RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 GPATCH8Q9UKJ3 1502 aaKnown RBP29.9■■■□□ 2.38
E4F1-203ENST00000563643 NPHP4O75161 1426 aaPredicted RBP29.88■■■□□ 2.37
E4F1-203ENST00000563643 FBXO31Q5XUX0 539 aaPredicted RBP29.87■■■□□ 2.37
E4F1-203ENST00000563643 CASKIN1Q8WXD9 1431 aa29.87■■■□□ 2.37
E4F1-203ENST00000563643 MED14O60244 1454 aa29.87■■■□□ 2.37
E4F1-203ENST00000563643 PLEKHH2Q8IVE3 1493 aa29.87■■■□□ 2.37
E4F1-203ENST00000563643 RNF17Q9BXT8 1623 aaKnown RBP29.85■■■□□ 2.37
E4F1-203ENST00000563643 LRRC7Q96NW7 1537 aa29.84■■■□□ 2.37
E4F1-203ENST00000563643 ADGBQ8N7X0 1667 aa29.84■■■□□ 2.37
E4F1-203ENST00000563643 DEPDC5O75140 1603 aa29.82■■■□□ 2.36
E4F1-203ENST00000563643 THEMISQ8N1K5 641 aaPredicted RBP29.82■■■□□ 2.36
E4F1-203ENST00000563643 PZPP20742 1482 aa29.81■■■□□ 2.36
E4F1-203ENST00000563643 SYNMO15061 1565 aa29.79■■■□□ 2.36
E4F1-203ENST00000563643 CFDP1Q9UEE9 299 aaPredicted RBP29.78■■■□□ 2.36
E4F1-203ENST00000563643 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
E4F1-203ENST00000563643 IQGAP1P46940 1657 aa29.77■■■□□ 2.36
E4F1-203ENST00000563643 STRCP1A6NGW2 1772 aa29.77■■■□□ 2.36
E4F1-203ENST00000563643 FAM135AQ9P2D6 1515 aa29.76■■■□□ 2.36
E4F1-203ENST00000563643 NLRP1Q9C000 1473 aa29.76■■■□□ 2.35
E4F1-203ENST00000563643 KDM5DQ9BY66 1539 aa29.75■■■□□ 2.35
E4F1-203ENST00000563643 POTEAQ6S8J7 498 aa29.74■■■□□ 2.35
E4F1-203ENST00000563643 MIA2Q96PC5 1412 aa29.72■■■□□ 2.35
E4F1-203ENST00000563643 DHX29Q7Z478 1369 aaKnown RBP29.71■■■□□ 2.35
E4F1-203ENST00000563643 FYCO1Q9BQS8 1478 aa29.69■■■□□ 2.34
E4F1-203ENST00000563643 CCNB3Q8WWL7 1395 aa29.69■■■□□ 2.34
E4F1-203ENST00000563643 RTEL1-TNFRSF6BF6WH68 1400 aa29.66■■■□□ 2.34
E4F1-203ENST00000563643 KIF3BO15066 747 aa29.66■■■□□ 2.34
E4F1-203ENST00000563643 WASHC2CQ9Y4E1 1318 aa29.66■■■□□ 2.34
E4F1-203ENST00000563643 MBD5Q9P267 1494 aa29.63■■■□□ 2.33
E4F1-203ENST00000563643 ZNF644Q9H582 1327 aaPredicted RBP29.62■■■□□ 2.33
E4F1-203ENST00000563643 SETD1AO15047 1707 aaKnown RBP29.58■■■□□ 2.33
E4F1-203ENST00000563643 ZC3H13Q5T200 1668 aaKnown RBP29.57■■■□□ 2.32
E4F1-203ENST00000563643 FAM135BQ49AJ0 1406 aa29.56■■■□□ 2.32
E4F1-203ENST00000563643 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.31
E4F1-203ENST00000563643 TIAM1Q13009 1591 aa29.5■■■□□ 2.31
E4F1-203ENST00000563643 XIRP1Q702N8 1843 aaKnown RBP29.5■■■□□ 2.31
E4F1-203ENST00000563643 MTUS2Q5JR59 1369 aa29.49■■■□□ 2.31
E4F1-203ENST00000563643 SCAF11Q99590 1463 aaKnown RBP29.48■■■□□ 2.31
E4F1-203ENST00000563643 CCDC141Q6ZP82 1450 aa29.44■■■□□ 2.3
E4F1-203ENST00000563643 ERVK-7P63135 1459 aa29.43■■■□□ 2.3
E4F1-203ENST00000563643 ROBO1Q9Y6N7 1651 aa29.4■■■□□ 2.3
E4F1-203ENST00000563643 ABCC3O15438 1527 aa29.4■■■□□ 2.3
E4F1-203ENST00000563643 UBR1Q8IWV7 1749 aa29.4■■■□□ 2.3
E4F1-203ENST00000563643 LTKP29376 864 aa29.39■■■□□ 2.3
E4F1-203ENST00000563643 NCOA2Q15596 1464 aa29.38■■■□□ 2.29
E4F1-203ENST00000563643 SRCAPQ6ZRS2 3230 aa29.38■■■□□ 2.29
E4F1-203ENST00000563643 ARHGAP23Q9P227 1491 aa29.37■■■□□ 2.29
E4F1-203ENST00000563643 UPF1Q92900 1129 aaKnown RBP eCLIP29.37■■■□□ 2.29
E4F1-203ENST00000563643 TMEM94Q12767 1356 aa29.37■■■□□ 2.29
E4F1-203ENST00000563643 TXNDC2Q86VQ3 553 aa29.36■■■□□ 2.29
E4F1-203ENST00000563643 SLIT1O75093 1534 aa29.35■■■□□ 2.29
E4F1-203ENST00000563643 EHBP1L1Q8N3D4 1523 aa29.32■■■□□ 2.28
E4F1-203ENST00000563643 CAMSAP2Q08AD1 1489 aa29.32■■■□□ 2.28
E4F1-203ENST00000563643 LRRC9Q6ZRR7 1453 aa29.31■■■□□ 2.28
E4F1-203ENST00000563643 MAP3K1Q13233 1512 aa29.3■■■□□ 2.28
E4F1-203ENST00000563643 RSPH4AQ5TD94 716 aa29.3■■■□□ 2.28
E4F1-203ENST00000563643 CEP162Q5TB80 1403 aa29.29■■■□□ 2.28
E4F1-203ENST00000563643 JCADQ9P266 1359 aa29.28■■■□□ 2.28
E4F1-203ENST00000563643 EID1Q9Y6B2 187 aa29.28■■■□□ 2.28
E4F1-203ENST00000563643 RBM33Q96EV2 1170 aaKnown RBP29.23■■■□□ 2.27
E4F1-203ENST00000563643 PHLPP1O60346 1717 aa29.23■■■□□ 2.27
E4F1-203ENST00000563643 TRIM52Q96A61 297 aa29.22■■■□□ 2.27
E4F1-203ENST00000563643 MROH1Q8NDA8 1641 aa29.22■■■□□ 2.27
E4F1-203ENST00000563643 ARHGEF5Q12774 1597 aa29.22■■■□□ 2.27
E4F1-203ENST00000563643 TSPY4P0CV99 314 aa29.21■■■□□ 2.27
E4F1-203ENST00000563643 TSPY10P0CW01 314 aa29.21■■■□□ 2.27
E4F1-203ENST00000563643 KCNA6P17658 529 aa29.21■■■□□ 2.27
E4F1-203ENST00000563643 PROSER2Q86WR7 435 aaPredicted RBP29.2■■■□□ 2.26
E4F1-203ENST00000563643 TMEM2Q9UHN6 1383 aa29.19■■■□□ 2.26
E4F1-203ENST00000563643 PRDM15P57071 1507 aaPredicted RBP29.19■■■□□ 2.26
E4F1-203ENST00000563643 ZNF772Q68DY9 489 aaPredicted RBP29.18■■■□□ 2.26
E4F1-203ENST00000563643 LRP6O75581 1613 aa29.18■■■□□ 2.26
E4F1-203ENST00000563643 EIF2AK4Q9P2K8 1649 aaKnown RBP29.18■■■□□ 2.26
E4F1-203ENST00000563643 CEP152O94986 1710 aa29.17■■■□□ 2.26
E4F1-203ENST00000563643 SLAIN2Q9P270 581 aa29.15■■■□□ 2.26
E4F1-203ENST00000563643 MSH6P52701 1360 aa29.14■■■□□ 2.26
E4F1-203ENST00000563643 NKTRP30414 1462 aaKnown RBP29.14■■■□□ 2.26
E4F1-203ENST00000563643 CFAP65Q6ZU64 1925 aaKnown RBP29.14■■■□□ 2.25
E4F1-203ENST00000563643 COL16A1Q07092 1604 aaPredicted RBP29.13■■■□□ 2.25
E4F1-203ENST00000563643 MEX3CQ5U5Q3 659 aaKnown RBP29.13■■■□□ 2.25
E4F1-203ENST00000563643 SLC26A8Q96RN1 970 aa29.12■■■□□ 2.25
E4F1-203ENST00000563643 SPATA31A6Q5VVP1 1343 aa29.12■■■□□ 2.25
E4F1-203ENST00000563643 PIK3C2BO00750 1634 aa29.12■■■□□ 2.25
E4F1-203ENST00000563643 ARHGAP31Q2M1Z3 1444 aa29.11■■■□□ 2.25
E4F1-203ENST00000563643 NWD1Q149M9 1564 aa29.1■■■□□ 2.25
E4F1-203ENST00000563643 MAST1Q9Y2H9 1570 aa29.09■■■□□ 2.25
E4F1-203ENST00000563643 TET3O43151 1660 aa29.09■■■□□ 2.25
E4F1-203ENST00000563643 FGD6Q6ZV73 1430 aa29.08■■■□□ 2.25
E4F1-203ENST00000563643 STAG3Q9UJ98 1225 aa29.07■■■□□ 2.24
E4F1-203ENST00000563643 EFCAB6Q5THR3 1501 aa29.06■■■□□ 2.24
E4F1-203ENST00000563643 RXRBP28702 533 aa29.06■■■□□ 2.24
E4F1-203ENST00000563643 CDK12Q9NYV4 1490 aaPredicted RBP29.04■■■□□ 2.24
E4F1-203ENST00000563643 KDM5AP29375 1690 aaKnown RBP29.01■■■□□ 2.23
E4F1-203ENST00000563643 DUOX2Q9NRD8 1548 aa28.97■■■□□ 2.23
E4F1-203ENST00000563643 SHPRHQ149N8 1683 aa28.96■■■□□ 2.23
E4F1-203ENST00000563643 IDI1Q13907 227 aa28.95■■■□□ 2.22
E4F1-203ENST00000563643 AHDC1Q5TGY3 1603 aaPredicted RBP28.94■■■□□ 2.22
E4F1-203ENST00000563643 BCANQ96GW7 911 aa28.91■■■□□ 2.22
E4F1-203ENST00000563643 ADGRB3O60242 1522 aa28.88■■■□□ 2.21
E4F1-203ENST00000563643 RGS12O14924 1447 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms