RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 FAM50AQ14320 339 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-207ENST00000558936 KIF15Q9NS87 1388 aa19.62■□□□□ 0.73
RABGGTA-207ENST00000558936 SETD1BQ9UPS6 1966 aaKnown RBP19.62■□□□□ 0.73
RABGGTA-207ENST00000558936 HSPA2P54652 639 aa19.61■□□□□ 0.73
RABGGTA-207ENST00000558936 CNTLNQ9NXG0 1405 aa19.6■□□□□ 0.73
RABGGTA-207ENST00000558936 RRBP1Q9P2E9 1410 aaKnown RBP19.6■□□□□ 0.73
RABGGTA-207ENST00000558936 PREX1Q8TCU6 1659 aa19.6■□□□□ 0.73
RABGGTA-207ENST00000558936 DEPDC5O75140 1603 aa19.59■□□□□ 0.73
RABGGTA-207ENST00000558936 CEP152O94986 1710 aa19.59■□□□□ 0.73
RABGGTA-207ENST00000558936 ABCC3O15438 1527 aa19.58■□□□□ 0.73
RABGGTA-207ENST00000558936 FBXO31Q5XUX0 539 aaPredicted RBP19.57■□□□□ 0.72
RABGGTA-207ENST00000558936 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
RABGGTA-207ENST00000558936 STRCQ7RTU9 1775 aa19.56■□□□□ 0.72
RABGGTA-207ENST00000558936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.72
RABGGTA-207ENST00000558936 VWDEQ8N2E2 1590 aa19.55■□□□□ 0.72
RABGGTA-207ENST00000558936 ERBINQ96RT1 1412 aa19.55■□□□□ 0.72
RABGGTA-207ENST00000558936 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
RABGGTA-207ENST00000558936 PRDM15P57071 1507 aaPredicted RBP19.55■□□□□ 0.72
RABGGTA-207ENST00000558936 ANKRD30AQ9BXX3 1397 aa19.53■□□□□ 0.72
RABGGTA-207ENST00000558936 NPATQ14207 1427 aa19.52■□□□□ 0.72
RABGGTA-207ENST00000558936 CFAP65Q6ZU64 1925 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-207ENST00000558936 PZPP20742 1482 aa19.51■□□□□ 0.71
RABGGTA-207ENST00000558936 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
RABGGTA-207ENST00000558936 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
RABGGTA-207ENST00000558936 FAM135AQ9P2D6 1515 aa19.51■□□□□ 0.71
RABGGTA-207ENST00000558936 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
RABGGTA-207ENST00000558936 ZC3H13Q5T200 1668 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-207ENST00000558936 WASHC2CQ9Y4E1 1318 aa19.49■□□□□ 0.71
RABGGTA-207ENST00000558936 ROCK1Q13464 1354 aa19.48■□□□□ 0.71
RABGGTA-207ENST00000558936 ZNF142P52746 1687 aaPredicted RBP19.47■□□□□ 0.71
RABGGTA-207ENST00000558936 ITGAEP38570 1179 aa19.47■□□□□ 0.71
RABGGTA-207ENST00000558936 ANKRD50Q9ULJ7 1429 aa19.47■□□□□ 0.71
RABGGTA-207ENST00000558936 UHRF1BP1Q6BDS2 1440 aa19.46■□□□□ 0.71
RABGGTA-207ENST00000558936 SPATA31D1Q6ZQQ2 1576 aa19.45■□□□□ 0.7
RABGGTA-207ENST00000558936 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
RABGGTA-207ENST00000558936 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
RABGGTA-207ENST00000558936 UNC13BO14795 1591 aa19.43■□□□□ 0.7
RABGGTA-207ENST00000558936 ERVK-7P63135 1459 aa19.42■□□□□ 0.7
RABGGTA-207ENST00000558936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.79e-7■□□□□ 8.9
RABGGTA-207ENST00000558936 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
RABGGTA-207ENST00000558936 TNRQ92752 1358 aa19.39■□□□□ 0.69
RABGGTA-207ENST00000558936 NAIPQ13075 1403 aa19.39■□□□□ 0.69
RABGGTA-207ENST00000558936 SYNMO15061 1565 aa19.37■□□□□ 0.69
RABGGTA-207ENST00000558936 EFCAB6Q5THR3 1501 aa19.37■□□□□ 0.69
RABGGTA-207ENST00000558936 A2ML1A8K2U0 1454 aa19.37■□□□□ 0.69
RABGGTA-207ENST00000558936 GCC2Q8IWJ2 1684 aa19.36■□□□□ 0.69
RABGGTA-207ENST00000558936 E9PCH4 1651 aa19.34■□□□□ 0.69
RABGGTA-207ENST00000558936 IQGAP3Q86VI3 1631 aa19.34■□□□□ 0.69
RABGGTA-207ENST00000558936 NOS1P29475 1434 aa19.34■□□□□ 0.69
RABGGTA-207ENST00000558936 TET3O43151 1660 aa19.33■□□□□ 0.69
RABGGTA-207ENST00000558936 UBR1Q8IWV7 1749 aa19.33■□□□□ 0.68
RABGGTA-207ENST00000558936 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
RABGGTA-207ENST00000558936 NCKAP5LQ9HCH0 1330 aa19.32■□□□□ 0.68
RABGGTA-207ENST00000558936 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
RABGGTA-207ENST00000558936 PLA2R1Q13018 1463 aa19.29■□□□□ 0.68
RABGGTA-207ENST00000558936 NLRP1Q9C000 1473 aa19.29■□□□□ 0.68
RABGGTA-207ENST00000558936 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
RABGGTA-207ENST00000558936 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.68
RABGGTA-207ENST00000558936 KANK1Q14678 1352 aa19.27■□□□□ 0.68
RABGGTA-207ENST00000558936 MYO5BQ9ULV0 1848 aa19.26■□□□□ 0.67
RABGGTA-207ENST00000558936 IDI1Q13907 227 aa19.26■□□□□ 0.67
RABGGTA-207ENST00000558936 PTPRTO14522 1441 aa19.25■□□□□ 0.67
RABGGTA-207ENST00000558936 NUP155O75694 1391 aa19.25■□□□□ 0.67
RABGGTA-207ENST00000558936 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
RABGGTA-207ENST00000558936 LTBP4Q8N2S1 1624 aa19.23■□□□□ 0.67
RABGGTA-207ENST00000558936 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-207ENST00000558936 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
RABGGTA-207ENST00000558936 LTKP29376 864 aa19.21■□□□□ 0.67
RABGGTA-207ENST00000558936 SLIT1O75093 1534 aa19.2■□□□□ 0.66
RABGGTA-207ENST00000558936 TMEM131LA2VDJ0 1609 aa19.18■□□□□ 0.66
RABGGTA-207ENST00000558936 KDM5AP29375 1690 aaKnown RBP19.18■□□□□ 0.66
RABGGTA-207ENST00000558936 MED14O60244 1454 aa19.18■□□□□ 0.66
RABGGTA-207ENST00000558936 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
RABGGTA-207ENST00000558936 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
RABGGTA-207ENST00000558936 PKD2Q13563 968 aa19.16■□□□□ 0.66
RABGGTA-207ENST00000558936 THEMISQ8N1K5 641 aaPredicted RBP19.16■□□□□ 0.66
RABGGTA-207ENST00000558936 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
RABGGTA-207ENST00000558936 SPHKAPQ2M3C7 1700 aa19.15■□□□□ 0.66
RABGGTA-207ENST00000558936 ZNF335Q9H4Z2 1342 aaPredicted RBP19.14■□□□□ 0.65
RABGGTA-207ENST00000558936 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
RABGGTA-207ENST00000558936 IQGAP1P46940 1657 aa19.12■□□□□ 0.65
RABGGTA-207ENST00000558936 CLTCL1P53675 1640 aa19.11■□□□□ 0.65
RABGGTA-207ENST00000558936 ZFYVE9O95405 1425 aa19.11■□□□□ 0.65
RABGGTA-207ENST00000558936 ILDR1Q86SU0 546 aaPredicted RBP19.11■□□□□ 0.65
RABGGTA-207ENST00000558936 NPHP4O75161 1426 aaPredicted RBP19.1■□□□□ 0.65
RABGGTA-207ENST00000558936 FOXD1Q16676 465 aa19.1■□□□□ 0.65
RABGGTA-207ENST00000558936 ANKLE2Q86XL3 938 aa19.1■□□□□ 0.65
RABGGTA-207ENST00000558936 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
RABGGTA-207ENST00000558936 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
RABGGTA-207ENST00000558936 CERKQ8TCT0 537 aa19.08■□□□□ 0.64
RABGGTA-207ENST00000558936 SETD5Q9C0A6 1442 aa19.08■□□□□ 0.64
RABGGTA-207ENST00000558936 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
RABGGTA-207ENST00000558936 TRPM2O94759 1503 aa19.06■□□□□ 0.64
RABGGTA-207ENST00000558936 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
RABGGTA-207ENST00000558936 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
RABGGTA-207ENST00000558936 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.64
RABGGTA-207ENST00000558936 RIMS2Q9UQ26 1411 aa19.01■□□□□ 0.63
RABGGTA-207ENST00000558936 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
RABGGTA-207ENST00000558936 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
RABGGTA-207ENST00000558936 XIRP1Q702N8 1843 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms