RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 NBPF8Q3BBV2 869 aa17.82■□□□□ 0.44
AC055717.2-201ENST00000561864 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
AC055717.2-201ENST00000561864 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
AC055717.2-201ENST00000561864 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
AC055717.2-201ENST00000561864 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
AC055717.2-201ENST00000561864 KDM5CP41229 1560 aa17.79■□□□□ 0.44
AC055717.2-201ENST00000561864 VWDEQ8N2E2 1590 aa17.79■□□□□ 0.44
AC055717.2-201ENST00000561864 TET3O43151 1660 aa17.78■□□□□ 0.44
AC055717.2-201ENST00000561864 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
AC055717.2-201ENST00000561864 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
AC055717.2-201ENST00000561864 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
AC055717.2-201ENST00000561864 PRDM15P57071 1507 aaPredicted RBP17.77■□□□□ 0.43
AC055717.2-201ENST00000561864 KIDINS220Q9ULH0 1771 aa17.76■□□□□ 0.43
AC055717.2-201ENST00000561864 NEO1Q92859 1461 aa17.76■□□□□ 0.43
AC055717.2-201ENST00000561864 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
AC055717.2-201ENST00000561864 POGZQ7Z3K3 1410 aa17.75■□□□□ 0.43
AC055717.2-201ENST00000561864 E9PCH4 1651 aa17.75■□□□□ 0.43
AC055717.2-201ENST00000561864 FAM69CQ0P6D2 419 aa17.74■□□□□ 0.43
AC055717.2-201ENST00000561864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.74■□□□□ 0.43
AC055717.2-201ENST00000561864 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
AC055717.2-201ENST00000561864 GLI2P10070 1586 aa17.74■□□□□ 0.43
AC055717.2-201ENST00000561864 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
AC055717.2-201ENST00000561864 WASHC2AQ641Q2 1341 aa17.73■□□□□ 0.43
AC055717.2-201ENST00000561864 TRPM2O94759 1503 aa17.73■□□□□ 0.43
AC055717.2-201ENST00000561864 KANK1Q14678 1352 aa17.73■□□□□ 0.43
AC055717.2-201ENST00000561864 MROH1Q8NDA8 1641 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 RNF17Q9BXT8 1623 aaKnown RBP17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 SPHKAPQ2M3C7 1700 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 MLH3Q9UHC1 1453 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 CCDC7Q96M83 1385 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 ANP32CO43423 234 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 BCORL1Q5H9F3 1711 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 LAMC1P11047 1609 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 CNTLNQ9NXG0 1405 aa17.72■□□□□ 0.43
AC055717.2-201ENST00000561864 TRPM1Q7Z4N2 1603 aa17.71■□□□□ 0.43
AC055717.2-201ENST00000561864 USP47Q96K76 1375 aa17.7■□□□□ 0.42
AC055717.2-201ENST00000561864 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
AC055717.2-201ENST00000561864 CEP152O94986 1710 aa17.69■□□□□ 0.42
AC055717.2-201ENST00000561864 PTPRTO14522 1441 aa17.69■□□□□ 0.42
AC055717.2-201ENST00000561864 PRAG1Q86YV5 1406 aa17.69■□□□□ 0.42
AC055717.2-201ENST00000561864 NEURL4Q96JN8 1562 aa17.69■□□□□ 0.42
AC055717.2-201ENST00000561864 A2MP01023 1474 aa17.69■□□□□ 0.42
AC055717.2-201ENST00000561864 LMTK2Q8IWU2 1503 aa17.68■□□□□ 0.42
AC055717.2-201ENST00000561864 EFCAB6Q5THR3 1501 aa17.67■□□□□ 0.42
AC055717.2-201ENST00000561864 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
AC055717.2-201ENST00000561864 FRMPD1Q5SYB0 1578 aa17.65■□□□□ 0.42
AC055717.2-201ENST00000561864 DIP2BQ9P265 1576 aa17.65■□□□□ 0.42
AC055717.2-201ENST00000561864 ABCA6Q8N139 1617 aa17.65■□□□□ 0.42
AC055717.2-201ENST00000561864 ZNF326Q5BKZ1 582 aaKnown RBP17.64■□□□□ 0.41
AC055717.2-201ENST00000561864 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
AC055717.2-201ENST00000561864 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
AC055717.2-201ENST00000561864 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
AC055717.2-201ENST00000561864 RICTORQ6R327 1708 aa17.62■□□□□ 0.41
AC055717.2-201ENST00000561864 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
AC055717.2-201ENST00000561864 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
AC055717.2-201ENST00000561864 PPRC1Q5VV67 1664 aaKnown RBP17.61■□□□□ 0.41
AC055717.2-201ENST00000561864 C11orf95C9JLR9 678 aaPredicted RBP17.6■□□□□ 0.41
AC055717.2-201ENST00000561864 KIF3BO15066 747 aa17.6■□□□□ 0.41
AC055717.2-201ENST00000561864 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
AC055717.2-201ENST00000561864 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
AC055717.2-201ENST00000561864 KIF13AQ9H1H9 1805 aa17.59■□□□□ 0.41
AC055717.2-201ENST00000561864 MADDQ8WXG6 1647 aa17.59■□□□□ 0.41
AC055717.2-201ENST00000561864 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
AC055717.2-201ENST00000561864 STAC3Q96MF2 364 aa17.58■□□□□ 0.4
AC055717.2-201ENST00000561864 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
AC055717.2-201ENST00000561864 ZMYM4Q5VZL5 1548 aa17.56■□□□□ 0.4
AC055717.2-201ENST00000561864 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
AC055717.2-201ENST00000561864 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
AC055717.2-201ENST00000561864 KIAA1210Q9ULL0 1709 aa17.54■□□□□ 0.4
AC055717.2-201ENST00000561864 RGL3Q3MIN7 710 aa17.53■□□□□ 0.4
AC055717.2-201ENST00000561864 KIF1BO60333 1816 aa17.53■□□□□ 0.4
AC055717.2-201ENST00000561864 ABCC3O15438 1527 aa17.52■□□□□ 0.4
AC055717.2-201ENST00000561864 MYOM2P54296 1465 aa17.51■□□□□ 0.39
AC055717.2-201ENST00000561864 CAMSAP1Q5T5Y3 1602 aa17.51■□□□□ 0.39
AC055717.2-201ENST00000561864 IFT172Q9UG01 1749 aa17.51■□□□□ 0.39
AC055717.2-201ENST00000561864 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
AC055717.2-201ENST00000561864 ADGRB3O60242 1522 aa17.48■□□□□ 0.39
AC055717.2-201ENST00000561864 COL17A1Q9UMD9 1497 aaPredicted RBP17.48■□□□□ 0.39
AC055717.2-201ENST00000561864 REREQ9P2R6 1566 aa17.48■□□□□ 0.39
AC055717.2-201ENST00000561864 ST20-MTHFSA0A0A6YYL1 179 aa17.47■□□□□ 0.39
AC055717.2-201ENST00000561864 MROH2AA6NES4 1674 aa17.47■□□□□ 0.39
AC055717.2-201ENST00000561864 TSPOAP1O95153 1857 aa17.47■□□□□ 0.39
AC055717.2-201ENST00000561864 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
AC055717.2-201ENST00000561864 NPATQ14207 1427 aa17.46■□□□□ 0.39
AC055717.2-201ENST00000561864 UGGT1Q9NYU2 1555 aa17.45■□□□□ 0.38
AC055717.2-201ENST00000561864 RAPGEF3O95398 923 aa17.45■□□□□ 0.38
AC055717.2-201ENST00000561864 ARHGAP31Q2M1Z3 1444 aa17.44■□□□□ 0.38
AC055717.2-201ENST00000561864 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
AC055717.2-201ENST00000561864 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
AC055717.2-201ENST00000561864 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
AC055717.2-201ENST00000561864 YEATS2Q9ULM3 1422 aa17.42■□□□□ 0.38
AC055717.2-201ENST00000561864 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
AC055717.2-201ENST00000561864 NOS1P29475 1434 aa17.41■□□□□ 0.38
AC055717.2-201ENST00000561864 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
AC055717.2-201ENST00000561864 PPLO60437 1756 aa17.39■□□□□ 0.37
AC055717.2-201ENST00000561864 AGLP35573 1532 aa17.39■□□□□ 0.37
AC055717.2-201ENST00000561864 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
AC055717.2-201ENST00000561864 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms