.98□□□□□ -0.01
CNOT1-207ENST00000565605 UBAP1LF5GYI3 381 aa14.98□□□□□ -0.01
CNOT1-207ENST00000565605 PLXNC1O60486 1568 aa14.98□□□□□ -0.01
CNOT1-207ENST00000565605 CLTCQ00610 1675 aaKnown RBP14.97□□□□□ -0.01
CNOT1-207ENST00000565605 POLA2Q14181 598 aa14.97□□□□□ -0.01
CNOT1-207ENST00000565605 MIA2Q96PC5 1412 aa14.97□□□□□ -0.01
CNOT1-207ENST00000565605 PKD2Q13563 968 aa14.96□□□□□ -0.01
CNOT1-207ENST00000565605 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
CNOT1-207ENST00000565605 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
CNOT1-207ENST00000565605 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
CNOT1-207ENST00000565605 INO80Q9ULG1 1556 aaPredicted RBP14.95□□□□□ -0.02
CNOT1-207ENST00000565605 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
CNOT1-207ENST00000565605 CEP170BQ9Y4F5 1589 aaPredicted RBP14.94□□□□□ -0.02
CNOT1-207ENST00000565605 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
CNOT1-207ENST00000565605 CCDC141Q6ZP82 1450 aa14.94□□□□□ -0.02
CNOT1-207ENST00000565605 ZNF142P52746 1687 aaPredicted RBP14.93□□□□□ -0.02
CNOT1-207ENST00000565605 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
CNOT1-207ENST00000565605 FBXO31Q5XUX0 539 aaPredicted RBP14.9□□□□□ -0.02
CNOT1-207ENST00000565605 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
CNOT1-207ENST00000565605 TSPY4P0CV99 314 aa14.89□□□□□ -0.03
CNOT1-207ENST00000565605 TSPY10P0CW01 314 aa14.89□□□□□ -0.03
CNOT1-207ENST00000565605 FGD6Q6ZV73 1430 aa14.89□□□□□ -0.03
CNOT1-207ENST00000565605 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
CNOT1-207ENST00000565605 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
CNOT1-207ENST00000565605 HAX1O00165 279 aa14.87□□□□□ -0.03
CNOT1-207ENST00000565605 HSPA1LP34931 641 aa14.87□□□□□ -0.03
CNOT1-207ENST00000565605 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
CNOT1-207ENST00000565605 DHX29Q7Z478 1369 aaKnown RBP14.86□□□□□ -0.03
CNOT1-207ENST00000565605 PIP4K2BP78356 416 aa14.86□□□□□ -0.03
CNOT1-207ENST00000565605 ADGBQ8N7X0 1667 aa14.86□□□□□ -0.03
CNOT1-207ENST00000565605 KIF3BO15066 747 aa14.84□□□□□ -0.03
CNOT1-207ENST00000565605 TNRQ92752 1358 aa14.84□□□□□ -0.03
CNOT1-207ENST00000565605 NEURL4Q96JN8 1562 aa14.83□□□□□ -0.04
CNOT1-207ENST00000565605 MAST1Q9Y2H9 1570 aa14.83□□□□□ -0.04
CNOT1-207ENST00000565605 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
CNOT1-207ENST00000565605 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
CNOT1-207ENST00000565605 PIP4P2Q8N4L2 257 aa14.81□□□□□ -0.04
CNOT1-207ENST00000565605 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
CNOT1-207ENST00000565605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.043e-6■□□□□ 9.8
CNOT1-207ENST00000565605 ABCC5O15440 1437 aa14.81□□□□□ -0.04
CNOT1-207ENST00000565605 DAPK1P53355 1430 aa14.81□□□□□ -0.04
CNOT1-207ENST00000565605 TOM1O60784 492 aa14.8□□□□□ -0.04
CNOT1-207ENST00000565605 FAM50AQ14320 339 aaKnown RBP14.8□□□□□ -0.04
CNOT1-207ENST00000565605 WASHC2CQ9Y4E1 1318 aa14.8□□□□□ -0.04
CNOT1-207ENST00000565605 PZPP20742 1482 aa14.8□□□□□ -0.04
CNOT1-207ENST00000565605 CPS1P31327 1500 aa14.79□□□□□ -0.04
CNOT1-207ENST00000565605 ANKLE2Q86XL3 938 aa14.79□□□□□ -0.04
CNOT1-207ENST00000565605 MED1Q15648 1581 aaPredicted RBP14.78□□□□□ -0.04
CNOT1-207ENST00000565605 KDM5DQ9BY66 1539 aa14.78□□□□□ -0.04
CNOT1-207ENST00000565605 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.04
CNOT1-207ENST00000565605 VWDEQ8N2E2 1590 aa14.77□□□□□ -0.04
CNOT1-207ENST00000565605 THEMISQ8N1K5 641 aaPredicted RBP14.77□□□□□ -0.05
CNOT1-207ENST00000565605 POLR1AO95602 1720 aaPredicted RBP14.77□□□□□ -0.05
CNOT1-207ENST00000565605 ALKQ9UM73 1620 aa14.77□□□□□ -0.05
CNOT1-207ENST00000565605 KCNA4P22459 653 aa14.75□□□□□ -0.05
CNOT1-207ENST00000565605 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
CNOT1-207ENST00000565605 DUOX2Q9NRD8 1548 aa14.74□□□□□ -0.05
CNOT1-207ENST00000565605 MED14O60244 1454 aa14.74□□□□□ -0.05
CNOT1-207ENST00000565605 NLRP1Q9C000 1473 aa14.74□□□□□ -0.05
CNOT1-207ENST00000565605 ANKRD30AQ9BXX3 1397 aa14.73□□□□□ -0.05
CNOT1-207ENST00000565605 KIF15Q9NS87 1388 aa14.73□□□□□ -0.05
CNOT1-207ENST00000565605 UGGT1Q9NYU2 1555 aa14.73□□□□□ -0.05
CNOT1-207ENST00000565605 RRP7BPQ9NSQ0 103 aa14.73□□□□□ -0.05
CNOT1-207ENST00000565605 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
CNOT1-207ENST00000565605 FAM135AQ9P2D6 1515 aa14.72□□□□□ -0.05
CNOT1-207ENST00000565605 ERBINQ96RT1 1412 aa14.71□□□□□ -0.05
CNOT1-207ENST00000565605 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
CNOT1-207ENST00000565605 EIF2AK4Q9P2K8 1649 aaKnown RBP14.7□□□□□ -0.06
CNOT1-207ENST00000565605 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
CNOT1-207ENST00000565605 ADGRL2O95490 1459 aa14.69□□□□□ -0.06
CNOT1-207ENST00000565605 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
CNOT1-207ENST00000565605 STRCP1A6NGW2 1772 aa14.68□□□□□ -0.06
CNOT1-207ENST00000565605 ABCC3O15438 1527 aa14.68□□□□□ -0.06
CNOT1-207ENST00000565605 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
CNOT1-207ENST00000565605 RRBP1Q9P2E9 1410 aaKnown RBP14.66□□□□□ -0.06
CNOT1-207ENST00000565605 RNF17Q9BXT8 1623 aaKnown RBP14.66□□□□□ -0.06
CNOT1-207ENST00000565605 ERVK-7P63135 1459 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms