RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 FBXO31Q5XUX0 539 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC6B-207ENST00000557764 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
TRAPPC6B-207ENST00000557764 ADGBQ8N7X0 1667 aa23.78■■□□□ 1.4
TRAPPC6B-207ENST00000557764 GPATCH8Q9UKJ3 1502 aaKnown RBP23.77■■□□□ 1.4
TRAPPC6B-207ENST00000557764 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
TRAPPC6B-207ENST00000557764 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
TRAPPC6B-207ENST00000557764 KIAA1107Q9UPP5 1409 aa23.76■■□□□ 1.39
TRAPPC6B-207ENST00000557764 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
TRAPPC6B-207ENST00000557764 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
TRAPPC6B-207ENST00000557764 THEMISQ8N1K5 641 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC6B-207ENST00000557764 CASKIN1Q8WXD9 1431 aa23.74■■□□□ 1.39
TRAPPC6B-207ENST00000557764 MED14O60244 1454 aa23.74■■□□□ 1.39
TRAPPC6B-207ENST00000557764 PLEKHH2Q8IVE3 1493 aa23.73■■□□□ 1.39
TRAPPC6B-207ENST00000557764 DEPDC5O75140 1603 aa23.73■■□□□ 1.39
TRAPPC6B-207ENST00000557764 IQGAP1P46940 1657 aa23.72■■□□□ 1.39
TRAPPC6B-207ENST00000557764 POTEAQ6S8J7 498 aa23.7■■□□□ 1.38
TRAPPC6B-207ENST00000557764 CFDP1Q9UEE9 299 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC6B-207ENST00000557764 PZPP20742 1482 aa23.69■■□□□ 1.38
TRAPPC6B-207ENST00000557764 UGGT1Q9NYU2 1555 aa23.69■■□□□ 1.38
TRAPPC6B-207ENST00000557764 SYNMO15061 1565 aa23.68■■□□□ 1.38
TRAPPC6B-207ENST00000557764 FAM135AQ9P2D6 1515 aa23.67■■□□□ 1.38
TRAPPC6B-207ENST00000557764 NLRP1Q9C000 1473 aa23.65■■□□□ 1.38
TRAPPC6B-207ENST00000557764 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
TRAPPC6B-207ENST00000557764 DHX29Q7Z478 1369 aaKnown RBP23.64■■□□□ 1.37
TRAPPC6B-207ENST00000557764 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.37
TRAPPC6B-207ENST00000557764 KIF3BO15066 747 aa23.63■■□□□ 1.37
TRAPPC6B-207ENST00000557764 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
TRAPPC6B-207ENST00000557764 WASHC2CQ9Y4E1 1318 aa23.61■■□□□ 1.37
TRAPPC6B-207ENST00000557764 SETD1AO15047 1707 aaKnown RBP23.6■■□□□ 1.37
TRAPPC6B-207ENST00000557764 ZNF644Q9H582 1327 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC6B-207ENST00000557764 FYCO1Q9BQS8 1478 aa23.58■■□□□ 1.37
TRAPPC6B-207ENST00000557764 RTEL1-TNFRSF6BF6WH68 1400 aa23.58■■□□□ 1.36
TRAPPC6B-207ENST00000557764 XIRP1Q702N8 1843 aaKnown RBP23.56■■□□□ 1.36
TRAPPC6B-207ENST00000557764 ZC3H13Q5T200 1668 aaKnown RBP23.55■■□□□ 1.36
TRAPPC6B-207ENST00000557764 MBD5Q9P267 1494 aa23.55■■□□□ 1.36
TRAPPC6B-207ENST00000557764 FAM135BQ49AJ0 1406 aa23.51■■□□□ 1.35
TRAPPC6B-207ENST00000557764 TIAM1Q13009 1591 aa23.46■■□□□ 1.35
TRAPPC6B-207ENST00000557764 SCAF11Q99590 1463 aaKnown RBP23.44■■□□□ 1.34
TRAPPC6B-207ENST00000557764 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
TRAPPC6B-207ENST00000557764 UBR1Q8IWV7 1749 aa23.44■■□□□ 1.34
TRAPPC6B-207ENST00000557764 ROBO1Q9Y6N7 1651 aa23.44■■□□□ 1.34
TRAPPC6B-207ENST00000557764 CFAP65Q6ZU64 1925 aaKnown RBP23.42■■□□□ 1.34
TRAPPC6B-207ENST00000557764 LTKP29376 864 aa23.41■■□□□ 1.34
TRAPPC6B-207ENST00000557764 TXNDC2Q86VQ3 553 aa23.4■■□□□ 1.34
TRAPPC6B-207ENST00000557764 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
TRAPPC6B-207ENST00000557764 CCDC141Q6ZP82 1450 aa23.4■■□□□ 1.34
TRAPPC6B-207ENST00000557764 ERVK-7P63135 1459 aa23.39■■□□□ 1.34
TRAPPC6B-207ENST00000557764 ABCC3O15438 1527 aa23.38■■□□□ 1.33
TRAPPC6B-207ENST00000557764 TMEM94Q12767 1356 aa23.36■■□□□ 1.33
TRAPPC6B-207ENST00000557764 SRCAPQ6ZRS2 3230 aa23.36■■□□□ 1.33
TRAPPC6B-207ENST00000557764 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
TRAPPC6B-207ENST00000557764 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
TRAPPC6B-207ENST00000557764 SLIT1O75093 1534 aa23.33■■□□□ 1.33
TRAPPC6B-207ENST00000557764 RSPH4AQ5TD94 716 aa23.33■■□□□ 1.33
TRAPPC6B-207ENST00000557764 EID1Q9Y6B2 187 aa23.32■■□□□ 1.32
TRAPPC6B-207ENST00000557764 PHLPP1O60346 1717 aa23.32■■□□□ 1.32
TRAPPC6B-207ENST00000557764 ADRA2BP18089 450 aa23.31■■□□□ 1.32
TRAPPC6B-207ENST00000557764 RBM33Q96EV2 1170 aaKnown RBP23.31■■□□□ 1.32
TRAPPC6B-207ENST00000557764 CAMSAP2Q08AD1 1489 aa23.3■■□□□ 1.32
TRAPPC6B-207ENST00000557764 TRIM52Q96A61 297 aa23.3■■□□□ 1.32
TRAPPC6B-207ENST00000557764 JCADQ9P266 1359 aa23.29■■□□□ 1.32
TRAPPC6B-207ENST00000557764 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
TRAPPC6B-207ENST00000557764 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
TRAPPC6B-207ENST00000557764 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
TRAPPC6B-207ENST00000557764 CEP152O94986 1710 aa23.28■■□□□ 1.32
TRAPPC6B-207ENST00000557764 PROSER2Q86WR7 435 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC6B-207ENST00000557764 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
TRAPPC6B-207ENST00000557764 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
TRAPPC6B-207ENST00000557764 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
TRAPPC6B-207ENST00000557764 KCNA6P17658 529 aa23.26■■□□□ 1.31
TRAPPC6B-207ENST00000557764 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
TRAPPC6B-207ENST00000557764 ZNF772Q68DY9 489 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC6B-207ENST00000557764 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
TRAPPC6B-207ENST00000557764 MEX3CQ5U5Q3 659 aaKnown RBP23.22■■□□□ 1.31
TRAPPC6B-207ENST00000557764 SLAIN2Q9P270 581 aa23.22■■□□□ 1.31
TRAPPC6B-207ENST00000557764 TMEM2Q9UHN6 1383 aa23.21■■□□□ 1.31
TRAPPC6B-207ENST00000557764 LRP6O75581 1613 aa23.21■■□□□ 1.31
TRAPPC6B-207ENST00000557764 EIF2AK4Q9P2K8 1649 aaKnown RBP23.21■■□□□ 1.31
TRAPPC6B-207ENST00000557764 PIK3C2BO00750 1634 aa23.2■■□□□ 1.3
TRAPPC6B-207ENST00000557764 PRDM15P57071 1507 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC6B-207ENST00000557764 SLC26A8Q96RN1 970 aa23.2■■□□□ 1.3
TRAPPC6B-207ENST00000557764 MSH6P52701 1360 aa23.19■■□□□ 1.3
TRAPPC6B-207ENST00000557764 COL16A1Q07092 1604 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC6B-207ENST00000557764 STAG3Q9UJ98 1225 aa23.17■■□□□ 1.3
TRAPPC6B-207ENST00000557764 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
TRAPPC6B-207ENST00000557764 RXRBP28702 533 aa23.16■■□□□ 1.3
TRAPPC6B-207ENST00000557764 TET3O43151 1660 aa23.16■■□□□ 1.3
TRAPPC6B-207ENST00000557764 NKTRP30414 1462 aaKnown RBP23.15■■□□□ 1.3
TRAPPC6B-207ENST00000557764 ARHGAP31Q2M1Z3 1444 aa23.13■■□□□ 1.29
TRAPPC6B-207ENST00000557764 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
TRAPPC6B-207ENST00000557764 MAST1Q9Y2H9 1570 aa23.13■■□□□ 1.29
TRAPPC6B-207ENST00000557764 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
TRAPPC6B-207ENST00000557764 EFCAB6Q5THR3 1501 aa23.11■■□□□ 1.29
TRAPPC6B-207ENST00000557764 KDM5AP29375 1690 aaKnown RBP23.09■■□□□ 1.29
TRAPPC6B-207ENST00000557764 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC6B-207ENST00000557764 SHPRHQ149N8 1683 aa23.08■■□□□ 1.29
TRAPPC6B-207ENST00000557764 BCANQ96GW7 911 aa23.07■■□□□ 1.28
TRAPPC6B-207ENST00000557764 IDI1Q13907 227 aa23.06■■□□□ 1.28
TRAPPC6B-207ENST00000557764 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
TRAPPC6B-207ENST00000557764 CHD2O14647 1828 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms