RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 NISCHQ9Y2I1 1504 aa46.73■■■■■ 5.07
E4F1-203ENST00000563643 ABCC9O60706 1549 aa43.55■■■■■ 4.56
E4F1-203ENST00000563643 CCDC180Q9P1Z9 1646 aa42.39■■■■■ 4.38
E4F1-203ENST00000563643 DNAJC5BQ9UF47 199 aa41.86■■■■■ 4.29
E4F1-203ENST00000563643 RB1CC1Q8TDY2 1594 aa40.93■■■■■ 4.14
E4F1-203ENST00000563643 NACADO15069 1562 aa40.37■■■■■ 4.05
E4F1-203ENST00000563643 PABPN1Q86U42 306 aaKnown RBP eCLIP40.36■■■■■ 4.05
E4F1-203ENST00000563643 UNC13AQ9UPW8 1703 aa39.94■■■■□ 3.98
E4F1-203ENST00000563643 DCAF8L2P0C7V8 631 aa39.91■■■■□ 3.98
E4F1-203ENST00000563643 BICRAQ9NZM4 1560 aa39.8■■■■□ 3.96
E4F1-203ENST00000563643 MYO15BQ96JP2 1530 aa39.45■■■■□ 3.91
E4F1-203ENST00000563643 CECR2Q9BXF3 1484 aa39.36■■■■□ 3.89
E4F1-203ENST00000563643 DNAJC5Q9H3Z4 198 aa39.27■■■■□ 3.88
E4F1-203ENST00000563643 CC2D2AQ9P2K1 1620 aa39.25■■■■□ 3.87
E4F1-203ENST00000563643 SHROOM4Q9ULL8 1493 aa39.16■■■■□ 3.86
E4F1-203ENST00000563643 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
E4F1-203ENST00000563643 SCRIBQ14160 1630 aa38.59■■■■□ 3.77
E4F1-203ENST00000563643 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
E4F1-203ENST00000563643 ZCCHC6Q5VYS8 1495 aaKnown RBP38.5■■■■□ 3.75
E4F1-203ENST00000563643 CUX2O14529 1486 aa38.01■■■■□ 3.67
E4F1-203ENST00000563643 ERCC6Q03468 1493 aa37.69■■■■□ 3.62
E4F1-203ENST00000563643 NCAPD3P42695 1498 aa37.31■■■■□ 3.56
E4F1-203ENST00000563643 NESP48681 1621 aa37.09■■■■□ 3.53
E4F1-203ENST00000563643 TRIM41Q8WV44 630 aa37.08■■■■□ 3.53
E4F1-203ENST00000563643 ATAD2BQ9ULI0 1458 aa37.02■■■■□ 3.52
E4F1-203ENST00000563643 THOC2Q8NI27 1593 aaKnown RBP36.94■■■■□ 3.5
E4F1-203ENST00000563643 HMGXB3Q12766 1538 aa36.92■■■■□ 3.5
E4F1-203ENST00000563643 SMARCA2P51531 1590 aa36.85■■■■□ 3.49
E4F1-203ENST00000563643 SMARCA4P51532 1647 aa36.69■■■■□ 3.46
E4F1-203ENST00000563643 LAMC3Q9Y6N6 1575 aa36.63■■■■□ 3.45
E4F1-203ENST00000563643 BAZ1BQ9UIG0 1483 aaKnown RBP36.61■■■■□ 3.45
E4F1-203ENST00000563643 KIF21AQ7Z4S6 1674 aa36.52■■■■□ 3.44
E4F1-203ENST00000563643 PDS5BQ9NTI5 1447 aa36.47■■■■□ 3.43
E4F1-203ENST00000563643 PEG3Q9GZU2 1588 aa36.35■■■■□ 3.41
E4F1-203ENST00000563643 BAZ1AQ9NRL2 1556 aaPredicted RBP36.35■■■■□ 3.41
E4F1-203ENST00000563643 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
E4F1-203ENST00000563643 WDR62O43379 1518 aa36.18■■■■□ 3.38
E4F1-203ENST00000563643 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
E4F1-203ENST00000563643 OSCARQ8IYS5 282 aa36.05■■■■□ 3.36
E4F1-203ENST00000563643 MROH2BQ7Z745 1585 aa36■■■■□ 3.35
E4F1-203ENST00000563643 CEP164Q9UPV0 1460 aa35.86■■■■□ 3.33
E4F1-203ENST00000563643 FANCD2Q9BXW9 1451 aa35.72■■■■□ 3.31
E4F1-203ENST00000563643 RIMBP3CA6NJZ7 1639 aa35.72■■■■□ 3.31
E4F1-203ENST00000563643 RIMBP3BA6NNM3 1639 aa35.72■■■■□ 3.31
E4F1-203ENST00000563643 RIMBP3Q9UFD9 1639 aa35.72■■■■□ 3.31
E4F1-203ENST00000563643 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
E4F1-203ENST00000563643 URB2Q14146 1524 aaKnown RBP35.5■■■■□ 3.27
E4F1-203ENST00000563643 WIZO95785 1651 aa35.48■■■■□ 3.27
E4F1-203ENST00000563643 CFTRP13569 1480 aa35.47■■■■□ 3.27
E4F1-203ENST00000563643 CYB5RLQ6IPT4 315 aa35.3■■■■□ 3.24
E4F1-203ENST00000563643 TRHP20396 242 aaPredicted RBP35.28■■■■□ 3.24
E4F1-203ENST00000563643 ZNF608Q9ULD9 1512 aaPredicted RBP35.25■■■■□ 3.23
E4F1-203ENST00000563643 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
E4F1-203ENST00000563643 ARAP1Q96P48 1450 aa35.09■■■■□ 3.21
E4F1-203ENST00000563643 AEBP2Q6ZN18 517 aaPredicted RBP35.08■■■■□ 3.21
E4F1-203ENST00000563643 EIF4G3O43432 1585 aaKnown RBP34.99■■■■□ 3.19
E4F1-203ENST00000563643 TOP2AP11388 1531 aaKnown RBP34.98■■■■□ 3.19
E4F1-203ENST00000563643 PRDM2Q13029 1718 aa34.92■■■■□ 3.18
E4F1-203ENST00000563643 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
E4F1-203ENST00000563643 TOPBP1Q92547 1522 aa34.91■■■■□ 3.18
E4F1-203ENST00000563643 CHD1O14646 1710 aa34.89■■■■□ 3.18
E4F1-203ENST00000563643 AQRO60306 1485 aaKnown RBP eCLIP34.78■■■■□ 3.163e-7■■■■■ 73.8
E4F1-203ENST00000563643 FBLN2P98095 1184 aa34.76■■■■□ 3.16
E4F1-203ENST00000563643 ABCC8Q09428 1581 aa34.72■■■■□ 3.15
E4F1-203ENST00000563643 TARBP1Q13395 1621 aaKnown RBP34.67■■■■□ 3.14
E4F1-203ENST00000563643 DNMBPQ6XZF7 1577 aa34.66■■■■□ 3.14
E4F1-203ENST00000563643 CCDC88BA6NC98 1476 aa34.59■■■■□ 3.13
E4F1-203ENST00000563643 CLASP1Q7Z460 1538 aa34.52■■■■□ 3.12
E4F1-203ENST00000563643 POLA1P09884 1462 aaPredicted RBP34.49■■■■□ 3.11
E4F1-203ENST00000563643 SNAPC4Q5SXM2 1469 aa34.39■■■■□ 3.1
E4F1-203ENST00000563643 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
E4F1-203ENST00000563643 SYNJ1O43426 1573 aa34.38■■■■□ 3.09
E4F1-203ENST00000563643 RAD54L2Q9Y4B4 1467 aa34.38■■■■□ 3.09
E4F1-203ENST00000563643 CHMP7Q8WUX9 453 aaPredicted RBP34.32■■■■□ 3.08
E4F1-203ENST00000563643 SOGA1O94964 1423 aa34.29■■■■□ 3.08
E4F1-203ENST00000563643 GAPVD1Q14C86 1478 aa34.25■■■■□ 3.07
E4F1-203ENST00000563643 MAGI1Q96QZ7 1491 aaPredicted RBP34.25■■■■□ 3.07
E4F1-203ENST00000563643 WDR97A6NE52 1622 aa34.23■■■■□ 3.07
E4F1-203ENST00000563643 SYNJ2O15056 1496 aa34.16■■■■□ 3.06
E4F1-203ENST00000563643 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
E4F1-203ENST00000563643 FGD5Q6ZNL6 1462 aa34.1■■■■□ 3.05
E4F1-203ENST00000563643 ERCC6L2Q5T890 1561 aa33.9■■■■□ 3.02
E4F1-203ENST00000563643 CUX1P39880 1505 aa33.89■■■■□ 3.02
E4F1-203ENST00000563643 PBRM1Q86U86 1689 aa33.87■■■■□ 3.01
E4F1-203ENST00000563643 KIF13AQ9H1H9 1805 aa33.74■■■□□ 2.99
E4F1-203ENST00000563643 CEP170Q5SW79 1584 aa33.73■■■□□ 2.99
E4F1-203ENST00000563643 ILDR1Q86SU0 546 aaPredicted RBP33.72■■■□□ 2.99
E4F1-203ENST00000563643 GRIN2AQ12879 1464 aa33.7■■■□□ 2.99
E4F1-203ENST00000563643 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
E4F1-203ENST00000563643 ABCA10Q8WWZ4 1543 aa33.64■■■□□ 2.98
E4F1-203ENST00000563643 NUP160Q12769 1436 aa33.63■■■□□ 2.97
E4F1-203ENST00000563643 SHROOM2Q13796 1616 aa33.6■■■□□ 2.97
E4F1-203ENST00000563643 KDM4FA0A1W2PPD8 638 aa33.56■■■□□ 2.96
E4F1-203ENST00000563643 ADAMTS12P58397 1594 aa33.54■■■□□ 2.96
E4F1-203ENST00000563643 FAM69CQ0P6D2 419 aa33.49■■■□□ 2.95
E4F1-203ENST00000563643 ABCC10Q5T3U5 1492 aa33.49■■■□□ 2.95
E4F1-203ENST00000563643 PRG4Q92954 1404 aaPredicted RBP33.4■■■□□ 2.94
E4F1-203ENST00000563643 FHAD1B1AJZ9 1412 aa33.38■■■□□ 2.93
E4F1-203ENST00000563643 KDM6BO15054 1643 aa33.36■■■□□ 2.93
E4F1-203ENST00000563643 DIP2BQ9P265 1576 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms