RNA–Protein interactions for RNA: ENST00000557054.1

APEX1-214, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5 BASIC

Gene APEX1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-214ENST00000557054 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
APEX1-214ENST00000557054 AFAP1Q8N556 730 aa12.46□□□□□ -0.41
APEX1-214ENST00000557054 CEP170BQ9Y4F5 1589 aaPredicted RBP12.46□□□□□ -0.42
APEX1-214ENST00000557054 NPATQ14207 1427 aa12.45□□□□□ -0.42
APEX1-214ENST00000557054 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
APEX1-214ENST00000557054 CNTLNQ9NXG0 1405 aa12.44□□□□□ -0.42
APEX1-214ENST00000557054 LRRIQ1Q96JM4 1722 aa12.43□□□□□ -0.42
APEX1-214ENST00000557054 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
APEX1-214ENST00000557054 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
APEX1-214ENST00000557054 PREX2Q70Z35 1606 aa12.42□□□□□ -0.42
APEX1-214ENST00000557054 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
APEX1-214ENST00000557054 ABCC1P33527 1531 aa12.42□□□□□ -0.42
APEX1-214ENST00000557054 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
APEX1-214ENST00000557054 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■□□□□ 8.7
APEX1-214ENST00000557054 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
APEX1-214ENST00000557054 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
APEX1-214ENST00000557054 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
APEX1-214ENST00000557054 CPS1P31327 1500 aa12.38□□□□□ -0.43
APEX1-214ENST00000557054 PKD2Q13563 968 aa12.38□□□□□ -0.43
APEX1-214ENST00000557054 NEURL4Q96JN8 1562 aa12.38□□□□□ -0.43
APEX1-214ENST00000557054 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
APEX1-214ENST00000557054 CDC42BPAQ5VT25 1732 aa12.37□□□□□ -0.43
APEX1-214ENST00000557054 TOM1O60784 492 aa12.37□□□□□ -0.43
APEX1-214ENST00000557054 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
APEX1-214ENST00000557054 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
APEX1-214ENST00000557054 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
APEX1-214ENST00000557054 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
APEX1-214ENST00000557054 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
APEX1-214ENST00000557054 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
APEX1-214ENST00000557054 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
APEX1-214ENST00000557054 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
APEX1-214ENST00000557054 VWDEQ8N2E2 1590 aa12.33□□□□□ -0.44
APEX1-214ENST00000557054 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
APEX1-214ENST00000557054 CLIP1P30622 1438 aa12.32□□□□□ -0.44
APEX1-214ENST00000557054 A2ML1A8K2U0 1454 aa12.32□□□□□ -0.44
APEX1-214ENST00000557054 RNF17Q9BXT8 1623 aaKnown RBP12.31□□□□□ -0.44
APEX1-214ENST00000557054 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
APEX1-214ENST00000557054 RGS17Q9UGC6 210 aaPredicted RBP12.3□□□□□ -0.44
APEX1-214ENST00000557054 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
APEX1-214ENST00000557054 ATP7AQ04656 1500 aa12.29□□□□□ -0.44
APEX1-214ENST00000557054 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
APEX1-214ENST00000557054 CDK11AQ9UQ88 783 aaPredicted RBP12.29□□□□□ -0.44
APEX1-214ENST00000557054 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
APEX1-214ENST00000557054 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
APEX1-214ENST00000557054 IQGAP1P46940 1657 aa12.28□□□□□ -0.44
APEX1-214ENST00000557054 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
APEX1-214ENST00000557054 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
APEX1-214ENST00000557054 SYNMO15061 1565 aa12.26□□□□□ -0.45
APEX1-214ENST00000557054 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
APEX1-214ENST00000557054 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
APEX1-214ENST00000557054 DEPDC5O75140 1603 aa12.25□□□□□ -0.45
APEX1-214ENST00000557054 HAX1O00165 279 aa12.24□□□□□ -0.45
APEX1-214ENST00000557054 A2MP01023 1474 aa12.24□□□□□ -0.45
APEX1-214ENST00000557054 EVX2Q03828 476 aa12.24□□□□□ -0.45
APEX1-214ENST00000557054 GGT6Q6P531 493 aa12.23□□□□□ -0.45
APEX1-214ENST00000557054 LRRC7Q96NW7 1537 aa12.22□□□□□ -0.45
APEX1-214ENST00000557054 SPAG9O60271 1321 aaKnown RBP12.22□□□□□ -0.45
APEX1-214ENST00000557054 POTEAQ6S8J7 498 aa12.22□□□□□ -0.45
APEX1-214ENST00000557054 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
APEX1-214ENST00000557054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
APEX1-214ENST00000557054 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.45
APEX1-214ENST00000557054 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
APEX1-214ENST00000557054 ZC3H13Q5T200 1668 aaKnown RBP12.2□□□□□ -0.46
APEX1-214ENST00000557054 MED14O60244 1454 aa12.2□□□□□ -0.46
APEX1-214ENST00000557054 TNRQ92752 1358 aa12.19□□□□□ -0.46
APEX1-214ENST00000557054 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
APEX1-214ENST00000557054 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
APEX1-214ENST00000557054 HNRNPMP52272 730 aaKnown RBP eCLIP12.18□□□□□ -0.46
APEX1-214ENST00000557054 FBXO31Q5XUX0 539 aaPredicted RBP12.17□□□□□ -0.46
APEX1-214ENST00000557054 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
APEX1-214ENST00000557054 PZPP20742 1482 aa12.16□□□□□ -0.46
APEX1-214ENST00000557054 CCDC18Q5T9S5 1454 aa12.16□□□□□ -0.46
APEX1-214ENST00000557054 PRKAR2AP13861 404 aaKnown RBP12.16□□□□□ -0.46
APEX1-214ENST00000557054 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.46
APEX1-214ENST00000557054 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
APEX1-214ENST00000557054 ROBO1Q9Y6N7 1651 aa12.14□□□□□ -0.47
APEX1-214ENST00000557054 GPATCH8Q9UKJ3 1502 aaKnown RBP12.14□□□□□ -0.47
APEX1-214ENST00000557054 NLRP1Q9C000 1473 aa12.14□□□□□ -0.47
APEX1-214ENST00000557054 THEMISQ8N1K5 641 aaPredicted RBP12.12□□□□□ -0.47
APEX1-214ENST00000557054 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
APEX1-214ENST00000557054 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
APEX1-214ENST00000557054 UBR1Q8IWV7 1749 aa12.11□□□□□ -0.47
APEX1-214ENST00000557054 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
APEX1-214ENST00000557054 CFAP65Q6ZU64 1925 aaKnown RBP12.11□□□□□ -0.47
APEX1-214ENST00000557054 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
APEX1-214ENST00000557054 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
APEX1-214ENST00000557054 MIA2Q96PC5 1412 aa12.1□□□□□ -0.47
APEX1-214ENST00000557054 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
APEX1-214ENST00000557054 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
APEX1-214ENST00000557054 SRCAPQ6ZRS2 3230 aa12.06□□□□□ -0.48
APEX1-214ENST00000557054 FAM135BQ49AJ0 1406 aa12.06□□□□□ -0.48
APEX1-214ENST00000557054 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
APEX1-214ENST00000557054 CEP152O94986 1710 aa12.06□□□□□ -0.48
APEX1-214ENST00000557054 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
APEX1-214ENST00000557054 KIF3BO15066 747 aa12.05□□□□□ -0.48
APEX1-214ENST00000557054 CFDP1Q9UEE9 299 aaPredicted RBP12.05□□□□□ -0.48
APEX1-214ENST00000557054 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
APEX1-214ENST00000557054 SCAF11Q99590 1463 aaKnown RBP12.04□□□□□ -0.48
APEX1-214ENST00000557054 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
APEX1-214ENST00000557054 CCNB3Q8WWL7 1395 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms