RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
SLIRP-205ENST00000556310 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
SLIRP-205ENST00000556310 PREX1Q8TCU6 1659 aa17.91■□□□□ 0.46
SLIRP-205ENST00000556310 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
SLIRP-205ENST00000556310 ABCC5O15440 1437 aa17.9■□□□□ 0.46
SLIRP-205ENST00000556310 DAPK1P53355 1430 aa17.9■□□□□ 0.46
SLIRP-205ENST00000556310 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
SLIRP-205ENST00000556310 FAM135AQ9P2D6 1515 aa17.89■□□□□ 0.45
SLIRP-205ENST00000556310 RNF17Q9BXT8 1623 aaKnown RBP17.88■□□□□ 0.45
SLIRP-205ENST00000556310 ESF1Q9H501 851 aaKnown RBP17.88■□□□□ 0.45
SLIRP-205ENST00000556310 DUOX2Q9NRD8 1548 aa17.87■□□□□ 0.45
SLIRP-205ENST00000556310 SETD1BQ9UPS6 1966 aaKnown RBP17.86■□□□□ 0.45
SLIRP-205ENST00000556310 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
SLIRP-205ENST00000556310 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
SLIRP-205ENST00000556310 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
SLIRP-205ENST00000556310 GGT6Q6P531 493 aa17.83■□□□□ 0.44
SLIRP-205ENST00000556310 ZC3H13Q5T200 1668 aaKnown RBP17.83■□□□□ 0.44
SLIRP-205ENST00000556310 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
SLIRP-205ENST00000556310 KIF3BO15066 747 aa17.82■□□□□ 0.44
SLIRP-205ENST00000556310 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
SLIRP-205ENST00000556310 NPATQ14207 1427 aa17.81■□□□□ 0.44
SLIRP-205ENST00000556310 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
SLIRP-205ENST00000556310 MROH1Q8NDA8 1641 aa17.81■□□□□ 0.44
SLIRP-205ENST00000556310 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
SLIRP-205ENST00000556310 UHRF1BP1Q6BDS2 1440 aa17.8■□□□□ 0.44
SLIRP-205ENST00000556310 FAM50AQ14320 339 aaKnown RBP17.79■□□□□ 0.44
SLIRP-205ENST00000556310 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
SLIRP-205ENST00000556310 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
SLIRP-205ENST00000556310 PRDM15P57071 1507 aaPredicted RBP17.77■□□□□ 0.44
SLIRP-205ENST00000556310 MYO3AQ8NEV4 1616 aa17.77■□□□□ 0.44
SLIRP-205ENST00000556310 ABCC3O15438 1527 aa17.77■□□□□ 0.43
SLIRP-205ENST00000556310 PTPRKQ15262 1439 aa17.76■□□□□ 0.43
SLIRP-205ENST00000556310 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
SLIRP-205ENST00000556310 ZNF142P52746 1687 aaPredicted RBP17.76■□□□□ 0.43
SLIRP-205ENST00000556310 CEP152O94986 1710 aa17.75■□□□□ 0.43
SLIRP-205ENST00000556310 PPARGC1BQ86YN6 1023 aaKnown RBP17.75■□□□□ 0.43
SLIRP-205ENST00000556310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.75■□□□□ 0.43
SLIRP-205ENST00000556310 PZPP20742 1482 aa17.75■□□□□ 0.43
SLIRP-205ENST00000556310 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
SLIRP-205ENST00000556310 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
SLIRP-205ENST00000556310 WASHC2CQ9Y4E1 1318 aa17.72■□□□□ 0.43
SLIRP-205ENST00000556310 ZBTB22O15209 634 aa17.72■□□□□ 0.43
SLIRP-205ENST00000556310 HSPA2P54652 639 aa17.72■□□□□ 0.43
SLIRP-205ENST00000556310 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
SLIRP-205ENST00000556310 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
SLIRP-205ENST00000556310 CEP170BQ9Y4F5 1589 aaPredicted RBP17.7■□□□□ 0.42
SLIRP-205ENST00000556310 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
SLIRP-205ENST00000556310 VWDEQ8N2E2 1590 aa17.68■□□□□ 0.42
SLIRP-205ENST00000556310 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
SLIRP-205ENST00000556310 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
SLIRP-205ENST00000556310 SPATA31D1Q6ZQQ2 1576 aa17.66■□□□□ 0.42
SLIRP-205ENST00000556310 ANKRD50Q9ULJ7 1429 aa17.66■□□□□ 0.42
SLIRP-205ENST00000556310 TNRQ92752 1358 aa17.66■□□□□ 0.42
SLIRP-205ENST00000556310 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
SLIRP-205ENST00000556310 UNC13BO14795 1591 aa17.65■□□□□ 0.42
SLIRP-205ENST00000556310 A2ML1A8K2U0 1454 aa17.64■□□□□ 0.41
SLIRP-205ENST00000556310 KANK1Q14678 1352 aa17.64■□□□□ 0.41
SLIRP-205ENST00000556310 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
SLIRP-205ENST00000556310 ARHGAP31Q2M1Z3 1444 aa17.63■□□□□ 0.41
SLIRP-205ENST00000556310 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
SLIRP-205ENST00000556310 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
SLIRP-205ENST00000556310 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
SLIRP-205ENST00000556310 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
SLIRP-205ENST00000556310 CFAP65Q6ZU64 1925 aaKnown RBP17.6■□□□□ 0.41
SLIRP-205ENST00000556310 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
SLIRP-205ENST00000556310 GCC2Q8IWJ2 1684 aa17.59■□□□□ 0.41
SLIRP-205ENST00000556310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.417e-10■■■■□ 20.3
SLIRP-205ENST00000556310 TET3O43151 1660 aa17.58■□□□□ 0.41
SLIRP-205ENST00000556310 ITGAEP38570 1179 aa17.58■□□□□ 0.4
SLIRP-205ENST00000556310 POLR1AO95602 1720 aaPredicted RBP17.57■□□□□ 0.4
SLIRP-205ENST00000556310 IQGAP3Q86VI3 1631 aa17.57■□□□□ 0.4
SLIRP-205ENST00000556310 UGGT1Q9NYU2 1555 aa17.56■□□□□ 0.4
SLIRP-205ENST00000556310 PTPRTO14522 1441 aa17.55■□□□□ 0.4
SLIRP-205ENST00000556310 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
SLIRP-205ENST00000556310 UBR1Q8IWV7 1749 aa17.53■□□□□ 0.4
SLIRP-205ENST00000556310 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
SLIRP-205ENST00000556310 SYNMO15061 1565 aa17.52■□□□□ 0.39
SLIRP-205ENST00000556310 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
SLIRP-205ENST00000556310 NOS1P29475 1434 aa17.5■□□□□ 0.39
SLIRP-205ENST00000556310 NAIPQ13075 1403 aa17.5■□□□□ 0.39
SLIRP-205ENST00000556310 E9PCH4 1651 aa17.5■□□□□ 0.39
SLIRP-205ENST00000556310 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
SLIRP-205ENST00000556310 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
SLIRP-205ENST00000556310 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
SLIRP-205ENST00000556310 PKD2Q13563 968 aa17.49■□□□□ 0.39
SLIRP-205ENST00000556310 THEMISQ8N1K5 641 aaPredicted RBP17.47■□□□□ 0.39
SLIRP-205ENST00000556310 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
SLIRP-205ENST00000556310 NUP155O75694 1391 aa17.45■□□□□ 0.38
SLIRP-205ENST00000556310 ADGRB3O60242 1522 aa17.44■□□□□ 0.38
SLIRP-205ENST00000556310 SLIT1O75093 1534 aa17.43■□□□□ 0.38
SLIRP-205ENST00000556310 MED14O60244 1454 aa17.43■□□□□ 0.38
SLIRP-205ENST00000556310 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
SLIRP-205ENST00000556310 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
SLIRP-205ENST00000556310 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
SLIRP-205ENST00000556310 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
SLIRP-205ENST00000556310 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
SLIRP-205ENST00000556310 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
SLIRP-205ENST00000556310 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
SLIRP-205ENST00000556310 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
SLIRP-205ENST00000556310 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms