RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 RNF17Q9BXT8 1623 aaKnown RBP25.59■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 PPP6R1Q9UPN7 881 aa25.58■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 KDM5DQ9BY66 1539 aa25.58■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 FAM135AQ9P2D6 1515 aa25.58■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.57■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 NCOA1Q15788 1441 aa25.57■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 RRBP1Q9P2E9 1410 aaKnown RBP25.56■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 ITGAEP38570 1179 aa25.54■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 PTPRKQ15262 1439 aa25.53■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 WASHC2CQ9Y4E1 1318 aa25.52■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 LMTK3Q96Q04 1460 aa25.52■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 PREX1Q8TCU6 1659 aa25.52■■□□□ 1.68
TVP23C-CDRT4-204ENST00000557349 ZC3H13Q5T200 1668 aaKnown RBP25.5■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 MROH1Q8NDA8 1641 aa25.5■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 PRDM15P57071 1507 aaPredicted RBP25.48■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 NPATQ14207 1427 aa25.47■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 UHRF1BP1Q6BDS2 1440 aa25.47■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 ROCK1Q13464 1354 aa25.47■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 ABCC3O15438 1527 aa25.47■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 DEPDC5O75140 1603 aa25.46■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 ANKRD50Q9ULJ7 1429 aa25.46■■□□□ 1.67
TVP23C-CDRT4-204ENST00000557349 CEP152O94986 1710 aa25.43■■□□□ 1.66
TVP23C-CDRT4-204ENST00000557349 KANK1Q14678 1352 aa25.43■■□□□ 1.66
TVP23C-CDRT4-204ENST00000557349 PZPP20742 1482 aa25.42■■□□□ 1.66
TVP23C-CDRT4-204ENST00000557349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.661e-7■□□□□ 8.3
TVP23C-CDRT4-204ENST00000557349 SETD1BQ9UPS6 1966 aaKnown RBP25.41■■□□□ 1.66
TVP23C-CDRT4-204ENST00000557349 CAMSAP1Q5T5Y3 1602 aa25.4■■□□□ 1.66
TVP23C-CDRT4-204ENST00000557349 HSPA2P54652 639 aa25.39■■□□□ 1.66
TVP23C-CDRT4-204ENST00000557349 MYO3AQ8NEV4 1616 aa25.38■■□□□ 1.65
TVP23C-CDRT4-204ENST00000557349 TNRQ92752 1358 aa25.33■■□□□ 1.65
TVP23C-CDRT4-204ENST00000557349 FBXO31Q5XUX0 539 aaPredicted RBP25.33■■□□□ 1.65
TVP23C-CDRT4-204ENST00000557349 VWDEQ8N2E2 1590 aa25.33■■□□□ 1.65
TVP23C-CDRT4-204ENST00000557349 UNC13BO14795 1591 aa25.32■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 ZNF142P52746 1687 aaPredicted RBP25.32■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 LMTK2Q8IWU2 1503 aa25.31■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 CEP170BQ9Y4F5 1589 aaPredicted RBP25.31■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 GCC2Q8IWJ2 1684 aa25.29■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 ERVK-7P63135 1459 aa25.28■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 SPATA31D1Q6ZQQ2 1576 aa25.28■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 ARHGAP31Q2M1Z3 1444 aa25.28■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 EFCAB6Q5THR3 1501 aa25.27■■□□□ 1.64
TVP23C-CDRT4-204ENST00000557349 A2ML1A8K2U0 1454 aa25.25■■□□□ 1.63
TVP23C-CDRT4-204ENST00000557349 NAIPQ13075 1403 aa25.24■■□□□ 1.63
TVP23C-CDRT4-204ENST00000557349 NLRP1Q9C000 1473 aa25.23■■□□□ 1.63
TVP23C-CDRT4-204ENST00000557349 HFM1A2PYH4 1435 aa25.23■■□□□ 1.63
TVP23C-CDRT4-204ENST00000557349 TET3O43151 1660 aa25.22■■□□□ 1.63
TVP23C-CDRT4-204ENST00000557349 IQGAP3Q86VI3 1631 aa25.21■■□□□ 1.63
TVP23C-CDRT4-204ENST00000557349 CFAP65Q6ZU64 1925 aaKnown RBP25.2■■□□□ 1.62
TVP23C-CDRT4-204ENST00000557349 NUP155O75694 1391 aa25.18■■□□□ 1.62
TVP23C-CDRT4-204ENST00000557349 RPRD2Q5VT52 1461 aaKnown RBP25.16■■□□□ 1.62
TVP23C-CDRT4-204ENST00000557349 UGGT1Q9NYU2 1555 aa25.16■■□□□ 1.62
TVP23C-CDRT4-204ENST00000557349 STRCQ7RTU9 1775 aa25.16■■□□□ 1.62
TVP23C-CDRT4-204ENST00000557349 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
TVP23C-CDRT4-204ENST00000557349 SYNMO15061 1565 aa25.11■■□□□ 1.61
TVP23C-CDRT4-204ENST00000557349 NOS1P29475 1434 aa25.11■■□□□ 1.61
TVP23C-CDRT4-204ENST00000557349 E9PCH4 1651 aa25.1■■□□□ 1.61
TVP23C-CDRT4-204ENST00000557349 DMRT2Q9Y5R5 561 aa25.1■■□□□ 1.61
TVP23C-CDRT4-204ENST00000557349 THEMISQ8N1K5 641 aaPredicted RBP25.08■■□□□ 1.61
TVP23C-CDRT4-204ENST00000557349 PIK3C2BO00750 1634 aa25.07■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 UBR1Q8IWV7 1749 aa25.06■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 TRIM52Q96A61 297 aa25.06■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 NCKAP5LQ9HCH0 1330 aa25.06■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 PKD2Q13563 968 aa25.05■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 POLR1AO95602 1720 aaPredicted RBP25.05■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 PTPRTO14522 1441 aa25.04■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 STAG3Q9UJ98 1225 aa25.04■■□□□ 1.6
TVP23C-CDRT4-204ENST00000557349 SLC52A1Q9NWF4 448 aa25.01■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 IDI1Q13907 227 aa25■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 ADGRB3O60242 1522 aa25■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 KDM5AP29375 1690 aaKnown RBP24.99■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 ANKLE2Q86XL3 938 aa24.99■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 NEURL4Q96JN8 1562 aa24.97■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 SPHKAPQ2M3C7 1700 aa24.97■■□□□ 1.59
TVP23C-CDRT4-204ENST00000557349 SLC4A1APQ9BWU0 796 aaKnown RBP24.95■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 SLIT1O75093 1534 aa24.95■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 SCAF11Q99590 1463 aaKnown RBP24.93■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 ARHGAP23Q9P227 1491 aa24.93■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 NPHP4O75161 1426 aaPredicted RBP24.92■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 RAB3GAP2Q9H2M9 1393 aa24.92■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 TMEM2Q9UHN6 1383 aa24.92■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 CHGAP10645 457 aaKnown RBP24.9■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 IQGAP1P46940 1657 aa24.9■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 TRPM2O94759 1503 aa24.9■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 MED14O60244 1454 aa24.89■■□□□ 1.58
TVP23C-CDRT4-204ENST00000557349 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.57
TVP23C-CDRT4-204ENST00000557349 MYO5BQ9ULV0 1848 aa24.87■■□□□ 1.57
TVP23C-CDRT4-204ENST00000557349 TXNDC2Q86VQ3 553 aa24.87■■□□□ 1.57
TVP23C-CDRT4-204ENST00000557349 CLTCL1P53675 1640 aa24.84■■□□□ 1.57
TVP23C-CDRT4-204ENST00000557349 LTKP29376 864 aa24.84■■□□□ 1.57
TVP23C-CDRT4-204ENST00000557349 ZNF335Q9H4Z2 1342 aaPredicted RBP24.83■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 MPHOSPH9Q99550 1183 aa24.82■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 RIMS2Q9UQ26 1411 aa24.81■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 FOXD1Q16676 465 aa24.8■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 LTBP4Q8N2S1 1624 aa24.79■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 ZFYVE9O95405 1425 aa24.79■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 PPP1R15AO75807 674 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms