RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
SRP54-213ENST00000556994 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
SRP54-213ENST00000556994 RGL3Q3MIN7 710 aa15.21■□□□□ 0.03
SRP54-213ENST00000556994 CDCA7LQ96GN5 454 aa15.21■□□□□ 0.03
SRP54-213ENST00000556994 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
SRP54-213ENST00000556994 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
SRP54-213ENST00000556994 NBPF1Q3BBV0 1214 aa15.19■□□□□ 0.02
SRP54-213ENST00000556994 ADCY10Q96PN6 1610 aa15.19■□□□□ 0.02
SRP54-213ENST00000556994 PLIN1O60240 522 aa15.18■□□□□ 0.02
SRP54-213ENST00000556994 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
SRP54-213ENST00000556994 ARHGEF12Q9NZN5 1544 aa15.18■□□□□ 0.02
SRP54-213ENST00000556994 CC2D1BQ5T0F9 858 aaKnown RBP15.18■□□□□ 0.02
SRP54-213ENST00000556994 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
SRP54-213ENST00000556994 CEP170Q5SW79 1584 aa15.18■□□□□ 0.02
SRP54-213ENST00000556994 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
SRP54-213ENST00000556994 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
SRP54-213ENST00000556994 KTN1Q86UP2 1357 aaKnown RBP15.16■□□□□ 0.02
SRP54-213ENST00000556994 PDE4AP27815 886 aa15.16■□□□□ 0.02
SRP54-213ENST00000556994 SKAP1Q86WV1 359 aa15.16■□□□□ 0.02
SRP54-213ENST00000556994 CARMIL2Q6F5E8 1435 aa15.15■□□□□ 0.02
SRP54-213ENST00000556994 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
SRP54-213ENST00000556994 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
SRP54-213ENST00000556994 PARD3Q8TEW0 1356 aa15.14■□□□□ 0.01
SRP54-213ENST00000556994 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
SRP54-213ENST00000556994 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
SRP54-213ENST00000556994 E9PCH4 1651 aa15.14■□□□□ 0.01
SRP54-213ENST00000556994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.016e-10■■■□□ 14.9
SRP54-213ENST00000556994 ATP10BO94823 1461 aa15.13■□□□□ 0.01
SRP54-213ENST00000556994 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
SRP54-213ENST00000556994 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
SRP54-213ENST00000556994 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
SRP54-213ENST00000556994 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
SRP54-213ENST00000556994 KDM5DQ9BY66 1539 aa15.11■□□□□ 0.01
SRP54-213ENST00000556994 PANK3Q9H999 370 aa15.11■□□□□ 0.01
SRP54-213ENST00000556994 PTPRGP23470 1445 aa15.11■□□□□ 0.01
SRP54-213ENST00000556994 PRAG1Q86YV5 1406 aa15.11■□□□□ 0.01
SRP54-213ENST00000556994 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
SRP54-213ENST00000556994 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
SRP54-213ENST00000556994 DISP3Q9P2K9 1392 aa15.1■□□□□ 0.01
SRP54-213ENST00000556994 CRBNQ96SW2 442 aa15.09■□□□□ 0.01
SRP54-213ENST00000556994 FAM135AQ9P2D6 1515 aa15.09■□□□□ 0.01
SRP54-213ENST00000556994 TRPM1Q7Z4N2 1603 aa15.08■□□□□ 0
SRP54-213ENST00000556994 TESK2Q96S53 571 aa15.08■□□□□ 0
SRP54-213ENST00000556994 ABCA8O94911 1581 aa15.07■□□□□ 0
SRP54-213ENST00000556994 C20orf194Q5TEA3 1177 aa15.06■□□□□ 0
SRP54-213ENST00000556994 NEFMP07197 916 aa15.06■□□□□ 0
SRP54-213ENST00000556994 MS4A1P11836 297 aa15.05■□□□□ 0
SRP54-213ENST00000556994 A2MP01023 1474 aa15.04■□□□□ -0
SRP54-213ENST00000556994 PLA2R1Q13018 1463 aa15.04■□□□□ -0
SRP54-213ENST00000556994 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
SRP54-213ENST00000556994 NUP160Q12769 1436 aa15.03■□□□□ -0
SRP54-213ENST00000556994 CCDC141Q6ZP82 1450 aa15.03■□□□□ -0
SRP54-213ENST00000556994 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
SRP54-213ENST00000556994 ARHGEF5Q12774 1597 aa15.02□□□□□ -0.01
SRP54-213ENST00000556994 SAMD9LQ8IVG5 1584 aa15.02□□□□□ -0.01
SRP54-213ENST00000556994 TMF1P82094 1093 aa15.01□□□□□ -0.01
SRP54-213ENST00000556994 BLMP54132 1417 aaPredicted RBP15.01□□□□□ -0.01
SRP54-213ENST00000556994 ERBINQ96RT1 1412 aa15.01□□□□□ -0.01
SRP54-213ENST00000556994 GPRASP1Q5JY77 1395 aa15.01□□□□□ -0.01
SRP54-213ENST00000556994 WASHC2CQ9Y4E1 1318 aa15□□□□□ -0.01
SRP54-213ENST00000556994 CDC42BPBQ9Y5S2 1711 aa14.99□□□□□ -0.01
SRP54-213ENST00000556994 SLC4A3P48751 1232 aa14.99□□□□□ -0.01
SRP54-213ENST00000556994 IL27Q8NEV9 243 aa14.99□□□□□ -0.01
SRP54-213ENST00000556994 PRDM15P57071 1507 aaPredicted RBP14.97□□□□□ -0.01
SRP54-213ENST00000556994 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
SRP54-213ENST00000556994 PLEKHH2Q8IVE3 1493 aa14.97□□□□□ -0.01
SRP54-213ENST00000556994 SYCP2Q9BX26 1530 aa14.97□□□□□ -0.01
SRP54-213ENST00000556994 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
SRP54-213ENST00000556994 ZMYM4Q5VZL5 1548 aa14.96□□□□□ -0.02
SRP54-213ENST00000556994 PLEKHH1Q9ULM0 1364 aa14.96□□□□□ -0.02
SRP54-213ENST00000556994 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
SRP54-213ENST00000556994 PPP2R1AP30153 589 aa14.95□□□□□ -0.02
SRP54-213ENST00000556994 WDR43Q15061 677 aaKnown RBP eCLIP14.95□□□□□ -0.02
SRP54-213ENST00000556994 MYO5CQ9NQX4 1742 aa14.95□□□□□ -0.02
SRP54-213ENST00000556994 PPM1GO15355 546 aaPredicted RBP14.94□□□□□ -0.02
SRP54-213ENST00000556994 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
SRP54-213ENST00000556994 PREX2Q70Z35 1606 aa14.94□□□□□ -0.02
SRP54-213ENST00000556994 MAGI2Q86UL8 1455 aa14.94□□□□□ -0.02
SRP54-213ENST00000556994 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
SRP54-213ENST00000556994 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
SRP54-213ENST00000556994 USP35Q9P2H5 1018 aa14.93□□□□□ -0.02
SRP54-213ENST00000556994 DDRGK1Q96HY6 314 aa14.92□□□□□ -0.02
SRP54-213ENST00000556994 INSRP06213 1382 aa14.92□□□□□ -0.02
SRP54-213ENST00000556994 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
SRP54-213ENST00000556994 UNC13BO14795 1591 aa14.91□□□□□ -0.02
SRP54-213ENST00000556994 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
SRP54-213ENST00000556994 LAMC1P11047 1609 aa14.9□□□□□ -0.02
SRP54-213ENST00000556994 RGS3P49796 1198 aa14.9□□□□□ -0.02
SRP54-213ENST00000556994 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
SRP54-213ENST00000556994 CENPQQ7L2Z9 268 aaPredicted RBP14.9□□□□□ -0.02
SRP54-213ENST00000556994 WDR7Q9Y4E6 1490 aa14.89□□□□□ -0.03
SRP54-213ENST00000556994 TTC37Q6PGP7 1564 aa14.89□□□□□ -0.03
SRP54-213ENST00000556994 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
SRP54-213ENST00000556994 EIF2AK4Q9P2K8 1649 aaKnown RBP14.88□□□□□ -0.03
SRP54-213ENST00000556994 IQGAP3Q86VI3 1631 aa14.88□□□□□ -0.03
SRP54-213ENST00000556994 NFKBIBQ15653 356 aa14.88□□□□□ -0.03
SRP54-213ENST00000556994 DAXXQ9UER7 740 aaPredicted RBP14.88□□□□□ -0.03
SRP54-213ENST00000556994 ZNF521Q96K83 1311 aa14.88□□□□□ -0.03
SRP54-213ENST00000556994 C8orf34Q49A92 452 aa14.87□□□□□ -0.03
SRP54-213ENST00000556994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.86□□□□□ -0.031e-7■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms