RNA–Protein interactions for RNA: ENST00000557054.1

APEX1-214, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5 BASIC

Gene APEX1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-214ENST00000557054 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
APEX1-214ENST00000557054 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
APEX1-214ENST00000557054 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
APEX1-214ENST00000557054 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
APEX1-214ENST00000557054 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
APEX1-214ENST00000557054 FOXD1Q16676 465 aa18.37■□□□□ 0.53
APEX1-214ENST00000557054 ABCC9O60706 1549 aa17.91■□□□□ 0.46
APEX1-214ENST00000557054 POTEDQ86YR6 584 aa17.65■□□□□ 0.42
APEX1-214ENST00000557054 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
APEX1-214ENST00000557054 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
APEX1-214ENST00000557054 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
APEX1-214ENST00000557054 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
APEX1-214ENST00000557054 ADRA2BP18089 450 aa17.09■□□□□ 0.33
APEX1-214ENST00000557054 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
APEX1-214ENST00000557054 MSH5O43196 834 aa17.08■□□□□ 0.32
APEX1-214ENST00000557054 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
APEX1-214ENST00000557054 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
APEX1-214ENST00000557054 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
APEX1-214ENST00000557054 NACADO15069 1562 aa16.51■□□□□ 0.23
APEX1-214ENST00000557054 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
APEX1-214ENST00000557054 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
APEX1-214ENST00000557054 DNAJC5Q9H3Z4 198 aa16.18■□□□□ 0.18
APEX1-214ENST00000557054 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
APEX1-214ENST00000557054 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
APEX1-214ENST00000557054 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
APEX1-214ENST00000557054 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
APEX1-214ENST00000557054 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
APEX1-214ENST00000557054 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
APEX1-214ENST00000557054 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
APEX1-214ENST00000557054 ZCCHC6Q5VYS8 1495 aaKnown RBP15.67■□□□□ 0.1
APEX1-214ENST00000557054 DCAF1Q9Y4B6 1507 aa15.67■□□□□ 0.1
APEX1-214ENST00000557054 CUX2O14529 1486 aa15.61■□□□□ 0.09
APEX1-214ENST00000557054 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
APEX1-214ENST00000557054 ERCC6Q03468 1493 aa15.48■□□□□ 0.07
APEX1-214ENST00000557054 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
APEX1-214ENST00000557054 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
APEX1-214ENST00000557054 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
APEX1-214ENST00000557054 NESP48681 1621 aa15.24■□□□□ 0.03
APEX1-214ENST00000557054 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
APEX1-214ENST00000557054 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
APEX1-214ENST00000557054 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
APEX1-214ENST00000557054 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
APEX1-214ENST00000557054 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
APEX1-214ENST00000557054 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
APEX1-214ENST00000557054 SMARCA4P51532 1647 aa15.04■□□□□ -0
APEX1-214ENST00000557054 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
APEX1-214ENST00000557054 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
APEX1-214ENST00000557054 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
APEX1-214ENST00000557054 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
APEX1-214ENST00000557054 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
APEX1-214ENST00000557054 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
APEX1-214ENST00000557054 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
APEX1-214ENST00000557054 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
APEX1-214ENST00000557054 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
APEX1-214ENST00000557054 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
APEX1-214ENST00000557054 WDR62O43379 1518 aa14.84□□□□□ -0.03
APEX1-214ENST00000557054 RNF216Q9NWF9 866 aaPredicted RBP14.79□□□□□ -0.04
APEX1-214ENST00000557054 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
APEX1-214ENST00000557054 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
APEX1-214ENST00000557054 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
APEX1-214ENST00000557054 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
APEX1-214ENST00000557054 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
APEX1-214ENST00000557054 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
APEX1-214ENST00000557054 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
APEX1-214ENST00000557054 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
APEX1-214ENST00000557054 ARHGEF11O15085 1522 aa14.61□□□□□ -0.07
APEX1-214ENST00000557054 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
APEX1-214ENST00000557054 WIZO95785 1651 aa14.56□□□□□ -0.08
APEX1-214ENST00000557054 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
APEX1-214ENST00000557054 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
APEX1-214ENST00000557054 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
APEX1-214ENST00000557054 CHD1O14646 1710 aa14.47□□□□□ -0.09
APEX1-214ENST00000557054 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
APEX1-214ENST00000557054 CYB5RLQ6IPT4 315 aa14.47□□□□□ -0.09
APEX1-214ENST00000557054 CFTRP13569 1480 aa14.45□□□□□ -0.1
APEX1-214ENST00000557054 ZNF608Q9ULD9 1512 aaPredicted RBP14.45□□□□□ -0.1
APEX1-214ENST00000557054 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
APEX1-214ENST00000557054 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
APEX1-214ENST00000557054 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
APEX1-214ENST00000557054 IFT140Q96RY7 1462 aa14.37□□□□□ -0.11
APEX1-214ENST00000557054 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
APEX1-214ENST00000557054 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
APEX1-214ENST00000557054 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
APEX1-214ENST00000557054 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
APEX1-214ENST00000557054 TARBP1Q13395 1621 aaKnown RBP14.25□□□□□ -0.13
APEX1-214ENST00000557054 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.133e-9■■■□□ 17.9
APEX1-214ENST00000557054 FBLN2P98095 1184 aa14.21□□□□□ -0.13
APEX1-214ENST00000557054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.131e-8■□□□□ 10
APEX1-214ENST00000557054 DNMBPQ6XZF7 1577 aa14.2□□□□□ -0.14
APEX1-214ENST00000557054 CLASP1Q7Z460 1538 aa14.19□□□□□ -0.14
APEX1-214ENST00000557054 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
APEX1-214ENST00000557054 KCNA4P22459 653 aa14.13□□□□□ -0.15
APEX1-214ENST00000557054 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
APEX1-214ENST00000557054 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
APEX1-214ENST00000557054 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
APEX1-214ENST00000557054 SNAPC4Q5SXM2 1469 aa14.08□□□□□ -0.16
APEX1-214ENST00000557054 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
APEX1-214ENST00000557054 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
APEX1-214ENST00000557054 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
APEX1-214ENST00000557054 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms