RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 NPATQ14207 1427 aa30.66■■■□□ 2.5
CMTM3-207ENST00000564060 KDM5DQ9BY66 1539 aa30.66■■■□□ 2.5
CMTM3-207ENST00000564060 ZC3H13Q5T200 1668 aaKnown RBP30.63■■■□□ 2.49
CMTM3-207ENST00000564060 KIF15Q9NS87 1388 aa30.62■■■□□ 2.49
CMTM3-207ENST00000564060 FAM50AQ14320 339 aaKnown RBP30.61■■■□□ 2.49
CMTM3-207ENST00000564060 ERBINQ96RT1 1412 aa30.6■■■□□ 2.49
CMTM3-207ENST00000564060 ANKRD30AQ9BXX3 1397 aa30.59■■■□□ 2.49
CMTM3-207ENST00000564060 WASHC2CQ9Y4E1 1318 aa30.56■■■□□ 2.48
CMTM3-207ENST00000564060 HSPA2P54652 639 aa30.55■■■□□ 2.48
CMTM3-207ENST00000564060 ADGRL2O95490 1459 aa30.55■■■□□ 2.48
CMTM3-207ENST00000564060 PTPRKQ15262 1439 aa30.55■■■□□ 2.48
CMTM3-207ENST00000564060 RRP7BPQ9NSQ0 103 aa30.53■■■□□ 2.48
CMTM3-207ENST00000564060 MYO3AQ8NEV4 1616 aa30.53■■■□□ 2.48
CMTM3-207ENST00000564060 MROH1Q8NDA8 1641 aa30.52■■■□□ 2.48
CMTM3-207ENST00000564060 ZNF142P52746 1687 aaPredicted RBP30.52■■■□□ 2.48
CMTM3-207ENST00000564060 NCOA1Q15788 1441 aa30.51■■■□□ 2.47
CMTM3-207ENST00000564060 PZPP20742 1482 aa30.5■■■□□ 2.47
CMTM3-207ENST00000564060 DEPDC5O75140 1603 aa30.5■■■□□ 2.47
CMTM3-207ENST00000564060 CEP152O94986 1710 aa30.5■■■□□ 2.47
CMTM3-207ENST00000564060 ABCC3O15438 1527 aa30.49■■■□□ 2.47
CMTM3-207ENST00000564060 PRDM15P57071 1507 aaPredicted RBP30.49■■■□□ 2.47
CMTM3-207ENST00000564060 CHIC2Q9UKJ5 165 aa30.49■■■□□ 2.47
CMTM3-207ENST00000564060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.47■■■□□ 2.47
CMTM3-207ENST00000564060 PPARGC1BQ86YN6 1023 aaKnown RBP30.46■■■□□ 2.47
CMTM3-207ENST00000564060 CAMSAP1Q5T5Y3 1602 aa30.45■■■□□ 2.47
CMTM3-207ENST00000564060 CEP170BQ9Y4F5 1589 aaPredicted RBP30.45■■■□□ 2.46
CMTM3-207ENST00000564060 STRCQ7RTU9 1775 aa30.43■■■□□ 2.46
CMTM3-207ENST00000564060 KANK1Q14678 1352 aa30.4■■■□□ 2.46
CMTM3-207ENST00000564060 TNRQ92752 1358 aa30.38■■■□□ 2.45
CMTM3-207ENST00000564060 ROCK1Q13464 1354 aa30.37■■■□□ 2.45
CMTM3-207ENST00000564060 ANKRD50Q9ULJ7 1429 aa30.36■■■□□ 2.45
CMTM3-207ENST00000564060 A2ML1A8K2U0 1454 aa30.36■■■□□ 2.45
CMTM3-207ENST00000564060 DMRT2Q9Y5R5 561 aa30.35■■■□□ 2.45
CMTM3-207ENST00000564060 RRBP1Q9P2E9 1410 aaKnown RBP30.35■■■□□ 2.45
CMTM3-207ENST00000564060 CFAP65Q6ZU64 1925 aaKnown RBP30.35■■■□□ 2.45
CMTM3-207ENST00000564060 SPATA31D1Q6ZQQ2 1576 aa30.34■■■□□ 2.45
CMTM3-207ENST00000564060 NLRP1Q9C000 1473 aa30.32■■■□□ 2.44
CMTM3-207ENST00000564060 FBXO31Q5XUX0 539 aaPredicted RBP30.32■■■□□ 2.44
CMTM3-207ENST00000564060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.31■■■□□ 2.44
CMTM3-207ENST00000564060 VWDEQ8N2E2 1590 aa30.31■■■□□ 2.44
CMTM3-207ENST00000564060 PLA2R1Q13018 1463 aa30.31■■■□□ 2.44
CMTM3-207ENST00000564060 ARHGAP31Q2M1Z3 1444 aa30.3■■■□□ 2.44
CMTM3-207ENST00000564060 LMTK2Q8IWU2 1503 aa30.3■■■□□ 2.44
CMTM3-207ENST00000564060 ERVK-7P63135 1459 aa30.29■■■□□ 2.44
CMTM3-207ENST00000564060 UNC13BO14795 1591 aa30.25■■■□□ 2.43
CMTM3-207ENST00000564060 PTPRTO14522 1441 aa30.25■■■□□ 2.43
CMTM3-207ENST00000564060 ITGAEP38570 1179 aa30.25■■■□□ 2.43
CMTM3-207ENST00000564060 POLR1AO95602 1720 aaPredicted RBP30.23■■■□□ 2.43
CMTM3-207ENST00000564060 UGGT1Q9NYU2 1555 aa30.22■■■□□ 2.43
CMTM3-207ENST00000564060 EFCAB6Q5THR3 1501 aa30.22■■■□□ 2.43
CMTM3-207ENST00000564060 PKD2Q13563 968 aa30.19■■■□□ 2.42
CMTM3-207ENST00000564060 TET3O43151 1660 aa30.19■■■□□ 2.42
CMTM3-207ENST00000564060 GCC2Q8IWJ2 1684 aa30.19■■■□□ 2.42
CMTM3-207ENST00000564060 THEMISQ8N1K5 641 aaPredicted RBP30.16■■■□□ 2.42
CMTM3-207ENST00000564060 RPRD2Q5VT52 1461 aaKnown RBP30.14■■■□□ 2.42
CMTM3-207ENST00000564060 IQGAP3Q86VI3 1631 aa30.14■■■□□ 2.41
CMTM3-207ENST00000564060 UBR1Q8IWV7 1749 aa30.13■■■□□ 2.41
CMTM3-207ENST00000564060 NCKAP5LQ9HCH0 1330 aa30.11■■■□□ 2.41
CMTM3-207ENST00000564060 KDM5AP29375 1690 aaKnown RBP30.1■■■□□ 2.41
CMTM3-207ENST00000564060 PIK3C2BO00750 1634 aa30.07■■■□□ 2.4
CMTM3-207ENST00000564060 NOS1P29475 1434 aa30.05■■■□□ 2.4
CMTM3-207ENST00000564060 ANKLE2Q86XL3 938 aa30.05■■■□□ 2.4
CMTM3-207ENST00000564060 SYNMO15061 1565 aa30.05■■■□□ 2.4
CMTM3-207ENST00000564060 NEURL4Q96JN8 1562 aa30.04■■■□□ 2.4
CMTM3-207ENST00000564060 E9PCH4 1651 aa30.04■■■□□ 2.4
CMTM3-207ENST00000564060 NUP155O75694 1391 aa30.02■■■□□ 2.4
CMTM3-207ENST00000564060 NAIPQ13075 1403 aa30.01■■■□□ 2.39
CMTM3-207ENST00000564060 CERKQ8TCT0 537 aa29.99■■■□□ 2.39
CMTM3-207ENST00000564060 MED14O60244 1454 aa29.99■■■□□ 2.39
CMTM3-207ENST00000564060 IQGAP1P46940 1657 aa29.98■■■□□ 2.39
CMTM3-207ENST00000564060 HFM1A2PYH4 1435 aa29.98■■■□□ 2.39
CMTM3-207ENST00000564060 SLIT1O75093 1534 aa29.97■■■□□ 2.39
CMTM3-207ENST00000564060 ILDR1Q86SU0 546 aaPredicted RBP29.97■■■□□ 2.39
CMTM3-207ENST00000564060 SLC52A1Q9NWF4 448 aa29.97■■■□□ 2.39
CMTM3-207ENST00000564060 STAG3Q9UJ98 1225 aa29.97■■■□□ 2.39
CMTM3-207ENST00000564060 FBXO41Q8TF61 875 aa29.96■■■□□ 2.39
CMTM3-207ENST00000564060 LTBP4Q8N2S1 1624 aa29.96■■■□□ 2.39
CMTM3-207ENST00000564060 ADGRB3O60242 1522 aa29.96■■■□□ 2.39
CMTM3-207ENST00000564060 ARHGAP23Q9P227 1491 aa29.94■■■□□ 2.38
CMTM3-207ENST00000564060 NPHP4O75161 1426 aaPredicted RBP29.94■■■□□ 2.38
CMTM3-207ENST00000564060 IDI1Q13907 227 aa29.92■■■□□ 2.38
CMTM3-207ENST00000564060 SCAF11Q99590 1463 aaKnown RBP29.92■■■□□ 2.38
CMTM3-207ENST00000564060 IQSEC2Q5JU85 1478 aa29.89■■■□□ 2.38
CMTM3-207ENST00000564060 SPHKAPQ2M3C7 1700 aa29.89■■■□□ 2.38
CMTM3-207ENST00000564060 MYO5BQ9ULV0 1848 aa29.88■■■□□ 2.37
CMTM3-207ENST00000564060 EID1Q9Y6B2 187 aa29.88■■■□□ 2.37
CMTM3-207ENST00000564060 TMEM2Q9UHN6 1383 aa29.88■■■□□ 2.37
CMTM3-207ENST00000564060 ZNF335Q9H4Z2 1342 aaPredicted RBP29.86■■■□□ 2.37
CMTM3-207ENST00000564060 TMEM131LA2VDJ0 1609 aa29.83■■■□□ 2.37
CMTM3-207ENST00000564060 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
CMTM3-207ENST00000564060 CPS1P31327 1500 aa29.81■■■□□ 2.36
CMTM3-207ENST00000564060 LTKP29376 864 aa29.78■■■□□ 2.36
CMTM3-207ENST00000564060 TRIM52Q96A61 297 aa29.77■■■□□ 2.36
CMTM3-207ENST00000564060 ACIN1Q9UKV3 1341 aaKnown RBP29.74■■■□□ 2.35
CMTM3-207ENST00000564060 HDGFP51858 240 aaKnown RBP29.74■■■□□ 2.35
CMTM3-207ENST00000564060 TRPM2O94759 1503 aa29.72■■■□□ 2.35
CMTM3-207ENST00000564060 CHGAP10645 457 aaKnown RBP29.71■■■□□ 2.35
CMTM3-207ENST00000564060 KIF1BO60333 1816 aa29.71■■■□□ 2.35
CMTM3-207ENST00000564060 ZFYVE9O95405 1425 aa29.7■■■□□ 2.34
CMTM3-207ENST00000564060 RIMS2Q9UQ26 1411 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms