RNA–Protein interactions for RNA: ENST00000557597.5

NUMB-229, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUMB, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-229ENST00000557597 DISP3Q9P2K9 1392 aa9.78□□□□□ -0.84
NUMB-229ENST00000557597 TCOF1Q13428 1488 aaKnown RBP9.78□□□□□ -0.84
NUMB-229ENST00000557597 A2MP01023 1474 aa9.78□□□□□ -0.84
NUMB-229ENST00000557597 CLTCQ00610 1675 aaKnown RBP9.77□□□□□ -0.84
NUMB-229ENST00000557597 CPS1P31327 1500 aa9.77□□□□□ -0.84
NUMB-229ENST00000557597 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.84
NUMB-229ENST00000557597 SYCP2Q9BX26 1530 aa9.77□□□□□ -0.85
NUMB-229ENST00000557597 GPATCH8Q9UKJ3 1502 aaKnown RBP9.76□□□□□ -0.85
NUMB-229ENST00000557597 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
NUMB-229ENST00000557597 SPAG9O60271 1321 aaKnown RBP9.76□□□□□ -0.85
NUMB-229ENST00000557597 RANGAP1P46060 587 aaPredicted RBP9.76□□□□□ -0.85
NUMB-229ENST00000557597 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
NUMB-229ENST00000557597 PTPRKQ15262 1439 aa9.76□□□□□ -0.85
NUMB-229ENST00000557597 ZMYM3Q14202 1370 aa9.76□□□□□ -0.85
NUMB-229ENST00000557597 EHBP1L1Q8N3D4 1523 aa9.75□□□□□ -0.85
NUMB-229ENST00000557597 CEBPAP49715 358 aaPredicted RBP9.75□□□□□ -0.85
NUMB-229ENST00000557597 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
NUMB-229ENST00000557597 PLPPR3Q6T4P5 718 aa9.74□□□□□ -0.85
NUMB-229ENST00000557597 MSH5O43196 834 aa9.73□□□□□ -0.85
NUMB-229ENST00000557597 RSPH4AQ5TD94 716 aa9.73□□□□□ -0.85
NUMB-229ENST00000557597 DEPDC5O75140 1603 aa9.73□□□□□ -0.85
NUMB-229ENST00000557597 CCNB3Q8WWL7 1395 aa9.72□□□□□ -0.85
NUMB-229ENST00000557597 ZC3H13Q5T200 1668 aaKnown RBP9.72□□□□□ -0.85
NUMB-229ENST00000557597 KDM5DQ9BY66 1539 aa9.72□□□□□ -0.85
NUMB-229ENST00000557597 DNMT1P26358 1616 aaKnown RBP9.71□□□□□ -0.85
NUMB-229ENST00000557597 NLRP1Q9C000 1473 aa9.71□□□□□ -0.85
NUMB-229ENST00000557597 APLP2Q06481 763 aa9.71□□□□□ -0.86
NUMB-229ENST00000557597 PZPP20742 1482 aa9.7□□□□□ -0.86
NUMB-229ENST00000557597 ARHGEF5Q12774 1597 aa9.7□□□□□ -0.86
NUMB-229ENST00000557597 SYNMO15061 1565 aa9.7□□□□□ -0.86
NUMB-229ENST00000557597 TIAM1Q13009 1591 aa9.69□□□□□ -0.86
NUMB-229ENST00000557597 DHX29Q7Z478 1369 aaKnown RBP9.69□□□□□ -0.86
NUMB-229ENST00000557597 EIF2AK4Q9P2K8 1649 aaKnown RBP9.69□□□□□ -0.86
NUMB-229ENST00000557597 CFDP1Q9UEE9 299 aaPredicted RBP9.69□□□□□ -0.86
NUMB-229ENST00000557597 MED14O60244 1454 aa9.69□□□□□ -0.86
NUMB-229ENST00000557597 MAST1Q9Y2H9 1570 aa9.68□□□□□ -0.86
NUMB-229ENST00000557597 TRIM52Q96A61 297 aa9.68□□□□□ -0.86
NUMB-229ENST00000557597 CCDC141Q6ZP82 1450 aa9.68□□□□□ -0.86
NUMB-229ENST00000557597 RNF17Q9BXT8 1623 aaKnown RBP9.67□□□□□ -0.86
NUMB-229ENST00000557597 MBD5Q9P267 1494 aa9.67□□□□□ -0.86
NUMB-229ENST00000557597 MTUS2Q5JR59 1369 aa9.67□□□□□ -0.86
NUMB-229ENST00000557597 ANO8Q9HCE9 1232 aaPredicted RBP9.67□□□□□ -0.86
NUMB-229ENST00000557597 NEURL4Q96JN8 1562 aa9.67□□□□□ -0.86
NUMB-229ENST00000557597 DEKP35659 375 aaKnown RBP9.66□□□□□ -0.86
NUMB-229ENST00000557597 TNRQ92752 1358 aa9.66□□□□□ -0.86
NUMB-229ENST00000557597 ILDR2Q71H61 639 aa9.66□□□□□ -0.86
NUMB-229ENST00000557597 SHANK2Q9UPX8 1470 aa9.65□□□□□ -0.86
NUMB-229ENST00000557597 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
NUMB-229ENST00000557597 TOM1O60784 492 aa9.64□□□□□ -0.87
NUMB-229ENST00000557597 MED1Q15648 1581 aaPredicted RBP9.64□□□□□ -0.87
NUMB-229ENST00000557597 VWDEQ8N2E2 1590 aa9.64□□□□□ -0.87
NUMB-229ENST00000557597 NCKAP5LQ9HCH0 1330 aa9.64□□□□□ -0.87
NUMB-229ENST00000557597 IQGAP1P46940 1657 aa9.63□□□□□ -0.87
NUMB-229ENST00000557597 HNRNPMP52272 730 aaKnown RBP eCLIP9.63□□□□□ -0.87
NUMB-229ENST00000557597 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
NUMB-229ENST00000557597 IRX6P78412 446 aaPredicted RBP9.62□□□□□ -0.87
NUMB-229ENST00000557597 DDX10Q13206 875 aaKnown RBP9.62□□□□□ -0.87
NUMB-229ENST00000557597 THEMISQ8N1K5 641 aaPredicted RBP9.62□□□□□ -0.87
NUMB-229ENST00000557597 ZNF335Q9H4Z2 1342 aaPredicted RBP9.62□□□□□ -0.87
NUMB-229ENST00000557597 KDM5AP29375 1690 aaKnown RBP9.62□□□□□ -0.87
NUMB-229ENST00000557597 NBR1Q14596 966 aa9.62□□□□□ -0.87
NUMB-229ENST00000557597 MAP3K1Q13233 1512 aa9.62□□□□□ -0.87
NUMB-229ENST00000557597 CAMSAP2Q08AD1 1489 aa9.61□□□□□ -0.87
NUMB-229ENST00000557597 UGGT1Q9NYU2 1555 aa9.61□□□□□ -0.87
NUMB-229ENST00000557597 NPHP4O75161 1426 aaPredicted RBP9.61□□□□□ -0.87
NUMB-229ENST00000557597 MIA2Q96PC5 1412 aa9.61□□□□□ -0.87
NUMB-229ENST00000557597 ANKLE2Q86XL3 938 aa9.61□□□□□ -0.87
NUMB-229ENST00000557597 GGT6Q6P531 493 aa9.59□□□□□ -0.87
NUMB-229ENST00000557597 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
NUMB-229ENST00000557597 ABCC3O15438 1527 aa9.58□□□□□ -0.88
NUMB-229ENST00000557597 CCDC136Q96JN2 1154 aa9.58□□□□□ -0.88
NUMB-229ENST00000557597 ARHGAP31Q2M1Z3 1444 aa9.58□□□□□ -0.88
NUMB-229ENST00000557597 DHX57Q6P158 1386 aaKnown RBP9.57□□□□□ -0.88
NUMB-229ENST00000557597 FANCIQ9NVI1 1328 aa9.57□□□□□ -0.88
NUMB-229ENST00000557597 SLIT1O75093 1534 aa9.57□□□□□ -0.88
NUMB-229ENST00000557597 DUOX2Q9NRD8 1548 aa9.57□□□□□ -0.88
NUMB-229ENST00000557597 ERVK-7P63135 1459 aa9.57□□□□□ -0.88
NUMB-229ENST00000557597 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
NUMB-229ENST00000557597 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
NUMB-229ENST00000557597 ARHGAP23Q9P227 1491 aa9.56□□□□□ -0.88
NUMB-229ENST00000557597 WASHC2CQ9Y4E1 1318 aa9.56□□□□□ -0.88
NUMB-229ENST00000557597 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
NUMB-229ENST00000557597 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
NUMB-229ENST00000557597 HIRIP3Q9BW71 556 aaPredicted RBP9.55□□□□□ -0.88
NUMB-229ENST00000557597 LRRC9Q6ZRR7 1453 aa9.55□□□□□ -0.88
NUMB-229ENST00000557597 KIF3BO15066 747 aa9.55□□□□□ -0.88
NUMB-229ENST00000557597 PRDM15P57071 1507 aaPredicted RBP9.55□□□□□ -0.88
NUMB-229ENST00000557597 RTN4Q9NQC3 1192 aaKnown RBP9.55□□□□□ -0.88
NUMB-229ENST00000557597 ALKQ9UM73 1620 aa9.54□□□□□ -0.88
NUMB-229ENST00000557597 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
NUMB-229ENST00000557597 ERBINQ96RT1 1412 aa9.54□□□□□ -0.88
NUMB-229ENST00000557597 SCAF11Q99590 1463 aaKnown RBP9.54□□□□□ -0.88
NUMB-229ENST00000557597 MROH1Q8NDA8 1641 aa9.54□□□□□ -0.88
NUMB-229ENST00000557597 CROCC2H7BZ55 1655 aa9.53□□□□□ -0.88
NUMB-229ENST00000557597 LMTK2Q8IWU2 1503 aa9.53□□□□□ -0.88
NUMB-229ENST00000557597 MYOM3Q5VTT5 1437 aa9.52□□□□□ -0.88
NUMB-229ENST00000557597 HSPA1LP34931 641 aa9.52□□□□□ -0.88
NUMB-229ENST00000557597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.52□□□□□ -0.893e-9■■■□□ 17.6
NUMB-229ENST00000557597 VPS8Q8N3P4 1428 aa9.51□□□□□ -0.89
NUMB-229ENST00000557597 CEP152O94986 1710 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms