RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 FKBP8Q14318 412 aa11.13□□□□□ -0.63
ZEB1-221ENST00000561061 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
ZEB1-221ENST00000561061 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
ZEB1-221ENST00000561061 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
ZEB1-221ENST00000561061 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
ZEB1-221ENST00000561061 TRAPPC8Q9Y2L5 1435 aa11.11□□□□□ -0.63
ZEB1-221ENST00000561061 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
ZEB1-221ENST00000561061 PROM2Q8N271 834 aa11.11□□□□□ -0.63
ZEB1-221ENST00000561061 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
ZEB1-221ENST00000561061 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
ZEB1-221ENST00000561061 CDK11AQ9UQ88 783 aaPredicted RBP11.11□□□□□ -0.63
ZEB1-221ENST00000561061 NCOA1Q15788 1441 aa11.1□□□□□ -0.63
ZEB1-221ENST00000561061 CAMSAP1Q5T5Y3 1602 aa11.1□□□□□ -0.63
ZEB1-221ENST00000561061 CCDC18Q5T9S5 1454 aa11.1□□□□□ -0.63
ZEB1-221ENST00000561061 POLR1AO95602 1720 aaPredicted RBP11.09□□□□□ -0.63
ZEB1-221ENST00000561061 INO80Q9ULG1 1556 aaPredicted RBP11.09□□□□□ -0.63
ZEB1-221ENST00000561061 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
ZEB1-221ENST00000561061 ADGBQ8N7X0 1667 aa11.08□□□□□ -0.64
ZEB1-221ENST00000561061 PLXNC1O60486 1568 aa11.08□□□□□ -0.64
ZEB1-221ENST00000561061 SYCP2Q9BX26 1530 aa11.08□□□□□ -0.64
ZEB1-221ENST00000561061 SOCS7O14512 581 aa11.07□□□□□ -0.64
ZEB1-221ENST00000561061 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
ZEB1-221ENST00000561061 ATP7AQ04656 1500 aa11.06□□□□□ -0.64
ZEB1-221ENST00000561061 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
ZEB1-221ENST00000561061 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
ZEB1-221ENST00000561061 CASKIN1Q8WXD9 1431 aa11.06□□□□□ -0.64
ZEB1-221ENST00000561061 NPATQ14207 1427 aa11.05□□□□□ -0.64
ZEB1-221ENST00000561061 CEP170BQ9Y4F5 1589 aaPredicted RBP11.05□□□□□ -0.64
ZEB1-221ENST00000561061 FYCO1Q9BQS8 1478 aa11.05□□□□□ -0.64
ZEB1-221ENST00000561061 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
ZEB1-221ENST00000561061 CHADLQ6NUI6 762 aa11.02□□□□□ -0.65
ZEB1-221ENST00000561061 ESF1Q9H501 851 aaKnown RBP11.02□□□□□ -0.65
ZEB1-221ENST00000561061 PLA2R1Q13018 1463 aa11.01□□□□□ -0.65
ZEB1-221ENST00000561061 GPATCH8Q9UKJ3 1502 aaKnown RBP11□□□□□ -0.65
ZEB1-221ENST00000561061 DNMT1P26358 1616 aaKnown RBP11□□□□□ -0.65
ZEB1-221ENST00000561061 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
ZEB1-221ENST00000561061 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
ZEB1-221ENST00000561061 CFAP65Q6ZU64 1925 aaKnown RBP10.99□□□□□ -0.65
ZEB1-221ENST00000561061 A2MP01023 1474 aa10.99□□□□□ -0.65
ZEB1-221ENST00000561061 ZMYM3Q14202 1370 aa10.98□□□□□ -0.65
ZEB1-221ENST00000561061 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
ZEB1-221ENST00000561061 PLEKHH2Q8IVE3 1493 aa10.98□□□□□ -0.65
ZEB1-221ENST00000561061 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
ZEB1-221ENST00000561061 NEURL4Q96JN8 1562 aa10.98□□□□□ -0.65
ZEB1-221ENST00000561061 ZNF335Q9H4Z2 1342 aaPredicted RBP10.97□□□□□ -0.65
ZEB1-221ENST00000561061 KIAA1107Q9UPP5 1409 aa10.96□□□□□ -0.65
ZEB1-221ENST00000561061 SPAG9O60271 1321 aaKnown RBP10.96□□□□□ -0.65
ZEB1-221ENST00000561061 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
ZEB1-221ENST00000561061 MED1Q15648 1581 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-221ENST00000561061 ZNF777Q9ULD5 760 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-221ENST00000561061 A2ML1A8K2U0 1454 aa10.94□□□□□ -0.66
ZEB1-221ENST00000561061 STRCP1A6NGW2 1772 aa10.94□□□□□ -0.66
ZEB1-221ENST00000561061 HNRNPMP52272 730 aaKnown RBP eCLIP10.93□□□□□ -0.664e-6■■■■□ 20.1
ZEB1-221ENST00000561061 EHBP1L1Q8N3D4 1523 aa10.93□□□□□ -0.66
ZEB1-221ENST00000561061 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
ZEB1-221ENST00000561061 UBAP1LF5GYI3 381 aa10.92□□□□□ -0.66
ZEB1-221ENST00000561061 PKD2Q13563 968 aa10.92□□□□□ -0.66
ZEB1-221ENST00000561061 IQGAP1P46940 1657 aa10.92□□□□□ -0.66
ZEB1-221ENST00000561061 DEPDC5O75140 1603 aa10.91□□□□□ -0.66
ZEB1-221ENST00000561061 CCNB3Q8WWL7 1395 aa10.91□□□□□ -0.66
ZEB1-221ENST00000561061 CPS1P31327 1500 aa10.91□□□□□ -0.66
ZEB1-221ENST00000561061 KDM5DQ9BY66 1539 aa10.91□□□□□ -0.66
ZEB1-221ENST00000561061 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
ZEB1-221ENST00000561061 VWDEQ8N2E2 1590 aa10.9□□□□□ -0.66
ZEB1-221ENST00000561061 ALKQ9UM73 1620 aa10.9□□□□□ -0.66
ZEB1-221ENST00000561061 CEP152O94986 1710 aa10.89□□□□□ -0.67
ZEB1-221ENST00000561061 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
ZEB1-221ENST00000561061 XIRP1Q702N8 1843 aaKnown RBP10.89□□□□□ -0.67
ZEB1-221ENST00000561061 MBD5Q9P267 1494 aa10.89□□□□□ -0.67
ZEB1-221ENST00000561061 CFDP1Q9UEE9 299 aaPredicted RBP10.89□□□□□ -0.67
ZEB1-221ENST00000561061 PZPP20742 1482 aa10.88□□□□□ -0.67
ZEB1-221ENST00000561061 RNF17Q9BXT8 1623 aaKnown RBP10.88□□□□□ -0.67
ZEB1-221ENST00000561061 SYNMO15061 1565 aa10.88□□□□□ -0.67
ZEB1-221ENST00000561061 GGT6Q6P531 493 aa10.88□□□□□ -0.67
ZEB1-221ENST00000561061 MTUS2Q5JR59 1369 aa10.88□□□□□ -0.67
ZEB1-221ENST00000561061 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
ZEB1-221ENST00000561061 RTEL1-TNFRSF6BF6WH68 1400 aa10.87□□□□□ -0.67
ZEB1-221ENST00000561061 TNRQ92752 1358 aa10.86□□□□□ -0.67
ZEB1-221ENST00000561061 UBR1Q8IWV7 1749 aa10.86□□□□□ -0.67
ZEB1-221ENST00000561061 CAMSAP2Q08AD1 1489 aa10.86□□□□□ -0.67
ZEB1-221ENST00000561061 CCDC141Q6ZP82 1450 aa10.86□□□□□ -0.67
ZEB1-221ENST00000561061 ARHGEF5Q12774 1597 aa10.86□□□□□ -0.67
ZEB1-221ENST00000561061 DHX29Q7Z478 1369 aaKnown RBP10.85□□□□□ -0.67
ZEB1-221ENST00000561061 UGGT1Q9NYU2 1555 aa10.85□□□□□ -0.67
ZEB1-221ENST00000561061 ZNF644Q9H582 1327 aaPredicted RBP10.84□□□□□ -0.67
ZEB1-221ENST00000561061 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
ZEB1-221ENST00000561061 EIF2AK4Q9P2K8 1649 aaKnown RBP10.84□□□□□ -0.67
ZEB1-221ENST00000561061 HAX1O00165 279 aa10.84□□□□□ -0.67
ZEB1-221ENST00000561061 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
ZEB1-221ENST00000561061 MED14O60244 1454 aa10.83□□□□□ -0.68
ZEB1-221ENST00000561061 NLRP1Q9C000 1473 aa10.83□□□□□ -0.68
ZEB1-221ENST00000561061 HSPA1LP34931 641 aa10.83□□□□□ -0.68
ZEB1-221ENST00000561061 MROH1Q8NDA8 1641 aa10.82□□□□□ -0.68
ZEB1-221ENST00000561061 MAST1Q9Y2H9 1570 aa10.82□□□□□ -0.68
ZEB1-221ENST00000561061 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
ZEB1-221ENST00000561061 FBXO31Q5XUX0 539 aaPredicted RBP10.81□□□□□ -0.68
ZEB1-221ENST00000561061 NPHP4O75161 1426 aaPredicted RBP10.81□□□□□ -0.68
ZEB1-221ENST00000561061 NCOA2Q15596 1464 aa10.81□□□□□ -0.68
ZEB1-221ENST00000561061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
ZEB1-221ENST00000561061 ABCC3O15438 1527 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms