RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 PLPPR3Q6T4P5 718 aa25.36■■□□□ 1.65
RPL28-211ENST00000560881 MROH1Q8NDA8 1641 aa25.35■■□□□ 1.65
RPL28-211ENST00000560881 ROCK1Q13464 1354 aa25.35■■□□□ 1.65
RPL28-211ENST00000560881 C3P01024 1663 aa25.31■■□□□ 1.64
RPL28-211ENST00000560881 ANKRD50Q9ULJ7 1429 aa25.3■■□□□ 1.64
RPL28-211ENST00000560881 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
RPL28-211ENST00000560881 CEBPAP49715 358 aaPredicted RBP25.29■■□□□ 1.64
RPL28-211ENST00000560881 ESF1Q9H501 851 aaKnown RBP25.29■■□□□ 1.64
RPL28-211ENST00000560881 MROH2AA6NES4 1674 aa25.27■■□□□ 1.64
RPL28-211ENST00000560881 CEP152O94986 1710 aa25.27■■□□□ 1.64
RPL28-211ENST00000560881 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
RPL28-211ENST00000560881 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
RPL28-211ENST00000560881 CNTLNQ9NXG0 1405 aa25.26■■□□□ 1.63
RPL28-211ENST00000560881 GCC2Q8IWJ2 1684 aa25.25■■□□□ 1.63
RPL28-211ENST00000560881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.23■■□□□ 1.63
RPL28-211ENST00000560881 ABCC3O15438 1527 aa25.23■■□□□ 1.63
RPL28-211ENST00000560881 NAIPQ13075 1403 aa25.22■■□□□ 1.63
RPL28-211ENST00000560881 WASHC2CQ9Y4E1 1318 aa25.22■■□□□ 1.63
RPL28-211ENST00000560881 ZC3H13Q5T200 1668 aaKnown RBP25.22■■□□□ 1.63
RPL28-211ENST00000560881 ZMYM3Q14202 1370 aa25.21■■□□□ 1.63
RPL28-211ENST00000560881 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.63
RPL28-211ENST00000560881 FAM135AQ9P2D6 1515 aa25.2■■□□□ 1.62
RPL28-211ENST00000560881 UNC13BO14795 1591 aa25.18■■□□□ 1.62
RPL28-211ENST00000560881 HFM1A2PYH4 1435 aa25.18■■□□□ 1.62
RPL28-211ENST00000560881 CAMSAP1Q5T5Y3 1602 aa25.17■■□□□ 1.62
RPL28-211ENST00000560881 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
RPL28-211ENST00000560881 CFAP65Q6ZU64 1925 aaKnown RBP25.13■■□□□ 1.61
RPL28-211ENST00000560881 KANK1Q14678 1352 aa25.12■■□□□ 1.61
RPL28-211ENST00000560881 PZPP20742 1482 aa25.11■■□□□ 1.61
RPL28-211ENST00000560881 FBXO31Q5XUX0 539 aaPredicted RBP25.09■■□□□ 1.61
RPL28-211ENST00000560881 PREX1Q8TCU6 1659 aa25.09■■□□□ 1.61
RPL28-211ENST00000560881 LMTK2Q8IWU2 1503 aa25.09■■□□□ 1.61
RPL28-211ENST00000560881 IQGAP3Q86VI3 1631 aa25.07■■□□□ 1.6
RPL28-211ENST00000560881 SETD1BQ9UPS6 1966 aaKnown RBP25.07■■□□□ 1.6
RPL28-211ENST00000560881 LMTK3Q96Q04 1460 aa25.06■■□□□ 1.6
RPL28-211ENST00000560881 EFCAB6Q5THR3 1501 aa25.06■■□□□ 1.6
RPL28-211ENST00000560881 NPATQ14207 1427 aa25.06■■□□□ 1.6
RPL28-211ENST00000560881 NUP155O75694 1391 aa25.05■■□□□ 1.6
RPL28-211ENST00000560881 MYO3AQ8NEV4 1616 aa25.04■■□□□ 1.6
RPL28-211ENST00000560881 TET3O43151 1660 aa25.04■■□□□ 1.6
RPL28-211ENST00000560881 ERVK-7P63135 1459 aa25.02■■□□□ 1.6
RPL28-211ENST00000560881 ARHGAP31Q2M1Z3 1444 aa25.01■■□□□ 1.59
RPL28-211ENST00000560881 SPATA31D1Q6ZQQ2 1576 aa25.01■■□□□ 1.59
RPL28-211ENST00000560881 UHRF1BP1Q6BDS2 1440 aa25■■□□□ 1.59
RPL28-211ENST00000560881 E9PCH4 1651 aa25■■□□□ 1.59
RPL28-211ENST00000560881 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
RPL28-211ENST00000560881 TNRQ92752 1358 aa24.99■■□□□ 1.59
RPL28-211ENST00000560881 HSPA2P54652 639 aa24.96■■□□□ 1.59
RPL28-211ENST00000560881 TRIM52Q96A61 297 aa24.96■■□□□ 1.59
RPL28-211ENST00000560881 ZNF142P52746 1687 aaPredicted RBP24.96■■□□□ 1.59
RPL28-211ENST00000560881 RAB3GAP2Q9H2M9 1393 aa24.95■■□□□ 1.58
RPL28-211ENST00000560881 CEP170BQ9Y4F5 1589 aaPredicted RBP24.94■■□□□ 1.58
RPL28-211ENST00000560881 SYNMO15061 1565 aa24.93■■□□□ 1.58
RPL28-211ENST00000560881 RPRD2Q5VT52 1461 aaKnown RBP24.91■■□□□ 1.58
RPL28-211ENST00000560881 NOS1P29475 1434 aa24.89■■□□□ 1.57
RPL28-211ENST00000560881 A2ML1A8K2U0 1454 aa24.88■■□□□ 1.57
RPL28-211ENST00000560881 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
RPL28-211ENST00000560881 UGGT1Q9NYU2 1555 aa24.86■■□□□ 1.57
RPL28-211ENST00000560881 SPHKAPQ2M3C7 1700 aa24.85■■□□□ 1.57
RPL28-211ENST00000560881 PIK3C2BO00750 1634 aa24.85■■□□□ 1.57
RPL28-211ENST00000560881 TRIM26Q12899 539 aaPredicted RBP24.85■■□□□ 1.57
RPL28-211ENST00000560881 SLC4A1APQ9BWU0 796 aaKnown RBP24.84■■□□□ 1.57
RPL28-211ENST00000560881 UBR1Q8IWV7 1749 aa24.82■■□□□ 1.56
RPL28-211ENST00000560881 PKD2Q13563 968 aa24.81■■□□□ 1.56
RPL28-211ENST00000560881 STRCQ7RTU9 1775 aa24.81■■□□□ 1.56
RPL28-211ENST00000560881 FOXD1Q16676 465 aa24.8■■□□□ 1.56
RPL28-211ENST00000560881 IDI1Q13907 227 aa24.79■■□□□ 1.56
RPL28-211ENST00000560881 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
RPL28-211ENST00000560881 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
RPL28-211ENST00000560881 PTPRTO14522 1441 aa24.76■■□□□ 1.55
RPL28-211ENST00000560881 PLA2R1Q13018 1463 aa24.74■■□□□ 1.55
RPL28-211ENST00000560881 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
RPL28-211ENST00000560881 ADGRB3O60242 1522 aa24.74■■□□□ 1.55
RPL28-211ENST00000560881 TRPM2O94759 1503 aa24.74■■□□□ 1.55
RPL28-211ENST00000560881 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
RPL28-211ENST00000560881 KDM5AP29375 1690 aaKnown RBP24.71■■□□□ 1.55
RPL28-211ENST00000560881 POLR1AO95602 1720 aaPredicted RBP24.71■■□□□ 1.55
RPL28-211ENST00000560881 TMEM131LA2VDJ0 1609 aa24.7■■□□□ 1.54
RPL28-211ENST00000560881 HRCP23327 699 aa24.7■■□□□ 1.54
RPL28-211ENST00000560881 NCKAP5LQ9HCH0 1330 aa24.7■■□□□ 1.54
RPL28-211ENST00000560881 THEMISQ8N1K5 641 aaPredicted RBP24.69■■□□□ 1.54
RPL28-211ENST00000560881 STAG3Q9UJ98 1225 aa24.69■■□□□ 1.54
RPL28-211ENST00000560881 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
RPL28-211ENST00000560881 CHGAP10645 457 aaKnown RBP24.66■■□□□ 1.54
RPL28-211ENST00000560881 NEURL4Q96JN8 1562 aa24.66■■□□□ 1.54
RPL28-211ENST00000560881 SLIT1O75093 1534 aa24.64■■□□□ 1.54
RPL28-211ENST00000560881 ARHGAP23Q9P227 1491 aa24.64■■□□□ 1.54
RPL28-211ENST00000560881 KIF1BO60333 1816 aa24.63■■□□□ 1.53
RPL28-211ENST00000560881 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
RPL28-211ENST00000560881 ANKLE2Q86XL3 938 aa24.59■■□□□ 1.53
RPL28-211ENST00000560881 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
RPL28-211ENST00000560881 SCAF11Q99590 1463 aaKnown RBP24.59■■□□□ 1.53
RPL28-211ENST00000560881 LTKP29376 864 aa24.59■■□□□ 1.53
RPL28-211ENST00000560881 CCDC144AA2RUR9 1427 aa24.57■■□□□ 1.52
RPL28-211ENST00000560881 IQGAP1P46940 1657 aa24.56■■□□□ 1.52
RPL28-211ENST00000560881 ZFYVE9O95405 1425 aa24.56■■□□□ 1.52
RPL28-211ENST00000560881 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
RPL28-211ENST00000560881 RIMS2Q9UQ26 1411 aa24.55■■□□□ 1.52
RPL28-211ENST00000560881 NUTM2DQ5VT03 806 aaPredicted RBP24.54■■□□□ 1.52
RPL28-211ENST00000560881 NPHP4O75161 1426 aaPredicted RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms