RNA–Protein interactions for RNA: ENST00000556555.1

NDUFB1-205, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 3

Gene NDUFB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-205ENST00000556555 CHIC2Q9UKJ5 165 aa33.68■■■□□ 2.98
NDUFB1-205ENST00000556555 RNF17Q9BXT8 1623 aaKnown RBP33.67■■■□□ 2.98
NDUFB1-205ENST00000556555 C3P01024 1663 aa33.64■■■□□ 2.98
NDUFB1-205ENST00000556555 ZMYM3Q14202 1370 aa33.63■■■□□ 2.97
NDUFB1-205ENST00000556555 KDM5DQ9BY66 1539 aa33.63■■■□□ 2.97
NDUFB1-205ENST00000556555 ROCK1Q13464 1354 aa33.62■■■□□ 2.97
NDUFB1-205ENST00000556555 CLTCQ00610 1675 aaKnown RBP33.62■■■□□ 2.97
NDUFB1-205ENST00000556555 CEBPAP49715 358 aaPredicted RBP33.62■■■□□ 2.97
NDUFB1-205ENST00000556555 PLPPR3Q6T4P5 718 aa33.62■■■□□ 2.97
NDUFB1-205ENST00000556555 NPATQ14207 1427 aa33.59■■■□□ 2.97
NDUFB1-205ENST00000556555 PTPRKQ15262 1439 aa33.59■■■□□ 2.97
NDUFB1-205ENST00000556555 WASHC2CQ9Y4E1 1318 aa33.58■■■□□ 2.97
NDUFB1-205ENST00000556555 SETD1BQ9UPS6 1966 aaKnown RBP33.58■■■□□ 2.97
NDUFB1-205ENST00000556555 ZC3H13Q5T200 1668 aaKnown RBP33.55■■■□□ 2.96
NDUFB1-205ENST00000556555 LMTK3Q96Q04 1460 aa33.54■■■□□ 2.96
NDUFB1-205ENST00000556555 MROH1Q8NDA8 1641 aa33.53■■■□□ 2.96
NDUFB1-205ENST00000556555 PRDM15P57071 1507 aaPredicted RBP33.53■■■□□ 2.96
NDUFB1-205ENST00000556555 ANKRD50Q9ULJ7 1429 aa33.53■■■□□ 2.96
NDUFB1-205ENST00000556555 PREX1Q8TCU6 1659 aa33.52■■■□□ 2.96
NDUFB1-205ENST00000556555 DEPDC5O75140 1603 aa33.5■■■□□ 2.95
NDUFB1-205ENST00000556555 ABCC3O15438 1527 aa33.49■■■□□ 2.95
NDUFB1-205ENST00000556555 UHRF1BP1Q6BDS2 1440 aa33.49■■■□□ 2.95
NDUFB1-205ENST00000556555 ITGAEP38570 1179 aa33.48■■■□□ 2.95
NDUFB1-205ENST00000556555 KANK1Q14678 1352 aa33.47■■■□□ 2.95
NDUFB1-205ENST00000556555 PZPP20742 1482 aa33.47■■■□□ 2.95
NDUFB1-205ENST00000556555 VWDEQ8N2E2 1590 aa33.38■■■□□ 2.93
NDUFB1-205ENST00000556555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.37■■■□□ 2.931e-6■■□□□ 11.9
NDUFB1-205ENST00000556555 LMTK2Q8IWU2 1503 aa33.37■■■□□ 2.93
NDUFB1-205ENST00000556555 ARHGAP31Q2M1Z3 1444 aa33.36■■■□□ 2.93
NDUFB1-205ENST00000556555 CAMSAP1Q5T5Y3 1602 aa33.35■■■□□ 2.93
NDUFB1-205ENST00000556555 CEP152O94986 1710 aa33.35■■■□□ 2.93
NDUFB1-205ENST00000556555 TNRQ92752 1358 aa33.33■■■□□ 2.93
NDUFB1-205ENST00000556555 MYO3AQ8NEV4 1616 aa33.31■■■□□ 2.92
NDUFB1-205ENST00000556555 UNC13BO14795 1591 aa33.3■■■□□ 2.92
NDUFB1-205ENST00000556555 HSPA2P54652 639 aa33.29■■■□□ 2.92
NDUFB1-205ENST00000556555 FBXO31Q5XUX0 539 aaPredicted RBP33.29■■■□□ 2.92
NDUFB1-205ENST00000556555 SPATA31D1Q6ZQQ2 1576 aa33.28■■■□□ 2.92
NDUFB1-205ENST00000556555 ZNF142P52746 1687 aaPredicted RBP33.28■■■□□ 2.92
NDUFB1-205ENST00000556555 ERVK-7P63135 1459 aa33.26■■■□□ 2.92
NDUFB1-205ENST00000556555 HFM1A2PYH4 1435 aa33.26■■■□□ 2.91
NDUFB1-205ENST00000556555 NLRP1Q9C000 1473 aa33.25■■■□□ 2.91
NDUFB1-205ENST00000556555 NAIPQ13075 1403 aa33.25■■■□□ 2.91
NDUFB1-205ENST00000556555 CEP170BQ9Y4F5 1589 aaPredicted RBP33.25■■■□□ 2.91
NDUFB1-205ENST00000556555 A2ML1A8K2U0 1454 aa33.24■■■□□ 2.91
NDUFB1-205ENST00000556555 GCC2Q8IWJ2 1684 aa33.23■■■□□ 2.91
NDUFB1-205ENST00000556555 EFCAB6Q5THR3 1501 aa33.23■■■□□ 2.91
NDUFB1-205ENST00000556555 RPRD2Q5VT52 1461 aaKnown RBP33.19■■■□□ 2.9
NDUFB1-205ENST00000556555 TET3O43151 1660 aa33.18■■■□□ 2.9
NDUFB1-205ENST00000556555 IQGAP3Q86VI3 1631 aa33.17■■■□□ 2.9
NDUFB1-205ENST00000556555 NUP155O75694 1391 aa33.16■■■□□ 2.9
NDUFB1-205ENST00000556555 PLA2R1Q13018 1463 aa33.14■■■□□ 2.9
NDUFB1-205ENST00000556555 DMRT2Q9Y5R5 561 aa33.12■■■□□ 2.89
NDUFB1-205ENST00000556555 NOS1P29475 1434 aa33.09■■■□□ 2.89
NDUFB1-205ENST00000556555 CFAP65Q6ZU64 1925 aaKnown RBP33.08■■■□□ 2.89
NDUFB1-205ENST00000556555 UGGT1Q9NYU2 1555 aa33.08■■■□□ 2.89
NDUFB1-205ENST00000556555 THEMISQ8N1K5 641 aaPredicted RBP33.07■■■□□ 2.88
NDUFB1-205ENST00000556555 STRCQ7RTU9 1775 aa33.06■■■□□ 2.88
NDUFB1-205ENST00000556555 ACIN1Q9UKV3 1341 aaKnown RBP33.04■■■□□ 2.88
NDUFB1-205ENST00000556555 PKD2Q13563 968 aa33.04■■■□□ 2.88
NDUFB1-205ENST00000556555 SLC52A1Q9NWF4 448 aa33.02■■■□□ 2.88
NDUFB1-205ENST00000556555 PTPRTO14522 1441 aa33.02■■■□□ 2.88
NDUFB1-205ENST00000556555 SYNMO15061 1565 aa33■■■□□ 2.87
NDUFB1-205ENST00000556555 E9PCH4 1651 aa32.99■■■□□ 2.87
NDUFB1-205ENST00000556555 KDM5AP29375 1690 aaKnown RBP32.96■■■□□ 2.87
NDUFB1-205ENST00000556555 UBR1Q8IWV7 1749 aa32.94■■■□□ 2.86
NDUFB1-205ENST00000556555 TRIM52Q96A61 297 aa32.94■■■□□ 2.86
NDUFB1-205ENST00000556555 IDI1Q13907 227 aa32.93■■■□□ 2.86
NDUFB1-205ENST00000556555 SETD5Q9C0A6 1442 aa32.93■■■□□ 2.86
NDUFB1-205ENST00000556555 ANKLE2Q86XL3 938 aa32.92■■■□□ 2.86
NDUFB1-205ENST00000556555 PIK3C2BO00750 1634 aa32.91■■■□□ 2.86
NDUFB1-205ENST00000556555 NCKAP5LQ9HCH0 1330 aa32.91■■■□□ 2.86
NDUFB1-205ENST00000556555 STAG3Q9UJ98 1225 aa32.9■■■□□ 2.86
NDUFB1-205ENST00000556555 POLR1AO95602 1720 aaPredicted RBP32.88■■■□□ 2.85
NDUFB1-205ENST00000556555 ADGRB3O60242 1522 aa32.87■■■□□ 2.85
NDUFB1-205ENST00000556555 SLIT1O75093 1534 aa32.87■■■□□ 2.85
NDUFB1-205ENST00000556555 ARHGAP23Q9P227 1491 aa32.86■■■□□ 2.85
NDUFB1-205ENST00000556555 SLC4A1APQ9BWU0 796 aaKnown RBP32.84■■■□□ 2.85
NDUFB1-205ENST00000556555 MED14O60244 1454 aa32.83■■■□□ 2.85
NDUFB1-205ENST00000556555 TMEM2Q9UHN6 1383 aa32.82■■■□□ 2.84
NDUFB1-205ENST00000556555 SPHKAPQ2M3C7 1700 aa32.81■■■□□ 2.84
NDUFB1-205ENST00000556555 NEURL4Q96JN8 1562 aa32.81■■■□□ 2.84
NDUFB1-205ENST00000556555 EID1Q9Y6B2 187 aa32.79■■■□□ 2.84
NDUFB1-205ENST00000556555 SCAF11Q99590 1463 aaKnown RBP32.79■■■□□ 2.84
NDUFB1-205ENST00000556555 RAB3GAP2Q9H2M9 1393 aa32.78■■■□□ 2.84
NDUFB1-205ENST00000556555 NPHP4O75161 1426 aaPredicted RBP32.77■■■□□ 2.84
NDUFB1-205ENST00000556555 HRCP23327 699 aa32.76■■■□□ 2.83
NDUFB1-205ENST00000556555 TRPM2O94759 1503 aa32.76■■■□□ 2.83
NDUFB1-205ENST00000556555 TMEM131LA2VDJ0 1609 aa32.74■■■□□ 2.83
NDUFB1-205ENST00000556555 TXNDC2Q86VQ3 553 aa32.74■■■□□ 2.83
NDUFB1-205ENST00000556555 HDGFP51858 240 aaKnown RBP32.71■■■□□ 2.83
NDUFB1-205ENST00000556555 MPHOSPH9Q99550 1183 aa32.71■■■□□ 2.83
NDUFB1-205ENST00000556555 IQGAP1P46940 1657 aa32.7■■■□□ 2.83
NDUFB1-205ENST00000556555 LTKP29376 864 aa32.69■■■□□ 2.82
NDUFB1-205ENST00000556555 CHGAP10645 457 aaKnown RBP32.67■■■□□ 2.82
NDUFB1-205ENST00000556555 ZFYVE9O95405 1425 aa32.65■■■□□ 2.82
NDUFB1-205ENST00000556555 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.64■■■□□ 2.82
NDUFB1-205ENST00000556555 RIMS2Q9UQ26 1411 aa32.63■■■□□ 2.81
NDUFB1-205ENST00000556555 CLTCL1P53675 1640 aa32.62■■■□□ 2.81
NDUFB1-205ENST00000556555 MYO5BQ9ULV0 1848 aa32.62■■■□□ 2.81
NDUFB1-205ENST00000556555 LTBP4Q8N2S1 1624 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms