RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
LINC00648-204ENST00000557749 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
LINC00648-204ENST00000557749 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
LINC00648-204ENST00000557749 ATP7AQ04656 1500 aa17.92■□□□□ 0.46
LINC00648-204ENST00000557749 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC00648-204ENST00000557749 MLECQ14165 292 aa17.91■□□□□ 0.46
LINC00648-204ENST00000557749 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.46
LINC00648-204ENST00000557749 SIGLEC1Q9BZZ2 1709 aa17.89■□□□□ 0.46
LINC00648-204ENST00000557749 INO80Q9ULG1 1556 aaPredicted RBP17.89■□□□□ 0.45
LINC00648-204ENST00000557749 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
LINC00648-204ENST00000557749 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
LINC00648-204ENST00000557749 CCDC141Q6ZP82 1450 aa17.87■□□□□ 0.45
LINC00648-204ENST00000557749 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
LINC00648-204ENST00000557749 CAMSAP2Q08AD1 1489 aa17.86■□□□□ 0.45
LINC00648-204ENST00000557749 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
LINC00648-204ENST00000557749 A2MP01023 1474 aa17.85■□□□□ 0.45
LINC00648-204ENST00000557749 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
LINC00648-204ENST00000557749 ARHGEF5Q12774 1597 aa17.83■□□□□ 0.45
LINC00648-204ENST00000557749 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
LINC00648-204ENST00000557749 MYOM3Q5VTT5 1437 aa17.82■□□□□ 0.44
LINC00648-204ENST00000557749 TSPY4P0CV99 314 aa17.82■□□□□ 0.44
LINC00648-204ENST00000557749 TSPY10P0CW01 314 aa17.82■□□□□ 0.44
LINC00648-204ENST00000557749 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
LINC00648-204ENST00000557749 LMTK3Q96Q04 1460 aa17.81■□□□□ 0.44
LINC00648-204ENST00000557749 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
LINC00648-204ENST00000557749 SETD1BQ9UPS6 1966 aaKnown RBP17.79■□□□□ 0.44
LINC00648-204ENST00000557749 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.44
LINC00648-204ENST00000557749 MROH2AA6NES4 1674 aa17.77■□□□□ 0.44
LINC00648-204ENST00000557749 PREX1Q8TCU6 1659 aa17.77■□□□□ 0.44
LINC00648-204ENST00000557749 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
LINC00648-204ENST00000557749 DHX29Q7Z478 1369 aaKnown RBP17.77■□□□□ 0.43
LINC00648-204ENST00000557749 UHRF1BP1Q6BDS2 1440 aa17.75■□□□□ 0.43
LINC00648-204ENST00000557749 NPATQ14207 1427 aa17.74■□□□□ 0.43
LINC00648-204ENST00000557749 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
LINC00648-204ENST00000557749 C3P01024 1663 aa17.73■□□□□ 0.43
LINC00648-204ENST00000557749 GGT6Q6P531 493 aa17.7■□□□□ 0.42
LINC00648-204ENST00000557749 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
LINC00648-204ENST00000557749 ZMYM3Q14202 1370 aa17.69■□□□□ 0.42
LINC00648-204ENST00000557749 CEBPAP49715 358 aaPredicted RBP17.69■□□□□ 0.42
LINC00648-204ENST00000557749 FGD6Q6ZV73 1430 aa17.68■□□□□ 0.42
LINC00648-204ENST00000557749 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
LINC00648-204ENST00000557749 KIF3BO15066 747 aa17.66■□□□□ 0.42
LINC00648-204ENST00000557749 CLTCQ00610 1675 aaKnown RBP17.66■□□□□ 0.42
LINC00648-204ENST00000557749 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
LINC00648-204ENST00000557749 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
LINC00648-204ENST00000557749 TCOF1Q13428 1488 aaKnown RBP17.65■□□□□ 0.42
LINC00648-204ENST00000557749 HSPA2P54652 639 aa17.64■□□□□ 0.41
LINC00648-204ENST00000557749 DUOX2Q9NRD8 1548 aa17.63■□□□□ 0.41
LINC00648-204ENST00000557749 WASHC2CQ9Y4E1 1318 aa17.62■□□□□ 0.41
LINC00648-204ENST00000557749 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
LINC00648-204ENST00000557749 CROCC2H7BZ55 1655 aa17.61■□□□□ 0.41
LINC00648-204ENST00000557749 DAPK1P53355 1430 aa17.6■□□□□ 0.41
LINC00648-204ENST00000557749 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
LINC00648-204ENST00000557749 ERBINQ96RT1 1412 aa17.6■□□□□ 0.41
LINC00648-204ENST00000557749 RNF17Q9BXT8 1623 aaKnown RBP17.6■□□□□ 0.41
LINC00648-204ENST00000557749 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
LINC00648-204ENST00000557749 ABCC5O15440 1437 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 ANKRD30AQ9BXX3 1397 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 PZPP20742 1482 aa17.58■□□□□ 0.41
LINC00648-204ENST00000557749 ZNF142P52746 1687 aaPredicted RBP17.56■□□□□ 0.4
LINC00648-204ENST00000557749 MYO3AQ8NEV4 1616 aa17.55■□□□□ 0.4
LINC00648-204ENST00000557749 PTPRTO14522 1441 aa17.54■□□□□ 0.4
LINC00648-204ENST00000557749 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
LINC00648-204ENST00000557749 PLA2R1Q13018 1463 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 SPDYE1Q8NFV5 336 aaPredicted RBP17.53■□□□□ 0.4
LINC00648-204ENST00000557749 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 KANK1Q14678 1352 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 TNRQ92752 1358 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
LINC00648-204ENST00000557749 ABCC3O15438 1527 aa17.52■□□□□ 0.39
LINC00648-204ENST00000557749 A2ML1A8K2U0 1454 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 ADGRL2O95490 1459 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 NLRP1Q9C000 1473 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 PKD2Q13563 968 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
LINC00648-204ENST00000557749 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
LINC00648-204ENST00000557749 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
LINC00648-204ENST00000557749 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
LINC00648-204ENST00000557749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC00648-204ENST00000557749 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 MROH1Q8NDA8 1641 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
LINC00648-204ENST00000557749 ILDR1Q86SU0 546 aaPredicted RBP17.45■□□□□ 0.38
LINC00648-204ENST00000557749 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
LINC00648-204ENST00000557749 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
LINC00648-204ENST00000557749 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
LINC00648-204ENST00000557749 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
LINC00648-204ENST00000557749 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
LINC00648-204ENST00000557749 ANKRD50Q9ULJ7 1429 aa17.42■□□□□ 0.38
LINC00648-204ENST00000557749 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
LINC00648-204ENST00000557749 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
LINC00648-204ENST00000557749 CEP152O94986 1710 aa17.41■□□□□ 0.38
LINC00648-204ENST00000557749 CERKQ8TCT0 537 aa17.41■□□□□ 0.38
LINC00648-204ENST00000557749 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
LINC00648-204ENST00000557749 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
LINC00648-204ENST00000557749 CHRDL2Q6WN34 429 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms