RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TSPY4P0CV99 314 aa13.75□□□□□ -0.21
SNRPA1-206ENST00000558059 TSPY10P0CW01 314 aa13.75□□□□□ -0.21
SNRPA1-206ENST00000558059 GGT6Q6P531 493 aa13.74□□□□□ -0.21
SNRPA1-206ENST00000558059 PREX1Q8TCU6 1659 aa13.74□□□□□ -0.21
SNRPA1-206ENST00000558059 MROH2AA6NES4 1674 aa13.72□□□□□ -0.21
SNRPA1-206ENST00000558059 ZMYM3Q14202 1370 aa13.72□□□□□ -0.21
SNRPA1-206ENST00000558059 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
SNRPA1-206ENST00000558059 CLTCQ00610 1675 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-206ENST00000558059 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.22
SNRPA1-206ENST00000558059 KIF3BO15066 747 aa13.7□□□□□ -0.22
SNRPA1-206ENST00000558059 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
SNRPA1-206ENST00000558059 UHRF1BP1Q6BDS2 1440 aa13.69□□□□□ -0.22
SNRPA1-206ENST00000558059 ABCC5O15440 1437 aa13.68□□□□□ -0.22
SNRPA1-206ENST00000558059 NPATQ14207 1427 aa13.68□□□□□ -0.22
SNRPA1-206ENST00000558059 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-206ENST00000558059 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
SNRPA1-206ENST00000558059 CROCC2H7BZ55 1655 aa13.66□□□□□ -0.22
SNRPA1-206ENST00000558059 STRCQ7RTU9 1775 aa13.65□□□□□ -0.22
SNRPA1-206ENST00000558059 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-206ENST00000558059 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
SNRPA1-206ENST00000558059 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-206ENST00000558059 DAPK1P53355 1430 aa13.64□□□□□ -0.23
SNRPA1-206ENST00000558059 RNF17Q9BXT8 1623 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-206ENST00000558059 FAM135AQ9P2D6 1515 aa13.63□□□□□ -0.23
SNRPA1-206ENST00000558059 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
SNRPA1-206ENST00000558059 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-206ENST00000558059 KDM5DQ9BY66 1539 aa13.62□□□□□ -0.23
SNRPA1-206ENST00000558059 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
SNRPA1-206ENST00000558059 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
SNRPA1-206ENST00000558059 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
SNRPA1-206ENST00000558059 RRP7BPQ9NSQ0 103 aa13.61□□□□□ -0.23
SNRPA1-206ENST00000558059 FBXO31Q5XUX0 539 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-206ENST00000558059 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
SNRPA1-206ENST00000558059 MROH1Q8NDA8 1641 aa13.6□□□□□ -0.23
SNRPA1-206ENST00000558059 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-206ENST00000558059 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
SNRPA1-206ENST00000558059 PZPP20742 1482 aa13.59□□□□□ -0.23
SNRPA1-206ENST00000558059 ZNF142P52746 1687 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-206ENST00000558059 CFAP65Q6ZU64 1925 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-206ENST00000558059 ABCC3O15438 1527 aa13.58□□□□□ -0.24
SNRPA1-206ENST00000558059 NCOA1Q15788 1441 aa13.57□□□□□ -0.24
SNRPA1-206ENST00000558059 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-206ENST00000558059 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-206ENST00000558059 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
SNRPA1-206ENST00000558059 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
SNRPA1-206ENST00000558059 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
SNRPA1-206ENST00000558059 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-206ENST00000558059 TNRQ92752 1358 aa13.56□□□□□ -0.24
SNRPA1-206ENST00000558059 CEP152O94986 1710 aa13.56□□□□□ -0.24
SNRPA1-206ENST00000558059 ADGRL2O95490 1459 aa13.55□□□□□ -0.24
SNRPA1-206ENST00000558059 PTPRTO14522 1441 aa13.55□□□□□ -0.24
SNRPA1-206ENST00000558059 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
SNRPA1-206ENST00000558059 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-206ENST00000558059 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
SNRPA1-206ENST00000558059 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
SNRPA1-206ENST00000558059 PLA2R1Q13018 1463 aa13.52□□□□□ -0.25
SNRPA1-206ENST00000558059 SPATA31D1Q6ZQQ2 1576 aa13.5□□□□□ -0.25
SNRPA1-206ENST00000558059 ERVK-7P63135 1459 aa13.5□□□□□ -0.25
SNRPA1-206ENST00000558059 PKD2Q13563 968 aa13.5□□□□□ -0.25
SNRPA1-206ENST00000558059 CERKQ8TCT0 537 aa13.5□□□□□ -0.25
SNRPA1-206ENST00000558059 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
SNRPA1-206ENST00000558059 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-206ENST00000558059 NLRP1Q9C000 1473 aa13.49□□□□□ -0.25
SNRPA1-206ENST00000558059 ARHGAP31Q2M1Z3 1444 aa13.49□□□□□ -0.25
SNRPA1-206ENST00000558059 DSG3P32926 999 aa13.49□□□□□ -0.25
SNRPA1-206ENST00000558059 VWDEQ8N2E2 1590 aa13.49□□□□□ -0.25
SNRPA1-206ENST00000558059 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
SNRPA1-206ENST00000558059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNRPA1-206ENST00000558059 KANK1Q14678 1352 aa13.47□□□□□ -0.25
SNRPA1-206ENST00000558059 LMTK2Q8IWU2 1503 aa13.47□□□□□ -0.25
SNRPA1-206ENST00000558059 ROCK1Q13464 1354 aa13.46□□□□□ -0.25
SNRPA1-206ENST00000558059 THEMISQ8N1K5 641 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-206ENST00000558059 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
SNRPA1-206ENST00000558059 LTBP4Q8N2S1 1624 aa13.45□□□□□ -0.26
SNRPA1-206ENST00000558059 ITGAEP38570 1179 aa13.44□□□□□ -0.26
SNRPA1-206ENST00000558059 POLR1AO95602 1720 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-206ENST00000558059 CAPN15O75808 1086 aa13.43□□□□□ -0.26
SNRPA1-206ENST00000558059 ANKLE2Q86XL3 938 aa13.43□□□□□ -0.26
SNRPA1-206ENST00000558059 NEURL4Q96JN8 1562 aa13.43□□□□□ -0.26
SNRPA1-206ENST00000558059 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-206ENST00000558059 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
SNRPA1-206ENST00000558059 EFCAB6Q5THR3 1501 aa13.42□□□□□ -0.26
SNRPA1-206ENST00000558059 ZNF335Q9H4Z2 1342 aaPredicted RBP13.41□□□□□ -0.26
SNRPA1-206ENST00000558059 UNC13BO14795 1591 aa13.41□□□□□ -0.26
SNRPA1-206ENST00000558059 NOS1P29475 1434 aa13.39□□□□□ -0.27
SNRPA1-206ENST00000558059 IDI1Q13907 227 aa13.39□□□□□ -0.27
SNRPA1-206ENST00000558059 MED14O60244 1454 aa13.39□□□□□ -0.27
SNRPA1-206ENST00000558059 TET3O43151 1660 aa13.39□□□□□ -0.27
SNRPA1-206ENST00000558059 PIK3C2BO00750 1634 aa13.39□□□□□ -0.27
SNRPA1-206ENST00000558059 SYNMO15061 1565 aa13.38□□□□□ -0.27
SNRPA1-206ENST00000558059 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-206ENST00000558059 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
SNRPA1-206ENST00000558059 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-206ENST00000558059 GCC2Q8IWJ2 1684 aa13.37□□□□□ -0.27
SNRPA1-206ENST00000558059 SLIT1O75093 1534 aa13.36□□□□□ -0.27
SNRPA1-206ENST00000558059 LTKP29376 864 aa13.36□□□□□ -0.27
SNRPA1-206ENST00000558059 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
SNRPA1-206ENST00000558059 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
SNRPA1-206ENST00000558059 KDM5AP29375 1690 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-206ENST00000558059 IQGAP1P46940 1657 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms