RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
CDC42BPB-202ENST00000558321 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.65
CDC42BPB-202ENST00000558321 KDM5DQ9BY66 1539 aa19.13■□□□□ 0.65
CDC42BPB-202ENST00000558321 KIF15Q9NS87 1388 aa19.12■□□□□ 0.65
CDC42BPB-202ENST00000558321 DAPK1P53355 1430 aa19.11■□□□□ 0.65
CDC42BPB-202ENST00000558321 CERKQ8TCT0 537 aa19.11■□□□□ 0.65
CDC42BPB-202ENST00000558321 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
CDC42BPB-202ENST00000558321 TCOF1Q13428 1488 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-202ENST00000558321 TNRQ92752 1358 aa19.1■□□□□ 0.65
CDC42BPB-202ENST00000558321 NCKAP5LQ9HCH0 1330 aa19.1■□□□□ 0.65
CDC42BPB-202ENST00000558321 DUOX2Q9NRD8 1548 aa19.1■□□□□ 0.65
CDC42BPB-202ENST00000558321 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
CDC42BPB-202ENST00000558321 NCOA1Q15788 1441 aa19.09■□□□□ 0.65
CDC42BPB-202ENST00000558321 SHANK2Q9UPX8 1470 aa19.09■□□□□ 0.65
CDC42BPB-202ENST00000558321 PTPRTO14522 1441 aa19.08■□□□□ 0.65
CDC42BPB-202ENST00000558321 ANKRD30AQ9BXX3 1397 aa19.08■□□□□ 0.65
CDC42BPB-202ENST00000558321 CAMSAP1Q5T5Y3 1602 aa19.08■□□□□ 0.65
CDC42BPB-202ENST00000558321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.645e-6■□□□□ 8.1
CDC42BPB-202ENST00000558321 PZPP20742 1482 aa19.08■□□□□ 0.64
CDC42BPB-202ENST00000558321 MYO3AQ8NEV4 1616 aa19.07■□□□□ 0.64
CDC42BPB-202ENST00000558321 PKD2Q13563 968 aa19.06■□□□□ 0.64
CDC42BPB-202ENST00000558321 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
CDC42BPB-202ENST00000558321 CEP170BQ9Y4F5 1589 aaPredicted RBP19.06■□□□□ 0.64
CDC42BPB-202ENST00000558321 DNMT1P26358 1616 aaKnown RBP19.05■□□□□ 0.64
CDC42BPB-202ENST00000558321 EIF2AK4Q9P2K8 1649 aaKnown RBP19.05■□□□□ 0.64
CDC42BPB-202ENST00000558321 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
CDC42BPB-202ENST00000558321 RNF17Q9BXT8 1623 aaKnown RBP19.04■□□□□ 0.64
CDC42BPB-202ENST00000558321 ERBINQ96RT1 1412 aa19.03■□□□□ 0.64
CDC42BPB-202ENST00000558321 CROCC2H7BZ55 1655 aa19.03■□□□□ 0.64
CDC42BPB-202ENST00000558321 ABCC3O15438 1527 aa19.03■□□□□ 0.64
CDC42BPB-202ENST00000558321 THEMISQ8N1K5 641 aaPredicted RBP19.02■□□□□ 0.64
CDC42BPB-202ENST00000558321 KANK1Q14678 1352 aa19.02■□□□□ 0.64
CDC42BPB-202ENST00000558321 ZNF142P52746 1687 aaPredicted RBP19.01■□□□□ 0.63
CDC42BPB-202ENST00000558321 PLA2R1Q13018 1463 aa19■□□□□ 0.63
CDC42BPB-202ENST00000558321 ZC3H13Q5T200 1668 aaKnown RBP18.98■□□□□ 0.63
CDC42BPB-202ENST00000558321 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
CDC42BPB-202ENST00000558321 MROH1Q8NDA8 1641 aa18.97■□□□□ 0.63
CDC42BPB-202ENST00000558321 ANKLE2Q86XL3 938 aa18.97■□□□□ 0.63
CDC42BPB-202ENST00000558321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDC42BPB-202ENST00000558321 ITGAEP38570 1179 aa18.95■□□□□ 0.62
CDC42BPB-202ENST00000558321 ERVK-7P63135 1459 aa18.94■□□□□ 0.62
CDC42BPB-202ENST00000558321 ZNF335Q9H4Z2 1342 aaPredicted RBP18.94■□□□□ 0.62
CDC42BPB-202ENST00000558321 CEP152O94986 1710 aa18.94■□□□□ 0.62
CDC42BPB-202ENST00000558321 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
CDC42BPB-202ENST00000558321 ADGRL2O95490 1459 aa18.93■□□□□ 0.62
CDC42BPB-202ENST00000558321 PRDM15P57071 1507 aaPredicted RBP18.93■□□□□ 0.62
CDC42BPB-202ENST00000558321 SPATA31D1Q6ZQQ2 1576 aa18.92■□□□□ 0.62
CDC42BPB-202ENST00000558321 ARHGAP31Q2M1Z3 1444 aa18.91■□□□□ 0.62
CDC42BPB-202ENST00000558321 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
CDC42BPB-202ENST00000558321 STAG3Q9UJ98 1225 aa18.89■□□□□ 0.61
CDC42BPB-202ENST00000558321 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
CDC42BPB-202ENST00000558321 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
CDC42BPB-202ENST00000558321 LTBP4Q8N2S1 1624 aa18.88■□□□□ 0.61
CDC42BPB-202ENST00000558321 ROCK1Q13464 1354 aa18.85■□□□□ 0.61
CDC42BPB-202ENST00000558321 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-202ENST00000558321 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
CDC42BPB-202ENST00000558321 IDI1Q13907 227 aa18.83■□□□□ 0.6
CDC42BPB-202ENST00000558321 TXNDC2Q86VQ3 553 aa18.83■□□□□ 0.6
CDC42BPB-202ENST00000558321 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
CDC42BPB-202ENST00000558321 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.6
CDC42BPB-202ENST00000558321 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
CDC42BPB-202ENST00000558321 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
CDC42BPB-202ENST00000558321 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
CDC42BPB-202ENST00000558321 IQSEC2Q5JU85 1478 aa18.81■□□□□ 0.6
CDC42BPB-202ENST00000558321 MED14O60244 1454 aa18.79■□□□□ 0.6
CDC42BPB-202ENST00000558321 LTKP29376 864 aa18.78■□□□□ 0.6
CDC42BPB-202ENST00000558321 SLC52A1Q9NWF4 448 aa18.78■□□□□ 0.6
CDC42BPB-202ENST00000558321 EFCAB6Q5THR3 1501 aa18.78■□□□□ 0.6
CDC42BPB-202ENST00000558321 UBR1Q8IWV7 1749 aa18.77■□□□□ 0.6
CDC42BPB-202ENST00000558321 NUP155O75694 1391 aa18.76■□□□□ 0.59
CDC42BPB-202ENST00000558321 SCAF11Q99590 1463 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-202ENST00000558321 NOS1P29475 1434 aa18.75■□□□□ 0.59
CDC42BPB-202ENST00000558321 TMEM2Q9UHN6 1383 aa18.75■□□□□ 0.59
CDC42BPB-202ENST00000558321 PIK3C2BO00750 1634 aa18.74■□□□□ 0.59
CDC42BPB-202ENST00000558321 RPRD2Q5VT52 1461 aaKnown RBP18.74■□□□□ 0.59
CDC42BPB-202ENST00000558321 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-202ENST00000558321 SLIT1O75093 1534 aa18.73■□□□□ 0.59
CDC42BPB-202ENST00000558321 CPS1P31327 1500 aa18.73■□□□□ 0.59
CDC42BPB-202ENST00000558321 RRBP1Q9P2E9 1410 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-202ENST00000558321 IQGAP1P46940 1657 aa18.73■□□□□ 0.59
CDC42BPB-202ENST00000558321 SYNMO15061 1565 aa18.72■□□□□ 0.59
CDC42BPB-202ENST00000558321 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
CDC42BPB-202ENST00000558321 BCANQ96GW7 911 aa18.72■□□□□ 0.59
CDC42BPB-202ENST00000558321 UNC13BO14795 1591 aa18.71■□□□□ 0.59
CDC42BPB-202ENST00000558321 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-202ENST00000558321 TET3O43151 1660 aa18.7■□□□□ 0.58
CDC42BPB-202ENST00000558321 TOM1O60784 492 aa18.7■□□□□ 0.58
CDC42BPB-202ENST00000558321 HDGFP51858 240 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-202ENST00000558321 PIP4K2BP78356 416 aa18.68■□□□□ 0.58
CDC42BPB-202ENST00000558321 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
CDC42BPB-202ENST00000558321 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
CDC42BPB-202ENST00000558321 ADGRB3O60242 1522 aa18.66■□□□□ 0.58
CDC42BPB-202ENST00000558321 SLC26A8Q96RN1 970 aa18.66■□□□□ 0.58
CDC42BPB-202ENST00000558321 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
CDC42BPB-202ENST00000558321 KDM5AP29375 1690 aaKnown RBP18.65■□□□□ 0.58
CDC42BPB-202ENST00000558321 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
CDC42BPB-202ENST00000558321 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
CDC42BPB-202ENST00000558321 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDC42BPB-202ENST00000558321 NAIPQ13075 1403 aa18.62■□□□□ 0.57
CDC42BPB-202ENST00000558321 E9PCH4 1651 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms