RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
TMEM87A-205ENST00000562946 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
TMEM87A-205ENST00000562946 GGT6Q6P531 493 aa13.64□□□□□ -0.23
TMEM87A-205ENST00000562946 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
TMEM87A-205ENST00000562946 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
TMEM87A-205ENST00000562946 ABCC5O15440 1437 aa13.63□□□□□ -0.23
TMEM87A-205ENST00000562946 KIF3BO15066 747 aa13.62□□□□□ -0.23
TMEM87A-205ENST00000562946 ZBTB22O15209 634 aa13.62□□□□□ -0.23
TMEM87A-205ENST00000562946 DAPK1P53355 1430 aa13.62□□□□□ -0.23
TMEM87A-205ENST00000562946 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
TMEM87A-205ENST00000562946 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
TMEM87A-205ENST00000562946 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
TMEM87A-205ENST00000562946 EIF2AK4Q9P2K8 1649 aaKnown RBP13.59□□□□□ -0.23
TMEM87A-205ENST00000562946 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.23
TMEM87A-205ENST00000562946 RNF17Q9BXT8 1623 aaKnown RBP13.58□□□□□ -0.23
TMEM87A-205ENST00000562946 HSPA2P54652 639 aa13.58□□□□□ -0.24
TMEM87A-205ENST00000562946 DMRT2Q9Y5R5 561 aa13.57□□□□□ -0.24
TMEM87A-205ENST00000562946 FAM135AQ9P2D6 1515 aa13.57□□□□□ -0.24
TMEM87A-205ENST00000562946 NPATQ14207 1427 aa13.57□□□□□ -0.24
TMEM87A-205ENST00000562946 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
TMEM87A-205ENST00000562946 KIF15Q9NS87 1388 aa13.56□□□□□ -0.24
TMEM87A-205ENST00000562946 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
TMEM87A-205ENST00000562946 RRP7BPQ9NSQ0 103 aa13.56□□□□□ -0.24
TMEM87A-205ENST00000562946 KDM5DQ9BY66 1539 aa13.55□□□□□ -0.24
TMEM87A-205ENST00000562946 UHRF1BP1Q6BDS2 1440 aa13.55□□□□□ -0.24
TMEM87A-205ENST00000562946 MROH1Q8NDA8 1641 aa13.55□□□□□ -0.24
TMEM87A-205ENST00000562946 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
TMEM87A-205ENST00000562946 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
TMEM87A-205ENST00000562946 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
TMEM87A-205ENST00000562946 NCOA1Q15788 1441 aa13.54□□□□□ -0.24
TMEM87A-205ENST00000562946 STRCQ7RTU9 1775 aa13.54□□□□□ -0.24
TMEM87A-205ENST00000562946 WASHC2CQ9Y4E1 1318 aa13.53□□□□□ -0.24
TMEM87A-205ENST00000562946 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
TMEM87A-205ENST00000562946 ERBINQ96RT1 1412 aa13.53□□□□□ -0.24
TMEM87A-205ENST00000562946 ADGRL2O95490 1459 aa13.53□□□□□ -0.24
TMEM87A-205ENST00000562946 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
TMEM87A-205ENST00000562946 CEP152O94986 1710 aa13.52□□□□□ -0.24
TMEM87A-205ENST00000562946 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
TMEM87A-205ENST00000562946 MYO3AQ8NEV4 1616 aa13.51□□□□□ -0.25
TMEM87A-205ENST00000562946 ABCC3O15438 1527 aa13.51□□□□□ -0.25
TMEM87A-205ENST00000562946 ZNF142P52746 1687 aaPredicted RBP13.51□□□□□ -0.25
TMEM87A-205ENST00000562946 PZPP20742 1482 aa13.5□□□□□ -0.25
TMEM87A-205ENST00000562946 PRDM15P57071 1507 aaPredicted RBP13.5□□□□□ -0.25
TMEM87A-205ENST00000562946 FBXO31Q5XUX0 539 aaPredicted RBP13.49□□□□□ -0.25
TMEM87A-205ENST00000562946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.49□□□□□ -0.25
TMEM87A-205ENST00000562946 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
TMEM87A-205ENST00000562946 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
TMEM87A-205ENST00000562946 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
TMEM87A-205ENST00000562946 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
TMEM87A-205ENST00000562946 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
TMEM87A-205ENST00000562946 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
TMEM87A-205ENST00000562946 TNRQ92752 1358 aa13.45□□□□□ -0.26
TMEM87A-205ENST00000562946 SPATA31D1Q6ZQQ2 1576 aa13.44□□□□□ -0.26
TMEM87A-205ENST00000562946 A2ML1A8K2U0 1454 aa13.44□□□□□ -0.26
TMEM87A-205ENST00000562946 ROCK1Q13464 1354 aa13.44□□□□□ -0.26
TMEM87A-205ENST00000562946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.261e-7■■■■□ 23.9
TMEM87A-205ENST00000562946 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
TMEM87A-205ENST00000562946 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
TMEM87A-205ENST00000562946 KANK1Q14678 1352 aa13.42□□□□□ -0.26
TMEM87A-205ENST00000562946 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
TMEM87A-205ENST00000562946 ITGAEP38570 1179 aa13.41□□□□□ -0.26
TMEM87A-205ENST00000562946 PLA2R1Q13018 1463 aa13.41□□□□□ -0.26
TMEM87A-205ENST00000562946 NLRP1Q9C000 1473 aa13.4□□□□□ -0.26
TMEM87A-205ENST00000562946 PTPRTO14522 1441 aa13.4□□□□□ -0.26
TMEM87A-205ENST00000562946 UNC13BO14795 1591 aa13.39□□□□□ -0.27
TMEM87A-205ENST00000562946 NCKAP5LQ9HCH0 1330 aa13.38□□□□□ -0.27
TMEM87A-205ENST00000562946 POLR1AO95602 1720 aaPredicted RBP13.38□□□□□ -0.27
TMEM87A-205ENST00000562946 UGGT1Q9NYU2 1555 aa13.38□□□□□ -0.27
TMEM87A-205ENST00000562946 EFCAB6Q5THR3 1501 aa13.38□□□□□ -0.27
TMEM87A-205ENST00000562946 PKD2Q13563 968 aa13.37□□□□□ -0.27
TMEM87A-205ENST00000562946 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
TMEM87A-205ENST00000562946 TET3O43151 1660 aa13.36□□□□□ -0.27
TMEM87A-205ENST00000562946 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
TMEM87A-205ENST00000562946 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
TMEM87A-205ENST00000562946 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
TMEM87A-205ENST00000562946 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
TMEM87A-205ENST00000562946 NOS1P29475 1434 aa13.34□□□□□ -0.27
TMEM87A-205ENST00000562946 SYNMO15061 1565 aa13.33□□□□□ -0.27
TMEM87A-205ENST00000562946 NEURL4Q96JN8 1562 aa13.33□□□□□ -0.27
TMEM87A-205ENST00000562946 ILDR1Q86SU0 546 aaPredicted RBP13.33□□□□□ -0.28
TMEM87A-205ENST00000562946 PIK3C2BO00750 1634 aa13.33□□□□□ -0.28
TMEM87A-205ENST00000562946 E9PCH4 1651 aa13.33□□□□□ -0.28
TMEM87A-205ENST00000562946 RPRD2Q5VT52 1461 aaKnown RBP13.33□□□□□ -0.28
TMEM87A-205ENST00000562946 KDM5AP29375 1690 aaKnown RBP13.32□□□□□ -0.28
TMEM87A-205ENST00000562946 NAIPQ13075 1403 aa13.31□□□□□ -0.28
TMEM87A-205ENST00000562946 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
TMEM87A-205ENST00000562946 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
TMEM87A-205ENST00000562946 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
TMEM87A-205ENST00000562946 NUP155O75694 1391 aa13.3□□□□□ -0.28
TMEM87A-205ENST00000562946 IDI1Q13907 227 aa13.3□□□□□ -0.28
TMEM87A-205ENST00000562946 MYO5BQ9ULV0 1848 aa13.3□□□□□ -0.28
TMEM87A-205ENST00000562946 MED14O60244 1454 aa13.3□□□□□ -0.28
TMEM87A-205ENST00000562946 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
TMEM87A-205ENST00000562946 SLIT1O75093 1534 aa13.28□□□□□ -0.28
TMEM87A-205ENST00000562946 FBXO41Q8TF61 875 aa13.28□□□□□ -0.28
TMEM87A-205ENST00000562946 IQGAP1P46940 1657 aa13.27□□□□□ -0.28
TMEM87A-205ENST00000562946 HFM1A2PYH4 1435 aa13.27□□□□□ -0.28
TMEM87A-205ENST00000562946 SLC52A1Q9NWF4 448 aa13.27□□□□□ -0.29
TMEM87A-205ENST00000562946 ZNF335Q9H4Z2 1342 aaPredicted RBP13.27□□□□□ -0.29
TMEM87A-205ENST00000562946 NPHP4O75161 1426 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms